Protein–RNA interactions for Protein: Q12946

FOXF1, Forkhead box protein F1, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1Q12946 MIR106A-201ENST00000384870 81 ntBASIC0.04□□□□□ -2.4
FOXF1Q12946 MIR548A2-201ENST00000384956 97 ntBASIC0.04□□□□□ -2.4
FOXF1Q12946 MIR518F-201ENST00000384973 87 ntBASIC0.04□□□□□ -2.4
FOXF1Q12946 PCNPP3-201ENST00000393579 471 ntBASIC0.04□□□□□ -2.4
FOXF1Q12946 RNU6-602P-201ENST00000411155 105 ntBASIC0.04□□□□□ -2.4
FOXF1Q12946 AC096949.1-201ENST00000412047 152 ntBASIC0.04□□□□□ -2.4
FOXF1Q12946 AC073261.1-201ENST00000429409 121 ntBASIC0.04□□□□□ -2.4
FOXF1Q12946 RNU6-976P-201ENST00000516086 111 ntBASIC0.04□□□□□ -2.4
FOXF1Q12946 RNU2-31P-201ENST00000516954 155 ntBASIC0.04□□□□□ -2.4
FOXF1Q12946 RNU6-448P-201ENST00000517052 107 ntBASIC0.04□□□□□ -2.4
FOXF1Q12946 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC0.04□□□□□ -2.4
FOXF1Q12946 MIR5688-201ENST00000580619 83 ntBASIC0.04□□□□□ -2.4
FOXF1Q12946 AC092447.9-201ENST00000603395 144 ntBASIC0.04□□□□□ -2.4
FOXF1Q12946 C8orf59P2-201ENST00000603441 271 ntBASIC0.04□□□□□ -2.4
FOXF1Q12946 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.04□□□□□ -2.4
FOXF1Q12946 Y_RNA.105-201ENST00000363182 111 ntBASIC0.03□□□□□ -2.4
FOXF1Q12946 RNU6-1205P-201ENST00000363625 106 ntBASIC0.03□□□□□ -2.4
FOXF1Q12946 SNORD114-9-201ENST00000364370 72 ntBASIC0.03□□□□□ -2.4
FOXF1Q12946 SNORD61-201ENST00000384252 73 ntBASIC0.03□□□□□ -2.4
FOXF1Q12946 Y_RNA.567-201ENST00000384736 106 ntBASIC0.03□□□□□ -2.4
FOXF1Q12946 RPS29P24-201ENST00000486345 171 ntBASIC0.03□□□□□ -2.4
FOXF1Q12946 FGF7P4-201ENST00000509595 295 ntBASIC0.03□□□□□ -2.4
FOXF1Q12946 RNU6-848P-201ENST00000515948 107 ntBASIC0.03□□□□□ -2.4
FOXF1Q12946 RNU6-617P-201ENST00000516147 107 ntBASIC0.03□□□□□ -2.4
FOXF1Q12946 RNU6-473P-201ENST00000516164 107 ntBASIC0.03□□□□□ -2.4
FOXF1Q12946 RNU6-764P-201ENST00000516396 105 ntBASIC0.03□□□□□ -2.4
FOXF1Q12946 RNU6-1049P-201ENST00000516414 107 ntBASIC0.03□□□□□ -2.4
FOXF1Q12946 AC131281.1-201ENST00000522984 164 ntBASIC0.03□□□□□ -2.4
FOXF1Q12946 AC112693.2-201ENST00000556538 232 ntBASIC0.03□□□□□ -2.4
FOXF1Q12946 AC122108.2-201ENST00000611946 526 ntBASIC0.03□□□□□ -2.4
FOXF1Q12946 AP001282.2-201ENST00000616149 309 ntBASIC0.03□□□□□ -2.4
FOXF1Q12946 MIR376A2-201ENST00000636782 80 ntBASIC0.03□□□□□ -2.4
FOXF1Q12946 MIR330-201ENST00000362196 94 ntBASIC0.02□□□□□ -2.41
FOXF1Q12946 MIR342-201ENST00000362212 99 ntBASIC0.02□□□□□ -2.41
FOXF1Q12946 MIR411-201ENST00000362239 96 ntBASIC0.02□□□□□ -2.41
FOXF1Q12946 Y_RNA.58-201ENST00000362807 102 ntBASIC0.02□□□□□ -2.41
FOXF1Q12946 RNA5SP214-201ENST00000363378 118 ntBASIC0.02□□□□□ -2.41
FOXF1Q12946 Y_RNA.142-201ENST00000363491 102 ntBASIC0.02□□□□□ -2.41
FOXF1Q12946 Y_RNA.154-201ENST00000363624 102 ntBASIC0.02□□□□□ -2.41
FOXF1Q12946 RNA5SP245-201ENST00000364239 121 ntBASIC0.02□□□□□ -2.41
FOXF1Q12946 SNORA1.1-201ENST00000364671 133 ntBASIC0.02□□□□□ -2.41
FOXF1Q12946 RNY3P1-201ENST00000365085 102 ntBASIC0.02□□□□□ -2.41
FOXF1Q12946 Y_RNA.380-201ENST00000365663 111 ntBASIC0.02□□□□□ -2.41
FOXF1Q12946 Y_RNA.471-201ENST00000384312 102 ntBASIC0.02□□□□□ -2.41
FOXF1Q12946 SNORA27-201ENST00000384323 126 ntBASIC0.02□□□□□ -2.41
FOXF1Q12946 MIR643-201ENST00000385267 97 ntBASIC0.02□□□□□ -2.41
FOXF1Q12946 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC0.02□□□□□ -2.41
FOXF1Q12946 RNU2-59P-201ENST00000410482 191 ntBASIC0.02□□□□□ -2.41
FOXF1Q12946 AC138393.2-201ENST00000414742 246 ntBASIC0.02□□□□□ -2.41
FOXF1Q12946 MTCO1P5-201ENST00000433573 344 ntBASIC0.02□□□□□ -2.41
FOXF1Q12946 AF228730.3-201ENST00000436691 102 ntBASIC0.02□□□□□ -2.41
FOXF1Q12946 MTND4LP30-201ENST00000454092 297 ntBASIC0.02□□□□□ -2.41
FOXF1Q12946 RNU7-96P-201ENST00000459535 64 ntBASIC0.02□□□□□ -2.41
FOXF1Q12946 RNU6-397P-201ENST00000516226 104 ntBASIC0.02□□□□□ -2.41
FOXF1Q12946 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.02□□□□□ -2.41
FOXF1Q12946 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC0.02□□□□□ -2.41
FOXF1Q12946 MIR4768-201ENST00000585270 74 ntBASIC0.02□□□□□ -2.41
FOXF1Q12946 AC104408.1-201ENST00000605241 170 ntBASIC0.02□□□□□ -2.41
FOXF1Q12946 AL133255.1-201ENST00000606374 441 ntBASIC0.02□□□□□ -2.41
FOXF1Q12946 AC013791.1-201ENST00000616619 62 ntBASIC0.02□□□□□ -2.41
FOXF1Q12946 AC007485.1-201ENST00000616755 206 ntBASIC0.02□□□□□ -2.41
FOXF1Q12946 MIR8066-201ENST00000617280 78 ntBASIC0.02□□□□□ -2.41
FOXF1Q12946 MIR499B-201ENST00000636498 73 ntBASIC0.02□□□□□ -2.41
FOXF1Q12946 Y_RNA.7-201ENST00000362352 102 ntBASIC0.01□□□□□ -2.41
FOXF1Q12946 Y_RNA.14-201ENST00000362415 103 ntBASIC0.01□□□□□ -2.41
FOXF1Q12946 Y_RNA.37-201ENST00000362606 108 ntBASIC0.01□□□□□ -2.41
FOXF1Q12946 RNU6-888P-201ENST00000363010 101 ntBASIC0.01□□□□□ -2.41
FOXF1Q12946 SNORD114-16-201ENST00000363044 70 ntBASIC0.01□□□□□ -2.41
FOXF1Q12946 RNA5SP117-201ENST00000365294 118 ntBASIC0.01□□□□□ -2.41
FOXF1Q12946 Y_RNA.423-201ENST00000384057 113 ntBASIC0.01□□□□□ -2.41
FOXF1Q12946 Y_RNA.602-201ENST00000410535 92 ntBASIC0.01□□□□□ -2.41
FOXF1Q12946 AL358176.2-201ENST00000425769 204 ntBASIC0.01□□□□□ -2.41
FOXF1Q12946 SUMO1P3-201ENST00000439961 304 ntBASIC0.01□□□□□ -2.41
FOXF1Q12946 Y_RNA.632-201ENST00000459189 102 ntBASIC0.01□□□□□ -2.41
FOXF1Q12946 Y_RNA.631-201ENST00000459607 101 ntBASIC0.01□□□□□ -2.41
FOXF1Q12946 RNU6-693P-201ENST00000516134 107 ntBASIC0.01□□□□□ -2.41
FOXF1Q12946 RNU6-135P-201ENST00000516769 101 ntBASIC0.01□□□□□ -2.41
FOXF1Q12946 RNA5SP480-201ENST00000516840 109 ntBASIC0.01□□□□□ -2.41
FOXF1Q12946 RNU6-1270P-201ENST00000517128 108 ntBASIC0.01□□□□□ -2.41
FOXF1Q12946 AP003733.2-201ENST00000529409 171 ntBASIC0.01□□□□□ -2.41
FOXF1Q12946 AL132765.2-201ENST00000610812 351 ntBASIC0.01□□□□□ -2.41
FOXF1Q12946 MIR7107-201ENST00000611489 80 ntBASIC0.01□□□□□ -2.41
FOXF1Q12946 Clostridiales-1.4-201ENST00000636807 150 ntBASIC0.01□□□□□ -2.41
FOXF1Q12946 Y_RNA.13-201ENST00000362403 112 ntBASIC0□□□□□ -2.41
FOXF1Q12946 Y_RNA.26-201ENST00000362539 101 ntBASIC0□□□□□ -2.41
FOXF1Q12946 SNORD113-8-201ENST00000363497 74 ntBASIC0□□□□□ -2.41
FOXF1Q12946 Y_RNA.315-201ENST00000365117 102 ntBASIC0□□□□□ -2.41
FOXF1Q12946 SNORA63.7-201ENST00000365579 123 ntBASIC0□□□□□ -2.41
FOXF1Q12946 RNU6-662P-201ENST00000384253 104 ntBASIC0□□□□□ -2.41
FOXF1Q12946 MIR215-201ENST00000384858 110 ntBASIC0□□□□□ -2.41
FOXF1Q12946 MIR526A2-201ENST00000390198 65 ntBASIC0□□□□□ -2.41
FOXF1Q12946 RNU6-127P-201ENST00000390897 107 ntBASIC0□□□□□ -2.41
FOXF1Q12946 U8.15-201ENST00000390947 134 ntBASIC0□□□□□ -2.41
FOXF1Q12946 RNU6-1228P-201ENST00000391014 107 ntBASIC0□□□□□ -2.41
FOXF1Q12946 SNORD77.3-201ENST00000391113 65 ntBASIC0□□□□□ -2.41
FOXF1Q12946 RNA5SP63-201ENST00000391225 112 ntBASIC0□□□□□ -2.41
FOXF1Q12946 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0□□□□□ -2.41
FOXF1Q12946 RNU6-121P-201ENST00000410525 99 ntBASIC0□□□□□ -2.41
FOXF1Q12946 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0□□□□□ -2.41
FOXF1Q12946 HSPE1P25-201ENST00000455484 251 ntBASIC0□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms