Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 AC004467.1-201ENST00000615678 330 ntBASIC-2.15□□□□□ -2.75
CCDC58Q4VC31 Y_RNA.181-201ENST00000363872 101 ntBASIC-2.16□□□□□ -2.76
CCDC58Q4VC31 Y_RNA.323-201ENST00000365157 109 ntBASIC-2.16□□□□□ -2.76
CCDC58Q4VC31 Y_RNA.378-201ENST00000365652 113 ntBASIC-2.16□□□□□ -2.76
CCDC58Q4VC31 Y_RNA.490-201ENST00000384413 102 ntBASIC-2.16□□□□□ -2.76
CCDC58Q4VC31 RNU6-831P-201ENST00000384548 107 ntBASIC-2.16□□□□□ -2.76
CCDC58Q4VC31 MIR626-201ENST00000385032 94 ntBASIC-2.16□□□□□ -2.76
CCDC58Q4VC31 MTND3P21-201ENST00000433774 331 ntBASIC-2.16□□□□□ -2.76
CCDC58Q4VC31 AC244090.1-201ENST00000441884 93 ntBASIC-2.16□□□□□ -2.76
CCDC58Q4VC31 Y_RNA.654-201ENST00000497848 106 ntBASIC-2.16□□□□□ -2.76
CCDC58Q4VC31 DLEU2_5.1-201ENST00000615567 84 ntBASIC-2.16□□□□□ -2.76
CCDC58Q4VC31 MIR6717-201ENST00000622747 73 ntBASIC-2.16□□□□□ -2.76
CCDC58Q4VC31 AC091931.1-201ENST00000623488 728 ntBASIC-2.16□□□□□ -2.76
CCDC58Q4VC31 SNORD115-28-201ENST00000363931 81 ntBASIC-2.17□□□□□ -2.76
CCDC58Q4VC31 RNU6-879P-201ENST00000364328 108 ntBASIC-2.17□□□□□ -2.76
CCDC58Q4VC31 RNU2-72P-201ENST00000411175 163 ntBASIC-2.17□□□□□ -2.76
CCDC58Q4VC31 SNX3P1X-201ENST00000414887 175 ntBASIC-2.17□□□□□ -2.76
CCDC58Q4VC31 MIR548AB-201ENST00000584917 84 ntBASIC-2.17□□□□□ -2.76
CCDC58Q4VC31 AL022161.1-201ENST00000604390 213 ntBASIC-2.17□□□□□ -2.76
CCDC58Q4VC31 AP003357.1-201ENST00000604497 148 ntBASIC-2.17□□□□□ -2.76
CCDC58Q4VC31 AC022441.3-201ENST00000605737 136 ntBASIC-2.17□□□□□ -2.76
CCDC58Q4VC31 MIR198-201ENST00000637333 62 ntBASIC-2.17□□□□□ -2.76
CCDC58Q4VC31 Y_RNA.232-201ENST00000364369 96 ntBASIC-2.18□□□□□ -2.76
CCDC58Q4VC31 Y_RNA.407-201ENST00000383986 113 ntBASIC-2.18□□□□□ -2.76
CCDC58Q4VC31 MIR29B1-201ENST00000385015 81 ntBASIC-2.18□□□□□ -2.76
CCDC58Q4VC31 SNORA26.6-201ENST00000391256 115 ntBASIC-2.18□□□□□ -2.76
CCDC58Q4VC31 MIR1285-2-201ENST00000408311 88 ntBASIC-2.18□□□□□ -2.76
CCDC58Q4VC31 MIR548K-201ENST00000408406 116 ntBASIC-2.18□□□□□ -2.76
CCDC58Q4VC31 RNU6-938P-201ENST00000411285 103 ntBASIC-2.18□□□□□ -2.76
CCDC58Q4VC31 MTATP6P13-201ENST00000438531 667 ntBASIC-2.18□□□□□ -2.76
CCDC58Q4VC31 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC-2.18□□□□□ -2.76
CCDC58Q4VC31 RNU7-74P-201ENST00000459104 62 ntBASIC-2.18□□□□□ -2.76
CCDC58Q4VC31 RNU7-96P-201ENST00000459535 64 ntBASIC-2.18□□□□□ -2.76
CCDC58Q4VC31 RNU5B-6P-201ENST00000516765 68 ntBASIC-2.18□□□□□ -2.76
CCDC58Q4VC31 Y_RNA.715-201ENST00000517082 110 ntBASIC-2.18□□□□□ -2.76
CCDC58Q4VC31 MIR6502-201ENST00000617296 76 ntBASIC-2.18□□□□□ -2.76
CCDC58Q4VC31 MIR517A-201ENST00000385001 87 ntBASIC-2.19□□□□□ -2.76
CCDC58Q4VC31 RNU6-576P-201ENST00000390854 102 ntBASIC-2.19□□□□□ -2.76
CCDC58Q4VC31 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC-2.19□□□□□ -2.76
CCDC58Q4VC31 AC127455.1-201ENST00000565496 145 ntBASIC-2.19□□□□□ -2.76
CCDC58Q4VC31 YWHAEP3-201ENST00000582767 121 ntBASIC-2.19□□□□□ -2.76
CCDC58Q4VC31 AL138960.2-201ENST00000625145 535 ntBASIC-2.19□□□□□ -2.76
CCDC58Q4VC31 RNU6-595P-201ENST00000363944 107 ntBASIC-2.2□□□□□ -2.76
CCDC58Q4VC31 RNU6-128P-201ENST00000383976 107 ntBASIC-2.2□□□□□ -2.76
CCDC58Q4VC31 Y_RNA.533-201ENST00000384596 114 ntBASIC-2.2□□□□□ -2.76
CCDC58Q4VC31 RNU6-1203P-201ENST00000410703 110 ntBASIC-2.2□□□□□ -2.76
CCDC58Q4VC31 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC-2.2□□□□□ -2.76
CCDC58Q4VC31 SNORD11-201ENST00000459124 84 ntBASIC-2.2□□□□□ -2.76
CCDC58Q4VC31 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC-2.2□□□□□ -2.76
CCDC58Q4VC31 AC055872.1-201ENST00000570978 278 ntBASIC-2.2□□□□□ -2.76
CCDC58Q4VC31 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-2.21□□□□□ -2.76
CCDC58Q4VC31 UBE2V1P7-201ENST00000446395 340 ntBASIC-2.21□□□□□ -2.76
CCDC58Q4VC31 RNU6-998P-201ENST00000515894 101 ntBASIC-2.21□□□□□ -2.76
CCDC58Q4VC31 MTND5P40-201ENST00000559945 246 ntBASIC-2.21□□□□□ -2.76
CCDC58Q4VC31 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC-2.21□□□□□ -2.76
CCDC58Q4VC31 AL353803.5-201ENST00000599815 141 ntBASIC-2.21□□□□□ -2.76
CCDC58Q4VC31 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-2.21□□□□□ -2.76
CCDC58Q4VC31 MIR6818-201ENST00000621576 65 ntBASIC-2.21□□□□□ -2.76
CCDC58Q4VC31 Y_RNA.35-201ENST00000362601 101 ntBASIC-2.22□□□□□ -2.76
CCDC58Q4VC31 Y_RNA.497-201ENST00000384447 98 ntBASIC-2.22□□□□□ -2.76
CCDC58Q4VC31 MIR601-201ENST00000385256 79 ntBASIC-2.22□□□□□ -2.76
CCDC58Q4VC31 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC-2.22□□□□□ -2.76
CCDC58Q4VC31 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC-2.22□□□□□ -2.76
CCDC58Q4VC31 AC087752.4-201ENST00000605911 462 ntBASIC-2.22□□□□□ -2.76
CCDC58Q4VC31 AC079248.2-201ENST00000623779 326 ntBASIC-2.22□□□□□ -2.76
CCDC58Q4VC31 MIR519E-201ENST00000385075 84 ntBASIC-2.23□□□□□ -2.77
CCDC58Q4VC31 AC022028.1-201ENST00000412054 408 ntBASIC-2.23□□□□□ -2.77
CCDC58Q4VC31 AL033528.1-201ENST00000453780 140 ntBASIC-2.23□□□□□ -2.77
CCDC58Q4VC31 Y_RNA.7-201ENST00000362352 102 ntBASIC-2.24□□□□□ -2.77
CCDC58Q4VC31 Y_RNA.358-201ENST00000365491 99 ntBASIC-2.24□□□□□ -2.77
CCDC58Q4VC31 RNU6-449P-201ENST00000383914 107 ntBASIC-2.24□□□□□ -2.77
CCDC58Q4VC31 Y_RNA.442-201ENST00000384131 102 ntBASIC-2.24□□□□□ -2.77
CCDC58Q4VC31 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-2.24□□□□□ -2.77
CCDC58Q4VC31 SNORA40.3-201ENST00000390964 122 ntBASIC-2.24□□□□□ -2.77
CCDC58Q4VC31 BX295541.1-201ENST00000417774 250 ntBASIC-2.24□□□□□ -2.77
CCDC58Q4VC31 RNU6-1208P-201ENST00000459588 107 ntBASIC-2.24□□□□□ -2.77
CCDC58Q4VC31 SNORA18.6-201ENST00000516792 115 ntBASIC-2.24□□□□□ -2.77
CCDC58Q4VC31 AC018638.8-201ENST00000588755 281 ntBASIC-2.24□□□□□ -2.77
CCDC58Q4VC31 DISC2.1-201ENST00000612827 205 ntBASIC-2.24□□□□□ -2.77
CCDC58Q4VC31 AC093783.1-201ENST00000612976 329 ntBASIC-2.24□□□□□ -2.77
CCDC58Q4VC31 Y_RNA.785-201ENST00000384290 109 ntBASIC-2.25□□□□□ -2.77
CCDC58Q4VC31 MIR599-201ENST00000385069 95 ntBASIC-2.25□□□□□ -2.77
CCDC58Q4VC31 MIR652-201ENST00000385278 98 ntBASIC-2.25□□□□□ -2.77
CCDC58Q4VC31 RNU6-158P-201ENST00000517104 100 ntBASIC-2.25□□□□□ -2.77
CCDC58Q4VC31 MIR548AG2-201ENST00000581228 64 ntBASIC-2.25□□□□□ -2.77
CCDC58Q4VC31 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC-2.26□□□□□ -2.77
CCDC58Q4VC31 Y_RNA.303-201ENST00000364998 94 ntBASIC-2.26□□□□□ -2.77
CCDC58Q4VC31 Y_RNA.364-201ENST00000365532 101 ntBASIC-2.26□□□□□ -2.77
CCDC58Q4VC31 RNU6-484P-201ENST00000384016 107 ntBASIC-2.26□□□□□ -2.77
CCDC58Q4VC31 RNU6-95P-201ENST00000384697 107 ntBASIC-2.26□□□□□ -2.77
CCDC58Q4VC31 MIR1278-201ENST00000408753 81 ntBASIC-2.26□□□□□ -2.77
CCDC58Q4VC31 AC023449.1-201ENST00000454464 154 ntBASIC-2.26□□□□□ -2.77
CCDC58Q4VC31 RNU7-13P-201ENST00000516413 62 ntBASIC-2.26□□□□□ -2.77
CCDC58Q4VC31 MIR4460-201ENST00000577862 86 ntBASIC-2.26□□□□□ -2.77
CCDC58Q4VC31 RNU6-38P-201ENST00000384085 107 ntBASIC-2.27□□□□□ -2.77
CCDC58Q4VC31 RNU6-318P-201ENST00000384283 103 ntBASIC-2.27□□□□□ -2.77
CCDC58Q4VC31 RNU6-592P-201ENST00000411333 103 ntBASIC-2.27□□□□□ -2.77
CCDC58Q4VC31 RNU6-436P-201ENST00000516171 114 ntBASIC-2.27□□□□□ -2.77
CCDC58Q4VC31 RNU7-115P-201ENST00000516433 55 ntBASIC-2.27□□□□□ -2.77
CCDC58Q4VC31 AC245505.1-201ENST00000556398 224 ntBASIC-2.27□□□□□ -2.77
Retrieved 100 of 98,524 protein–RNA pairs in 181.1 ms