Protein–RNA interactions for Protein: Q12824

SMARCB1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1Q12824 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.42□□□□□ -2.34
SMARCB1Q12824 snoU13.16-201ENST00000459350 104 ntBASIC0.42□□□□□ -2.34
SMARCB1Q12824 SCARNA8-201ENST00000515924 131 ntBASIC0.42□□□□□ -2.34
SMARCB1Q12824 RNY3P15-201ENST00000516297 97 ntBASIC0.42□□□□□ -2.34
SMARCB1Q12824 RNU6-1007P-201ENST00000516586 107 ntBASIC0.42□□□□□ -2.34
SMARCB1Q12824 SNORA27.4-201ENST00000516650 95 ntBASIC0.42□□□□□ -2.34
SMARCB1Q12824 SNORA40.15-201ENST00000516884 107 ntBASIC0.42□□□□□ -2.34
SMARCB1Q12824 RNU6-958P-201ENST00000516995 106 ntBASIC0.42□□□□□ -2.34
SMARCB1Q12824 Y_RNA.721-201ENST00000517207 102 ntBASIC0.42□□□□□ -2.34
SMARCB1Q12824 RNU6-988P-201ENST00000519081 107 ntBASIC0.42□□□□□ -2.34
SMARCB1Q12824 MIR4264-201ENST00000583520 66 ntBASIC0.42□□□□□ -2.34
SMARCB1Q12824 AL136317.1-201ENST00000612653 226 ntBASIC0.42□□□□□ -2.34
SMARCB1Q12824 MIR6740-201ENST00000618268 113 ntBASIC0.42□□□□□ -2.34
SMARCB1Q12824 AC134878.1-201ENST00000619901 243 ntBASIC0.42□□□□□ -2.34
SMARCB1Q12824 Y_RNA.37-201ENST00000362606 108 ntBASIC0.41□□□□□ -2.34
SMARCB1Q12824 Y_RNA.158-201ENST00000363651 101 ntBASIC0.41□□□□□ -2.34
SMARCB1Q12824 Y_RNA.276-201ENST00000364732 109 ntBASIC0.41□□□□□ -2.34
SMARCB1Q12824 RNU5E-4P-201ENST00000364931 120 ntBASIC0.41□□□□□ -2.34
SMARCB1Q12824 RNU6-867P-201ENST00000364956 107 ntBASIC0.41□□□□□ -2.34
SMARCB1Q12824 RNU6-934P-201ENST00000365154 107 ntBASIC0.41□□□□□ -2.34
SMARCB1Q12824 Y_RNA.460-201ENST00000384255 102 ntBASIC0.41□□□□□ -2.34
SMARCB1Q12824 MIR520F-201ENST00000384824 87 ntBASIC0.41□□□□□ -2.34
SMARCB1Q12824 MIR520H-201ENST00000385126 88 ntBASIC0.41□□□□□ -2.34
SMARCB1Q12824 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.41□□□□□ -2.34
SMARCB1Q12824 RNU6-1270P-201ENST00000517128 108 ntBASIC0.41□□□□□ -2.34
SMARCB1Q12824 AP003733.2-201ENST00000529409 171 ntBASIC0.41□□□□□ -2.34
SMARCB1Q12824 AP001094.1-201ENST00000579805 193 ntBASIC0.41□□□□□ -2.34
SMARCB1Q12824 MIR3171-201ENST00000584270 74 ntBASIC0.41□□□□□ -2.34
SMARCB1Q12824 MIR8055-201ENST00000610739 97 ntBASIC0.41□□□□□ -2.34
SMARCB1Q12824 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.41□□□□□ -2.34
SMARCB1Q12824 UBE2WP1-201ENST00000362030 340 ntBASIC0.4□□□□□ -2.35
SMARCB1Q12824 Y_RNA.14-201ENST00000362415 103 ntBASIC0.4□□□□□ -2.35
SMARCB1Q12824 Y_RNA.66-201ENST00000362862 102 ntBASIC0.4□□□□□ -2.35
SMARCB1Q12824 Y_RNA.117-201ENST00000363294 101 ntBASIC0.4□□□□□ -2.35
SMARCB1Q12824 Y_RNA.229-201ENST00000364347 113 ntBASIC0.4□□□□□ -2.35
SMARCB1Q12824 Y_RNA.242-201ENST00000364473 110 ntBASIC0.4□□□□□ -2.35
SMARCB1Q12824 Y_RNA.376-201ENST00000365638 108 ntBASIC0.4□□□□□ -2.35
SMARCB1Q12824 SNORA36.2-201ENST00000384004 127 ntBASIC0.4□□□□□ -2.35
SMARCB1Q12824 MIR526A2-201ENST00000390198 65 ntBASIC0.4□□□□□ -2.35
SMARCB1Q12824 RNU7-62P-201ENST00000458856 62 ntBASIC0.4□□□□□ -2.35
SMARCB1Q12824 RNU7-67P-201ENST00000459003 62 ntBASIC0.4□□□□□ -2.35
SMARCB1Q12824 RNU6-693P-201ENST00000516134 107 ntBASIC0.4□□□□□ -2.35
SMARCB1Q12824 MIR4804-201ENST00000581683 73 ntBASIC0.4□□□□□ -2.35
SMARCB1Q12824 MIR4676-201ENST00000583078 72 ntBASIC0.4□□□□□ -2.35
SMARCB1Q12824 AP000753.3-201ENST00000604083 169 ntBASIC0.4□□□□□ -2.35
SMARCB1Q12824 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
SMARCB1Q12824 Y_RNA.24-201ENST00000362508 103 ntBASIC0.39□□□□□ -2.35
SMARCB1Q12824 Y_RNA.91-201ENST00000363042 107 ntBASIC0.39□□□□□ -2.35
SMARCB1Q12824 RNU6-211P-201ENST00000384047 107 ntBASIC0.39□□□□□ -2.35
SMARCB1Q12824 RNU6-1237P-201ENST00000384777 107 ntBASIC0.39□□□□□ -2.35
SMARCB1Q12824 MIR193B-201ENST00000384907 83 ntBASIC0.39□□□□□ -2.35
SMARCB1Q12824 SNORA53-201ENST00000391141 249 ntBASIC0.39□□□□□ -2.35
SMARCB1Q12824 RNU6-651P-201ENST00000411040 105 ntBASIC0.39□□□□□ -2.35
SMARCB1Q12824 AC023449.1-201ENST00000454464 154 ntBASIC0.39□□□□□ -2.35
SMARCB1Q12824 RNU7-73P-201ENST00000458743 63 ntBASIC0.39□□□□□ -2.35
SMARCB1Q12824 SERF1AP1-201ENST00000514575 187 ntBASIC0.39□□□□□ -2.35
SMARCB1Q12824 SNORA68.3-201ENST00000515906 83 ntBASIC0.39□□□□□ -2.35
SMARCB1Q12824 RNU6-1338P-201ENST00000516328 91 ntBASIC0.39□□□□□ -2.35
SMARCB1Q12824 AC100767.1-201ENST00000528178 123 ntBASIC0.39□□□□□ -2.35
SMARCB1Q12824 Z97988.1-201ENST00000637697 135 ntBASIC0.39□□□□□ -2.35
SMARCB1Q12824 AC010332.2-201ENST00000613083 1904 ntBASIC0.38□□□□□ -2.35
SMARCB1Q12824 RNU6-888P-201ENST00000363010 101 ntBASIC0.38□□□□□ -2.35
SMARCB1Q12824 RNU6-484P-201ENST00000384016 107 ntBASIC0.38□□□□□ -2.35
SMARCB1Q12824 RNU6-514P-201ENST00000384208 107 ntBASIC0.38□□□□□ -2.35
SMARCB1Q12824 MIR140-201ENST00000385282 100 ntBASIC0.38□□□□□ -2.35
SMARCB1Q12824 SNORA40.5-201ENST00000391061 128 ntBASIC0.38□□□□□ -2.35
SMARCB1Q12824 AF228730.3-201ENST00000436691 102 ntBASIC0.38□□□□□ -2.35
SMARCB1Q12824 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.38□□□□□ -2.35
SMARCB1Q12824 AC087499.4-201ENST00000448505 178 ntBASIC0.38□□□□□ -2.35
SMARCB1Q12824 AL138752.1-201ENST00000452964 351 ntBASIC0.38□□□□□ -2.35
SMARCB1Q12824 RNU6-977P-201ENST00000516411 103 ntBASIC0.38□□□□□ -2.35
SMARCB1Q12824 SCARNA24.2-201ENST00000516968 130 ntBASIC0.38□□□□□ -2.35
SMARCB1Q12824 MIR3612-201ENST00000579753 87 ntBASIC0.38□□□□□ -2.35
SMARCB1Q12824 AC008608.1-201ENST00000603910 127 ntBASIC0.38□□□□□ -2.35
SMARCB1Q12824 Y_RNA.802-201ENST00000614892 130 ntBASIC0.38□□□□□ -2.35
SMARCB1Q12824 MIR376A2-201ENST00000636782 80 ntBASIC0.38□□□□□ -2.35
SMARCB1Q12824 MIR18A-201ENST00000362310 71 ntBASIC0.37□□□□□ -2.35
SMARCB1Q12824 Y_RNA.152-201ENST00000363578 100 ntBASIC0.37□□□□□ -2.35
SMARCB1Q12824 snoU2_19.4-201ENST00000364329 80 ntBASIC0.37□□□□□ -2.35
SMARCB1Q12824 SNORD24-201ENST00000383884 75 ntBASIC0.37□□□□□ -2.35
SMARCB1Q12824 SNORA27-201ENST00000384323 126 ntBASIC0.37□□□□□ -2.35
SMARCB1Q12824 RNU6-1289P-201ENST00000384431 106 ntBASIC0.37□□□□□ -2.35
SMARCB1Q12824 MT-TT-201ENST00000387460 66 ntBASIC0.37□□□□□ -2.35
SMARCB1Q12824 RNU6-1203P-201ENST00000410703 110 ntBASIC0.37□□□□□ -2.35
SMARCB1Q12824 RNU6-602P-201ENST00000411155 105 ntBASIC0.37□□□□□ -2.35
SMARCB1Q12824 MTND4LP30-201ENST00000454092 297 ntBASIC0.37□□□□□ -2.35
SMARCB1Q12824 RNU7-56P-201ENST00000458744 62 ntBASIC0.37□□□□□ -2.35
SMARCB1Q12824 RPS29P24-201ENST00000486345 171 ntBASIC0.37□□□□□ -2.35
SMARCB1Q12824 Y_RNA.275-201ENST00000364726 110 ntBASIC0.36□□□□□ -2.35
SMARCB1Q12824 Y_RNA.512-201ENST00000384518 102 ntBASIC0.36□□□□□ -2.35
SMARCB1Q12824 MIR626-201ENST00000385032 94 ntBASIC0.36□□□□□ -2.35
SMARCB1Q12824 MTCYBP6-201ENST00000441810 138 ntBASIC0.36□□□□□ -2.35
SMARCB1Q12824 AL731563.1-201ENST00000442202 214 ntBASIC0.36□□□□□ -2.35
SMARCB1Q12824 AC107297.1-201ENST00000459991 176 ntBASIC0.36□□□□□ -2.35
SMARCB1Q12824 RNU6-570P-201ENST00000517051 105 ntBASIC0.36□□□□□ -2.35
SMARCB1Q12824 MIR1273G-201ENST00000577677 100 ntBASIC0.36□□□□□ -2.35
SMARCB1Q12824 MIR4662B-201ENST00000579498 81 ntBASIC0.36□□□□□ -2.35
SMARCB1Q12824 AP001282.2-201ENST00000616149 309 ntBASIC0.36□□□□□ -2.35
SMARCB1Q12824 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.36□□□□□ -2.35
SMARCB1Q12824 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.35□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 212.1 ms