Protein–RNA interactions for Protein: Q12860

CNTN1, Contactin-1, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN1Q12860 RNU2-55P-201ENST00000411146 174 ntBASIC0.8□□□□□ -2.28
CNTN1Q12860 RNU6-938P-201ENST00000411285 103 ntBASIC0.8□□□□□ -2.28
CNTN1Q12860 RNU6-1299P-201ENST00000516316 100 ntBASIC0.8□□□□□ -2.28
CNTN1Q12860 RNA5SP255-201ENST00000516370 107 ntBASIC0.8□□□□□ -2.28
CNTN1Q12860 RNU6-453P-201ENST00000516819 85 ntBASIC0.8□□□□□ -2.28
CNTN1Q12860 RNU6-1270P-201ENST00000517128 108 ntBASIC0.8□□□□□ -2.28
CNTN1Q12860 MIR4643-201ENST00000577473 78 ntBASIC0.8□□□□□ -2.28
CNTN1Q12860 MIR5000-201ENST00000577717 103 ntBASIC0.8□□□□□ -2.28
CNTN1Q12860 RNU6-94P-201ENST00000607728 107 ntBASIC0.8□□□□□ -2.28
CNTN1Q12860 MIR6515-201ENST00000619843 57 ntBASIC0.8□□□□□ -2.28
CNTN1Q12860 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.79□□□□□ -2.28
CNTN1Q12860 Y_RNA.37-201ENST00000362606 108 ntBASIC0.79□□□□□ -2.28
CNTN1Q12860 Y_RNA.66-201ENST00000362862 102 ntBASIC0.79□□□□□ -2.28
CNTN1Q12860 RNU6-888P-201ENST00000363010 101 ntBASIC0.79□□□□□ -2.28
CNTN1Q12860 Y_RNA.91-201ENST00000363042 107 ntBASIC0.79□□□□□ -2.28
CNTN1Q12860 SNORD113.3-201ENST00000364630 78 ntBASIC0.79□□□□□ -2.28
CNTN1Q12860 RNU1-36P-201ENST00000365130 165 ntBASIC0.79□□□□□ -2.28
CNTN1Q12860 RNY3P5-201ENST00000384127 102 ntBASIC0.79□□□□□ -2.28
CNTN1Q12860 MIR616-201ENST00000385293 97 ntBASIC0.79□□□□□ -2.28
CNTN1Q12860 SNORD111-201ENST00000408139 94 ntBASIC0.79□□□□□ -2.28
CNTN1Q12860 RNU2-38P-201ENST00000410856 79 ntBASIC0.79□□□□□ -2.28
CNTN1Q12860 RPS3AP1-201ENST00000413190 320 ntBASIC0.79□□□□□ -2.28
CNTN1Q12860 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.79□□□□□ -2.28
CNTN1Q12860 RNU6-504P-201ENST00000516568 104 ntBASIC0.79□□□□□ -2.28
CNTN1Q12860 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.79□□□□□ -2.28
CNTN1Q12860 AP000942.4-201ENST00000604811 241 ntBASIC0.79□□□□□ -2.28
CNTN1Q12860 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.78□□□□□ -2.28
CNTN1Q12860 Y_RNA.54-201ENST00000362766 105 ntBASIC0.78□□□□□ -2.28
CNTN1Q12860 Y_RNA.277-201ENST00000364754 102 ntBASIC0.78□□□□□ -2.28
CNTN1Q12860 Y_RNA.634-201ENST00000364811 113 ntBASIC0.78□□□□□ -2.28
CNTN1Q12860 Y_RNA.416-201ENST00000384014 113 ntBASIC0.78□□□□□ -2.28
CNTN1Q12860 Y_RNA.432-201ENST00000384087 111 ntBASIC0.78□□□□□ -2.28
CNTN1Q12860 SNORA2B-201ENST00000384583 137 ntBASIC0.78□□□□□ -2.28
CNTN1Q12860 SNORA40.5-201ENST00000391061 128 ntBASIC0.78□□□□□ -2.28
CNTN1Q12860 SNORA26-201ENST00000391286 122 ntBASIC0.78□□□□□ -2.28
CNTN1Q12860 AL606845.1-201ENST00000404881 255 ntBASIC0.78□□□□□ -2.28
CNTN1Q12860 RNU2-70P-201ENST00000410718 179 ntBASIC0.78□□□□□ -2.28
CNTN1Q12860 Y_RNA.622-201ENST00000411091 108 ntBASIC0.78□□□□□ -2.28
CNTN1Q12860 RNU7-67P-201ENST00000459003 62 ntBASIC0.78□□□□□ -2.28
CNTN1Q12860 RNA5SP436-201ENST00000516020 115 ntBASIC0.78□□□□□ -2.28
CNTN1Q12860 RNU6-351P-201ENST00000516097 100 ntBASIC0.78□□□□□ -2.28
CNTN1Q12860 ACA64.5-201ENST00000516207 127 ntBASIC0.78□□□□□ -2.28
CNTN1Q12860 RNU6-327P-201ENST00000516270 127 ntBASIC0.78□□□□□ -2.28
CNTN1Q12860 SNORA18.4-201ENST00000516440 124 ntBASIC0.78□□□□□ -2.28
CNTN1Q12860 SNORD36C-201ENST00000516733 66 ntBASIC0.78□□□□□ -2.28
CNTN1Q12860 AP003484.1-201ENST00000530974 250 ntBASIC0.78□□□□□ -2.28
CNTN1Q12860 RNU6-653P-201ENST00000363074 106 ntBASIC0.77□□□□□ -2.29
CNTN1Q12860 Y_RNA.288-201ENST00000364854 92 ntBASIC0.77□□□□□ -2.29
CNTN1Q12860 RNU6-381P-201ENST00000391259 108 ntBASIC0.77□□□□□ -2.29
CNTN1Q12860 MTND2P23-201ENST00000422990 651 ntBASIC0.77□□□□□ -2.29
CNTN1Q12860 SNRPGP8-201ENST00000454064 226 ntBASIC0.77□□□□□ -2.29
CNTN1Q12860 SNORD127-201ENST00000458892 86 ntBASIC0.77□□□□□ -2.29
CNTN1Q12860 snoU13.16-201ENST00000459350 104 ntBASIC0.77□□□□□ -2.29
CNTN1Q12860 RNA5SP153-201ENST00000516498 76 ntBASIC0.77□□□□□ -2.29
CNTN1Q12860 RNU6-197P-201ENST00000516680 100 ntBASIC0.77□□□□□ -2.29
CNTN1Q12860 AC134878.1-201ENST00000619901 243 ntBASIC0.77□□□□□ -2.29
CNTN1Q12860 Y_RNA.76-201ENST00000362931 109 ntBASIC0.76□□□□□ -2.29
CNTN1Q12860 Y_RNA.168-201ENST00000363740 102 ntBASIC0.76□□□□□ -2.29
CNTN1Q12860 SNORD45.3-201ENST00000363836 72 ntBASIC0.76□□□□□ -2.29
CNTN1Q12860 RNU6-1335P-201ENST00000365426 107 ntBASIC0.76□□□□□ -2.29
CNTN1Q12860 RNU4-17P-201ENST00000365598 141 ntBASIC0.76□□□□□ -2.29
CNTN1Q12860 SNORA27-201ENST00000384323 126 ntBASIC0.76□□□□□ -2.29
CNTN1Q12860 MIR146A-201ENST00000385201 99 ntBASIC0.76□□□□□ -2.29
CNTN1Q12860 RNU6-1228P-201ENST00000391014 107 ntBASIC0.76□□□□□ -2.29
CNTN1Q12860 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.76□□□□□ -2.29
CNTN1Q12860 RNU6-994P-201ENST00000410507 111 ntBASIC0.76□□□□□ -2.29
CNTN1Q12860 AL035398.1-201ENST00000430869 322 ntBASIC0.76□□□□□ -2.29
CNTN1Q12860 MTCYBP9-201ENST00000431021 303 ntBASIC0.76□□□□□ -2.29
CNTN1Q12860 AF228730.3-201ENST00000436691 102 ntBASIC0.76□□□□□ -2.29
CNTN1Q12860 SCARNA15.1-201ENST00000516384 125 ntBASIC0.76□□□□□ -2.29
CNTN1Q12860 RNU6-958P-201ENST00000516995 106 ntBASIC0.76□□□□□ -2.29
CNTN1Q12860 MIR4714-201ENST00000580728 77 ntBASIC0.76□□□□□ -2.29
CNTN1Q12860 AC097639.2-201ENST00000603159 172 ntBASIC0.76□□□□□ -2.29
CNTN1Q12860 AC011921.3-201ENST00000605540 361 ntBASIC0.76□□□□□ -2.29
CNTN1Q12860 AL442067.1-201ENST00000613261 223 ntBASIC0.76□□□□□ -2.29
CNTN1Q12860 MIR6866-201ENST00000638146 69 ntBASIC0.76□□□□□ -2.29
CNTN1Q12860 MIR377-201ENST00000362145 69 ntBASIC0.75□□□□□ -2.29
CNTN1Q12860 Y_RNA.133-201ENST00000363428 110 ntBASIC0.75□□□□□ -2.29
CNTN1Q12860 Y_RNA.199-201ENST00000364014 102 ntBASIC0.75□□□□□ -2.29
CNTN1Q12860 Y_RNA.262-201ENST00000364641 102 ntBASIC0.75□□□□□ -2.29
CNTN1Q12860 RNU6-125P-201ENST00000384505 107 ntBASIC0.75□□□□□ -2.29
CNTN1Q12860 MT-TN-201ENST00000387400 73 ntBASIC0.75□□□□□ -2.29
CNTN1Q12860 SNORD89-201ENST00000390981 114 ntBASIC0.75□□□□□ -2.29
CNTN1Q12860 MIR548H3-201ENST00000408771 118 ntBASIC0.75□□□□□ -2.29
CNTN1Q12860 AC090844.1-201ENST00000422019 156 ntBASIC0.75□□□□□ -2.29
CNTN1Q12860 AC067940.1-201ENST00000458411 300 ntBASIC0.75□□□□□ -2.29
CNTN1Q12860 U7.7-201ENST00000459276 60 ntBASIC0.75□□□□□ -2.29
CNTN1Q12860 MIR6835-201ENST00000621552 64 ntBASIC0.75□□□□□ -2.29
CNTN1Q12860 Y_RNA.292-201ENST00000364904 97 ntBASIC0.74□□□□□ -2.29
CNTN1Q12860 Y_RNA.562-201ENST00000384695 113 ntBASIC0.74□□□□□ -2.29
CNTN1Q12860 MIR608-201ENST00000384820 100 ntBASIC0.74□□□□□ -2.29
CNTN1Q12860 MIR568-201ENST00000385036 95 ntBASIC0.74□□□□□ -2.29
CNTN1Q12860 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.74□□□□□ -2.29
CNTN1Q12860 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.74□□□□□ -2.29
CNTN1Q12860 RNU7-73P-201ENST00000458743 63 ntBASIC0.74□□□□□ -2.29
CNTN1Q12860 RPS29P24-201ENST00000486345 171 ntBASIC0.74□□□□□ -2.29
CNTN1Q12860 RNU6-1110P-201ENST00000516462 101 ntBASIC0.74□□□□□ -2.29
CNTN1Q12860 MIR4653-201ENST00000585107 83 ntBASIC0.74□□□□□ -2.29
CNTN1Q12860 AP000753.3-201ENST00000604083 169 ntBASIC0.74□□□□□ -2.29
CNTN1Q12860 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.73□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 198.3 ms