Protein–RNA interactions for Protein: Q12947

FOXF2, Forkhead box protein F2, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF2Q12947 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.85□□□□□ -2.11
FOXF2Q12947 AC062037.1-201ENST00000605302 128 ntBASIC1.85□□□□□ -2.11
FOXF2Q12947 SNORA28-201ENST00000606769 126 ntBASIC1.85□□□□□ -2.11
FOXF2Q12947 Y_RNA.783-201ENST00000613546 102 ntBASIC1.85□□□□□ -2.11
FOXF2Q12947 Y_RNA.93-201ENST00000363066 109 ntBASIC1.84□□□□□ -2.11
FOXF2Q12947 Y_RNA.107-201ENST00000363190 121 ntBASIC1.84□□□□□ -2.11
FOXF2Q12947 SNORA6-201ENST00000384033 151 ntBASIC1.84□□□□□ -2.11
FOXF2Q12947 RNA5SP501-201ENST00000410990 112 ntBASIC1.84□□□□□ -2.11
FOXF2Q12947 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.84□□□□□ -2.11
FOXF2Q12947 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.84□□□□□ -2.11
FOXF2Q12947 RNU7-193P-201ENST00000516723 65 ntBASIC1.84□□□□□ -2.11
FOXF2Q12947 RNA5SP437-201ENST00000517249 129 ntBASIC1.84□□□□□ -2.11
FOXF2Q12947 DEFB131E-201ENST00000532329 154 ntBASIC1.84□□□□□ -2.11
FOXF2Q12947 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.84□□□□□ -2.12
FOXF2Q12947 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.83□□□□□ -2.12
FOXF2Q12947 RNY3P2-201ENST00000362918 102 ntBASIC1.83□□□□□ -2.12
FOXF2Q12947 RNU4-36P-201ENST00000364294 144 ntBASIC1.83□□□□□ -2.12
FOXF2Q12947 RNU6-424P-201ENST00000384367 105 ntBASIC1.83□□□□□ -2.12
FOXF2Q12947 Y_RNA.494-201ENST00000384432 111 ntBASIC1.83□□□□□ -2.12
FOXF2Q12947 RNA5SP465-201ENST00000391195 109 ntBASIC1.83□□□□□ -2.12
FOXF2Q12947 U8.16-201ENST00000391279 133 ntBASIC1.83□□□□□ -2.12
FOXF2Q12947 RNA5SP144-201ENST00000410846 116 ntBASIC1.83□□□□□ -2.12
FOXF2Q12947 RNA5SP270-201ENST00000411361 118 ntBASIC1.83□□□□□ -2.12
FOXF2Q12947 AL022718.1-201ENST00000412004 84 ntBASIC1.83□□□□□ -2.12
FOXF2Q12947 AC015922.2-201ENST00000435593 184 ntBASIC1.83□□□□□ -2.12
FOXF2Q12947 RNU7-96P-201ENST00000459535 64 ntBASIC1.83□□□□□ -2.12
FOXF2Q12947 AC107297.1-201ENST00000459991 176 ntBASIC1.83□□□□□ -2.12
FOXF2Q12947 RNU6-998P-201ENST00000515894 101 ntBASIC1.83□□□□□ -2.12
FOXF2Q12947 AC090821.2-201ENST00000523552 176 ntBASIC1.83□□□□□ -2.12
FOXF2Q12947 AC027279.3-201ENST00000625055 122 ntBASIC1.83□□□□□ -2.12
FOXF2Q12947 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.82□□□□□ -2.12
FOXF2Q12947 RNA5SP173-201ENST00000364857 136 ntBASIC1.82□□□□□ -2.12
FOXF2Q12947 Y_RNA.342-201ENST00000365352 113 ntBASIC1.82□□□□□ -2.12
FOXF2Q12947 Y_RNA.507-201ENST00000384500 99 ntBASIC1.82□□□□□ -2.12
FOXF2Q12947 SNORA48.1-201ENST00000390879 135 ntBASIC1.82□□□□□ -2.12
FOXF2Q12947 AL512326.2-201ENST00000426359 151 ntBASIC1.82□□□□□ -2.12
FOXF2Q12947 snoU13.23-201ENST00000458863 104 ntBASIC1.82□□□□□ -2.12
FOXF2Q12947 RPS23P4-201ENST00000487908 423 ntBASIC1.82□□□□□ -2.12
FOXF2Q12947 RPL23AP63-201ENST00000498752 471 ntBASIC1.82□□□□□ -2.12
FOXF2Q12947 AC113410.1-201ENST00000505029 247 ntBASIC1.82□□□□□ -2.12
FOXF2Q12947 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.82□□□□□ -2.12
FOXF2Q12947 SNORA31.4-201ENST00000516049 129 ntBASIC1.82□□□□□ -2.12
FOXF2Q12947 SCARNA23-201ENST00000516060 130 ntBASIC1.82□□□□□ -2.12
FOXF2Q12947 IGLV3-17-201ENST00000519099 244 ntBASIC1.82□□□□□ -2.12
FOXF2Q12947 AC004812.1-201ENST00000540773 146 ntBASIC1.82□□□□□ -2.12
FOXF2Q12947 MIR5694-201ENST00000581190 76 ntBASIC1.82□□□□□ -2.12
FOXF2Q12947 AL513534.2-201ENST00000603836 250 ntBASIC1.82□□□□□ -2.12
FOXF2Q12947 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.82□□□□□ -2.12
FOXF2Q12947 AC087741.2-201ENST00000619415 172 ntBASIC1.82□□□□□ -2.12
FOXF2Q12947 AC021613.1-201ENST00000623880 111 ntBASIC1.82□□□□□ -2.12
FOXF2Q12947 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
FOXF2Q12947 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.82□□□□□ -2.12
FOXF2Q12947 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.82□□□□□ -2.12
FOXF2Q12947 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
FOXF2Q12947 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
FOXF2Q12947 SNORD115-34-201ENST00000362441 82 ntBASIC1.81□□□□□ -2.12
FOXF2Q12947 SNORD115-12-201ENST00000362583 82 ntBASIC1.81□□□□□ -2.12
FOXF2Q12947 SNORD115-29-201ENST00000362834 82 ntBASIC1.81□□□□□ -2.12
FOXF2Q12947 SNORD115-9-201ENST00000362912 82 ntBASIC1.81□□□□□ -2.12
FOXF2Q12947 SNORD115-21-201ENST00000362963 81 ntBASIC1.81□□□□□ -2.12
FOXF2Q12947 SNORD115-14-201ENST00000363090 81 ntBASIC1.81□□□□□ -2.12
FOXF2Q12947 SNORD115-13-201ENST00000363358 82 ntBASIC1.81□□□□□ -2.12
FOXF2Q12947 SNORD115-41-201ENST00000363608 82 ntBASIC1.81□□□□□ -2.12
FOXF2Q12947 SNORD115-11-201ENST00000363616 82 ntBASIC1.81□□□□□ -2.12
FOXF2Q12947 SNORD115-5-201ENST00000363633 82 ntBASIC1.81□□□□□ -2.12
FOXF2Q12947 SNORD115-39-201ENST00000363694 82 ntBASIC1.81□□□□□ -2.12
FOXF2Q12947 SNORD115-4-201ENST00000363810 82 ntBASIC1.81□□□□□ -2.12
FOXF2Q12947 SNORD115-16-201ENST00000363887 82 ntBASIC1.81□□□□□ -2.12
FOXF2Q12947 SNORD115-6-201ENST00000363942 82 ntBASIC1.81□□□□□ -2.12
FOXF2Q12947 SNORD115-42-201ENST00000364273 82 ntBASIC1.81□□□□□ -2.12
FOXF2Q12947 SNORD115-15-201ENST00000364809 81 ntBASIC1.81□□□□□ -2.12
FOXF2Q12947 SNORD115-1-201ENST00000364961 82 ntBASIC1.81□□□□□ -2.12
FOXF2Q12947 SNORD115-26-201ENST00000365067 82 ntBASIC1.81□□□□□ -2.12
FOXF2Q12947 SNORD115-10-201ENST00000365073 81 ntBASIC1.81□□□□□ -2.12
FOXF2Q12947 SNORD115-43-201ENST00000365503 82 ntBASIC1.81□□□□□ -2.12
FOXF2Q12947 SNORD115-36-201ENST00000365629 82 ntBASIC1.81□□□□□ -2.12
FOXF2Q12947 Y_RNA.531-201ENST00000384589 121 ntBASIC1.81□□□□□ -2.12
FOXF2Q12947 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
FOXF2Q12947 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
FOXF2Q12947 MIR1267-201ENST00000408723 78 ntBASIC1.81□□□□□ -2.12
FOXF2Q12947 RNU2-7P-201ENST00000410794 178 ntBASIC1.81□□□□□ -2.12
FOXF2Q12947 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.81□□□□□ -2.12
FOXF2Q12947 AC069257.2-201ENST00000441819 155 ntBASIC1.81□□□□□ -2.12
FOXF2Q12947 PGBD4P5-201ENST00000445958 426 ntBASIC1.81□□□□□ -2.12
FOXF2Q12947 RNA5SP168-201ENST00000516642 112 ntBASIC1.81□□□□□ -2.12
FOXF2Q12947 RNU7-181P-201ENST00000517234 74 ntBASIC1.81□□□□□ -2.12
FOXF2Q12947 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.81□□□□□ -2.12
FOXF2Q12947 AC121758.2-201ENST00000553271 193 ntBASIC1.81□□□□□ -2.12
FOXF2Q12947 AC015712.3-201ENST00000559380 164 ntBASIC1.81□□□□□ -2.12
FOXF2Q12947 SUB1P4-201ENST00000566062 339 ntBASIC1.81□□□□□ -2.12
FOXF2Q12947 MIR4769-201ENST00000584126 77 ntBASIC1.81□□□□□ -2.12
FOXF2Q12947 MIR5002-201ENST00000584713 97 ntBASIC1.81□□□□□ -2.12
FOXF2Q12947 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.81□□□□□ -2.12
FOXF2Q12947 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.81□□□□□ -2.12
FOXF2Q12947 AP006437.1-201ENST00000641440 3685 ntBASIC1.81□□□□□ -2.12
FOXF2Q12947 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
FOXF2Q12947 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC1.81□□□□□ -2.12
FOXF2Q12947 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
FOXF2Q12947 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
FOXF2Q12947 AL596028.1-201ENST00000326971 197 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 172.9 ms