Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 MIR4251-201ENST00000635819 61 ntBASIC1.87□□□□□ -2.11
CCDC144BQ3MJ40 RNY1P10-201ENST00000363268 113 ntBASIC1.86□□□□□ -2.11
CCDC144BQ3MJ40 RNU6-886P-201ENST00000384319 105 ntBASIC1.86□□□□□ -2.11
CCDC144BQ3MJ40 RPS29P29-201ENST00000456396 171 ntBASIC1.86□□□□□ -2.11
CCDC144BQ3MJ40 SNORA31.4-201ENST00000516049 129 ntBASIC1.86□□□□□ -2.11
CCDC144BQ3MJ40 SNORD36C-201ENST00000516733 66 ntBASIC1.86□□□□□ -2.11
CCDC144BQ3MJ40 AL645939.4-201ENST00000604495 135 ntBASIC1.86□□□□□ -2.11
CCDC144BQ3MJ40 MIR4791-201ENST00000607666 84 ntBASIC1.86□□□□□ -2.11
CCDC144BQ3MJ40 MIR8070-201ENST00000616510 88 ntBASIC1.86□□□□□ -2.11
CCDC144BQ3MJ40 AC243994.1-201ENST00000618627 109 ntBASIC1.86□□□□□ -2.11
CCDC144BQ3MJ40 Y_RNA.272-201ENST00000364696 102 ntBASIC1.85□□□□□ -2.11
CCDC144BQ3MJ40 RNU6-907P-201ENST00000390924 102 ntBASIC1.85□□□□□ -2.11
CCDC144BQ3MJ40 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.85□□□□□ -2.11
CCDC144BQ3MJ40 RNU1-98P-201ENST00000458992 160 ntBASIC1.85□□□□□ -2.11
CCDC144BQ3MJ40 RNU7-67P-201ENST00000459003 62 ntBASIC1.85□□□□□ -2.11
CCDC144BQ3MJ40 RNU7-96P-201ENST00000459535 64 ntBASIC1.85□□□□□ -2.11
CCDC144BQ3MJ40 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.85□□□□□ -2.11
CCDC144BQ3MJ40 RNU7-41P-201ENST00000515917 61 ntBASIC1.85□□□□□ -2.11
CCDC144BQ3MJ40 RNU7-53P-201ENST00000516705 60 ntBASIC1.85□□□□□ -2.11
CCDC144BQ3MJ40 MIR5197-201ENST00000583721 112 ntBASIC1.85□□□□□ -2.11
CCDC144BQ3MJ40 MIR3192-201ENST00000584920 77 ntBASIC1.85□□□□□ -2.11
CCDC144BQ3MJ40 DNAJC19P2-201ENST00000593340 302 ntBASIC1.85□□□□□ -2.11
CCDC144BQ3MJ40 MIR6844-201ENST00000637122 62 ntBASIC1.85□□□□□ -2.11
CCDC144BQ3MJ40 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.85□□□□□ -2.11
CCDC144BQ3MJ40 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
CCDC144BQ3MJ40 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.84□□□□□ -2.11
CCDC144BQ3MJ40 SNORA24-201ENST00000384096 131 ntBASIC1.84□□□□□ -2.11
CCDC144BQ3MJ40 SNORA75.5-201ENST00000391291 81 ntBASIC1.84□□□□□ -2.11
CCDC144BQ3MJ40 RNU5E-9P-201ENST00000411164 104 ntBASIC1.84□□□□□ -2.11
CCDC144BQ3MJ40 RNU7-80P-201ENST00000459562 61 ntBASIC1.84□□□□□ -2.11
CCDC144BQ3MJ40 RPS29P24-201ENST00000486345 171 ntBASIC1.84□□□□□ -2.11
CCDC144BQ3MJ40 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.84□□□□□ -2.11
CCDC144BQ3MJ40 SNORD53B-201ENST00000577887 78 ntBASIC1.84□□□□□ -2.11
CCDC144BQ3MJ40 RNU1-42P-201ENST00000364033 160 ntBASIC1.83□□□□□ -2.12
CCDC144BQ3MJ40 Y_RNA.440-201ENST00000384120 114 ntBASIC1.83□□□□□ -2.12
CCDC144BQ3MJ40 Y_RNA.454-201ENST00000384224 113 ntBASIC1.83□□□□□ -2.12
CCDC144BQ3MJ40 RNU6-768P-201ENST00000384683 107 ntBASIC1.83□□□□□ -2.12
CCDC144BQ3MJ40 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.83□□□□□ -2.12
CCDC144BQ3MJ40 AC245047.7-201ENST00000440265 293 ntBASIC1.83□□□□□ -2.12
CCDC144BQ3MJ40 Y_RNA.150-201ENST00000363562 102 ntBASIC1.82□□□□□ -2.12
CCDC144BQ3MJ40 RNU6-60P-201ENST00000364792 103 ntBASIC1.82□□□□□ -2.12
CCDC144BQ3MJ40 RNU6-997P-201ENST00000384725 107 ntBASIC1.82□□□□□ -2.12
CCDC144BQ3MJ40 snoU13.16-201ENST00000459350 104 ntBASIC1.82□□□□□ -2.12
CCDC144BQ3MJ40 Y_RNA.180-201ENST00000363867 113 ntBASIC1.81□□□□□ -2.12
CCDC144BQ3MJ40 Y_RNA.580-201ENST00000391004 95 ntBASIC1.81□□□□□ -2.12
CCDC144BQ3MJ40 SNORD37.2-201ENST00000391075 66 ntBASIC1.81□□□□□ -2.12
CCDC144BQ3MJ40 AL035398.1-201ENST00000430869 322 ntBASIC1.81□□□□□ -2.12
CCDC144BQ3MJ40 AC074198.2-201ENST00000508153 258 ntBASIC1.81□□□□□ -2.12
CCDC144BQ3MJ40 SNORA31.2-201ENST00000516019 134 ntBASIC1.81□□□□□ -2.12
CCDC144BQ3MJ40 RNU7-70P-201ENST00000516941 66 ntBASIC1.81□□□□□ -2.12
CCDC144BQ3MJ40 BX248123.2-201ENST00000606318 124 ntBASIC1.81□□□□□ -2.12
CCDC144BQ3MJ40 RNU6-818P-201ENST00000364837 108 ntBASIC1.8□□□□□ -2.12
CCDC144BQ3MJ40 Y_RNA.351-201ENST00000365436 96 ntBASIC1.8□□□□□ -2.12
CCDC144BQ3MJ40 RNU6-449P-201ENST00000383914 107 ntBASIC1.8□□□□□ -2.12
CCDC144BQ3MJ40 MIR570-201ENST00000384917 97 ntBASIC1.8□□□□□ -2.12
CCDC144BQ3MJ40 RNU11-2P-201ENST00000516898 142 ntBASIC1.8□□□□□ -2.12
CCDC144BQ3MJ40 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.8□□□□□ -2.12
CCDC144BQ3MJ40 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.8□□□□□ -2.12
CCDC144BQ3MJ40 MTND1P7-201ENST00000632801 297 ntBASIC1.8□□□□□ -2.12
CCDC144BQ3MJ40 AL161722.3-201ENST00000605789 2983 ntBASIC1.79□□□□□ -2.12
CCDC144BQ3MJ40 MIR499A-201ENST00000384903 122 ntBASIC1.79□□□□□ -2.12
CCDC144BQ3MJ40 RNU6-394P-201ENST00000410735 107 ntBASIC1.79□□□□□ -2.12
CCDC144BQ3MJ40 RPS29P23-201ENST00000458635 123 ntBASIC1.79□□□□□ -2.12
CCDC144BQ3MJ40 RNU7-73P-201ENST00000458743 63 ntBASIC1.79□□□□□ -2.12
CCDC144BQ3MJ40 AC048334.1-201ENST00000477975 159 ntBASIC1.79□□□□□ -2.12
CCDC144BQ3MJ40 RNU6-998P-201ENST00000515894 101 ntBASIC1.79□□□□□ -2.12
CCDC144BQ3MJ40 RNU6-958P-201ENST00000516995 106 ntBASIC1.79□□□□□ -2.12
CCDC144BQ3MJ40 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.79□□□□□ -2.12
CCDC144BQ3MJ40 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.79□□□□□ -2.12
CCDC144BQ3MJ40 MIR302B-201ENST00000362188 73 ntBASIC1.78□□□□□ -2.12
CCDC144BQ3MJ40 RNA5SP264-201ENST00000363115 107 ntBASIC1.78□□□□□ -2.12
CCDC144BQ3MJ40 SNORD26-201ENST00000384147 75 ntBASIC1.78□□□□□ -2.12
CCDC144BQ3MJ40 Y_RNA.464-201ENST00000384282 110 ntBASIC1.78□□□□□ -2.12
CCDC144BQ3MJ40 Y_RNA.494-201ENST00000384432 111 ntBASIC1.78□□□□□ -2.12
CCDC144BQ3MJ40 MIR320A-201ENST00000385302 82 ntBASIC1.78□□□□□ -2.12
CCDC144BQ3MJ40 PCNPP3-201ENST00000393579 471 ntBASIC1.78□□□□□ -2.12
CCDC144BQ3MJ40 AC009474.2-201ENST00000451383 136 ntBASIC1.78□□□□□ -2.12
CCDC144BQ3MJ40 PRELID3BP2-201ENST00000605362 201 ntBASIC1.78□□□□□ -2.12
CCDC144BQ3MJ40 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.78□□□□□ -2.12
CCDC144BQ3MJ40 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
CCDC144BQ3MJ40 SNORA67.6-201ENST00000391093 99 ntBASIC1.77□□□□□ -2.13
CCDC144BQ3MJ40 MIR1323-201ENST00000408090 73 ntBASIC1.77□□□□□ -2.13
CCDC144BQ3MJ40 SNORA70.22-201ENST00000517160 124 ntBASIC1.77□□□□□ -2.13
CCDC144BQ3MJ40 AC131055.1-201ENST00000584626 316 ntBASIC1.77□□□□□ -2.13
CCDC144BQ3MJ40 MIR7111-201ENST00000619751 72 ntBASIC1.77□□□□□ -2.13
CCDC144BQ3MJ40 MIR103A2-201ENST00000362154 78 ntBASIC1.76□□□□□ -2.13
CCDC144BQ3MJ40 SNORA25.9-201ENST00000365087 128 ntBASIC1.76□□□□□ -2.13
CCDC144BQ3MJ40 Y_RNA.327-201ENST00000365201 102 ntBASIC1.76□□□□□ -2.13
CCDC144BQ3MJ40 MIR517C-201ENST00000385103 95 ntBASIC1.76□□□□□ -2.13
CCDC144BQ3MJ40 RNA5SP261-201ENST00000410536 106 ntBASIC1.76□□□□□ -2.13
CCDC144BQ3MJ40 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.76□□□□□ -2.13
CCDC144BQ3MJ40 SNORA80D-201ENST00000384488 135 ntBASIC1.75□□□□□ -2.13
CCDC144BQ3MJ40 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.75□□□□□ -2.13
CCDC144BQ3MJ40 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.75□□□□□ -2.13
CCDC144BQ3MJ40 AP003716.2-201ENST00000528260 108 ntBASIC1.75□□□□□ -2.13
CCDC144BQ3MJ40 MIR3144-201ENST00000579460 79 ntBASIC1.75□□□□□ -2.13
CCDC144BQ3MJ40 SNORA7.1-201ENST00000363750 139 ntBASIC1.74□□□□□ -2.13
CCDC144BQ3MJ40 SNORD12-201ENST00000391002 90 ntBASIC1.74□□□□□ -2.13
CCDC144BQ3MJ40 RNU2-11P-201ENST00000459191 187 ntBASIC1.74□□□□□ -2.13
CCDC144BQ3MJ40 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms