Protein–RNA interactions for Protein: P78367

NKX3-2, Homeobox protein Nkx-3.2, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-2P78367 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.2□□□□□ -2.06
NKX3-2P78367 MIR4305-201ENST00000583252 102 ntBASIC2.2□□□□□ -2.06
NKX3-2P78367 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.19□□□□□ -2.06
NKX3-2P78367 Y_RNA.454-201ENST00000384224 113 ntBASIC2.19□□□□□ -2.06
NKX3-2P78367 MIR1267-201ENST00000408723 78 ntBASIC2.19□□□□□ -2.06
NKX3-2P78367 HMGN2P38-201ENST00000423806 265 ntBASIC2.19□□□□□ -2.06
NKX3-2P78367 RNU6-998P-201ENST00000515894 101 ntBASIC2.19□□□□□ -2.06
NKX3-2P78367 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.19□□□□□ -2.06
NKX3-2P78367 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.19□□□□□ -2.06
NKX3-2P78367 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.19□□□□□ -2.06
NKX3-2P78367 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
NKX3-2P78367 SNORD115-34-201ENST00000362441 82 ntBASIC2.18□□□□□ -2.06
NKX3-2P78367 SNORD115-12-201ENST00000362583 82 ntBASIC2.18□□□□□ -2.06
NKX3-2P78367 SNORD115-29-201ENST00000362834 82 ntBASIC2.18□□□□□ -2.06
NKX3-2P78367 SNORD115-9-201ENST00000362912 82 ntBASIC2.18□□□□□ -2.06
NKX3-2P78367 SNORD115-21-201ENST00000362963 81 ntBASIC2.18□□□□□ -2.06
NKX3-2P78367 SNORD115-14-201ENST00000363090 81 ntBASIC2.18□□□□□ -2.06
NKX3-2P78367 SNORD115-13-201ENST00000363358 82 ntBASIC2.18□□□□□ -2.06
NKX3-2P78367 SNORD115-41-201ENST00000363608 82 ntBASIC2.18□□□□□ -2.06
NKX3-2P78367 SNORD115-11-201ENST00000363616 82 ntBASIC2.18□□□□□ -2.06
NKX3-2P78367 SNORD115-5-201ENST00000363633 82 ntBASIC2.18□□□□□ -2.06
NKX3-2P78367 SNORD115-39-201ENST00000363694 82 ntBASIC2.18□□□□□ -2.06
NKX3-2P78367 RNU6-414P-201ENST00000363705 104 ntBASIC2.18□□□□□ -2.06
NKX3-2P78367 SNORD115-4-201ENST00000363810 82 ntBASIC2.18□□□□□ -2.06
NKX3-2P78367 SNORD115-16-201ENST00000363887 82 ntBASIC2.18□□□□□ -2.06
NKX3-2P78367 SNORD115-6-201ENST00000363942 82 ntBASIC2.18□□□□□ -2.06
NKX3-2P78367 SNORD115-42-201ENST00000364273 82 ntBASIC2.18□□□□□ -2.06
NKX3-2P78367 SNORD115-15-201ENST00000364809 81 ntBASIC2.18□□□□□ -2.06
NKX3-2P78367 SNORD115-1-201ENST00000364961 82 ntBASIC2.18□□□□□ -2.06
NKX3-2P78367 SNORD115-26-201ENST00000365067 82 ntBASIC2.18□□□□□ -2.06
NKX3-2P78367 SNORD115-10-201ENST00000365073 81 ntBASIC2.18□□□□□ -2.06
NKX3-2P78367 SNORD115-43-201ENST00000365503 82 ntBASIC2.18□□□□□ -2.06
NKX3-2P78367 Y_RNA.362-201ENST00000365518 110 ntBASIC2.18□□□□□ -2.06
NKX3-2P78367 SNORD115-36-201ENST00000365629 82 ntBASIC2.18□□□□□ -2.06
NKX3-2P78367 Y_RNA.495-201ENST00000384435 112 ntBASIC2.18□□□□□ -2.06
NKX3-2P78367 SNORA40.18-201ENST00000391200 128 ntBASIC2.18□□□□□ -2.06
NKX3-2P78367 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.18□□□□□ -2.06
NKX3-2P78367 RPS29P24-201ENST00000486345 171 ntBASIC2.18□□□□□ -2.06
NKX3-2P78367 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.18□□□□□ -2.06
NKX3-2P78367 MIR4709-201ENST00000577272 72 ntBASIC2.18□□□□□ -2.06
NKX3-2P78367 MIR4778-201ENST00000577635 80 ntBASIC2.18□□□□□ -2.06
NKX3-2P78367 SNORD115-40-201ENST00000606510 82 ntBASIC2.18□□□□□ -2.06
NKX3-2P78367 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
NKX3-2P78367 Y_RNA.4-201ENST00000362333 112 ntBASIC2.17□□□□□ -2.06
NKX3-2P78367 Y_RNA.213-201ENST00000364178 111 ntBASIC2.17□□□□□ -2.06
NKX3-2P78367 MIR17-201ENST00000385012 84 ntBASIC2.17□□□□□ -2.06
NKX3-2P78367 SNORA17.3-201ENST00000391159 129 ntBASIC2.17□□□□□ -2.06
NKX3-2P78367 RNA5SP450-201ENST00000411206 102 ntBASIC2.17□□□□□ -2.06
NKX3-2P78367 snoU13.27-201ENST00000459278 104 ntBASIC2.17□□□□□ -2.06
NKX3-2P78367 RNU7-45P-201ENST00000459460 63 ntBASIC2.17□□□□□ -2.06
NKX3-2P78367 RNU7-193P-201ENST00000516723 65 ntBASIC2.17□□□□□ -2.06
NKX3-2P78367 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.17□□□□□ -2.06
NKX3-2P78367 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
NKX3-2P78367 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.16□□□□□ -2.06
NKX3-2P78367 Y_RNA.43-201ENST00000362670 111 ntBASIC2.16□□□□□ -2.06
NKX3-2P78367 RNY4P6-201ENST00000363667 96 ntBASIC2.16□□□□□ -2.06
NKX3-2P78367 MIR526A1-201ENST00000384897 85 ntBASIC2.16□□□□□ -2.06
NKX3-2P78367 MIR452-201ENST00000385020 85 ntBASIC2.16□□□□□ -2.06
NKX3-2P78367 RNA5SP100-201ENST00000410903 110 ntBASIC2.16□□□□□ -2.06
NKX3-2P78367 RNA5SP59-201ENST00000410922 110 ntBASIC2.16□□□□□ -2.06
NKX3-2P78367 AC108667.1-201ENST00000428618 249 ntBASIC2.16□□□□□ -2.06
NKX3-2P78367 RNU2-11P-201ENST00000459191 187 ntBASIC2.16□□□□□ -2.06
NKX3-2P78367 RNU7-96P-201ENST00000459535 64 ntBASIC2.16□□□□□ -2.06
NKX3-2P78367 AC090255.1-201ENST00000495779 349 ntBASIC2.16□□□□□ -2.06
NKX3-2P78367 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.16□□□□□ -2.06
NKX3-2P78367 SNORA31.25-201ENST00000517242 134 ntBASIC2.16□□□□□ -2.06
NKX3-2P78367 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.16□□□□□ -2.06
NKX3-2P78367 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC2.16□□□□□ -2.06
NKX3-2P78367 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.16□□□□□ -2.06
NKX3-2P78367 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.16□□□□□ -2.06
NKX3-2P78367 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
NKX3-2P78367 AL359851.1-201ENST00000569460 4997 ntBASIC2.15□□□□□ -2.06
NKX3-2P78367 RNU6-1255P-201ENST00000363434 112 ntBASIC2.15□□□□□ -2.07
NKX3-2P78367 Y_RNA.163-201ENST00000363702 113 ntBASIC2.15□□□□□ -2.07
NKX3-2P78367 Y_RNA.338-201ENST00000365320 114 ntBASIC2.15□□□□□ -2.07
NKX3-2P78367 Y_RNA.344-201ENST00000365381 112 ntBASIC2.15□□□□□ -2.07
NKX3-2P78367 RNU6-1014P-201ENST00000383940 103 ntBASIC2.15□□□□□ -2.07
NKX3-2P78367 RNU6-32P-201ENST00000383948 107 ntBASIC2.15□□□□□ -2.07
NKX3-2P78367 RNU6-13P-201ENST00000384248 107 ntBASIC2.15□□□□□ -2.07
NKX3-2P78367 RNU6-12P-201ENST00000384604 107 ntBASIC2.15□□□□□ -2.07
NKX3-2P78367 RNU6-41P-201ENST00000384741 107 ntBASIC2.15□□□□□ -2.07
NKX3-2P78367 MIR660-201ENST00000385235 97 ntBASIC2.15□□□□□ -2.07
NKX3-2P78367 PGBD4P5-201ENST00000445958 426 ntBASIC2.15□□□□□ -2.07
NKX3-2P78367 RPL39P34-201ENST00000477141 156 ntBASIC2.15□□□□□ -2.07
NKX3-2P78367 MIR4287-201ENST00000579398 78 ntBASIC2.15□□□□□ -2.07
NKX3-2P78367 AL513423.1-201ENST00000621695 132 ntBASIC2.15□□□□□ -2.07
NKX3-2P78367 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
NKX3-2P78367 AL589743.1-201ENST00000551932 2712 ntBASIC2.14□□□□□ -2.07
NKX3-2P78367 MIR302B-201ENST00000362188 73 ntBASIC2.14□□□□□ -2.07
NKX3-2P78367 Y_RNA.309-201ENST00000365046 111 ntBASIC2.14□□□□□ -2.07
NKX3-2P78367 Y_RNA.370-201ENST00000365589 108 ntBASIC2.14□□□□□ -2.07
NKX3-2P78367 MIR136-201ENST00000385207 82 ntBASIC2.14□□□□□ -2.07
NKX3-2P78367 MIR759-201ENST00000390224 91 ntBASIC2.14□□□□□ -2.07
NKX3-2P78367 SNORD28B-201ENST00000390993 75 ntBASIC2.14□□□□□ -2.07
NKX3-2P78367 RNA5SP144-201ENST00000410846 116 ntBASIC2.14□□□□□ -2.07
NKX3-2P78367 AL035398.1-201ENST00000430869 322 ntBASIC2.14□□□□□ -2.07
NKX3-2P78367 RNA5SP481-201ENST00000516814 122 ntBASIC2.14□□□□□ -2.07
NKX3-2P78367 AC021613.1-201ENST00000623880 111 ntBASIC2.14□□□□□ -2.07
NKX3-2P78367 SNORD3E-202ENST00000627253 216 ntBASIC2.14□□□□□ -2.07
NKX3-2P78367 AP000553.5-201ENST00000641933 54 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms