Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.07□□□□□ -2.24
RHBDL3P58872 CYP3A137P-201ENST00000562436 69 ntBASIC1.07□□□□□ -2.24
RHBDL3P58872 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC1.07□□□□□ -2.24
RHBDL3P58872 MIR4653-201ENST00000585107 83 ntBASIC1.07□□□□□ -2.24
RHBDL3P58872 RNU6-654P-201ENST00000364373 107 ntBASIC1.06□□□□□ -2.24
RHBDL3P58872 SNORA63C-201ENST00000364578 129 ntBASIC1.06□□□□□ -2.24
RHBDL3P58872 Y_RNA.410-201ENST00000383992 113 ntBASIC1.06□□□□□ -2.24
RHBDL3P58872 MIR518F-201ENST00000384973 87 ntBASIC1.06□□□□□ -2.24
RHBDL3P58872 MIR548F4-201ENST00000408515 105 ntBASIC1.06□□□□□ -2.24
RHBDL3P58872 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.06□□□□□ -2.24
RHBDL3P58872 RNU7-73P-201ENST00000458743 63 ntBASIC1.06□□□□□ -2.24
RHBDL3P58872 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.06□□□□□ -2.24
RHBDL3P58872 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.06□□□□□ -2.24
RHBDL3P58872 AL117187.1-201ENST00000555482 181 ntBASIC1.06□□□□□ -2.24
RHBDL3P58872 MIR5000-201ENST00000577717 103 ntBASIC1.06□□□□□ -2.24
RHBDL3P58872 MIR4282-201ENST00000583613 67 ntBASIC1.06□□□□□ -2.24
RHBDL3P58872 AC012433.1-201ENST00000588916 398 ntBASIC1.06□□□□□ -2.24
RHBDL3P58872 AC008737.2-201ENST00000599446 118 ntBASIC1.06□□□□□ -2.24
RHBDL3P58872 RNU6-94P-201ENST00000607728 107 ntBASIC1.06□□□□□ -2.24
RHBDL3P58872 PVT1_3.1-201ENST00000620853 95 ntBASIC1.06□□□□□ -2.24
RHBDL3P58872 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.06□□□□□ -2.24
RHBDL3P58872 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.05□□□□□ -2.24
RHBDL3P58872 SNORA27-201ENST00000384323 126 ntBASIC1.05□□□□□ -2.24
RHBDL3P58872 SNORD89-201ENST00000390981 114 ntBASIC1.05□□□□□ -2.24
RHBDL3P58872 AC113410.1-201ENST00000505029 247 ntBASIC1.05□□□□□ -2.24
RHBDL3P58872 AC007751.1-201ENST00000529260 376 ntBASIC1.05□□□□□ -2.24
RHBDL3P58872 FAM71BP1-201ENST00000604431 523 ntBASIC1.05□□□□□ -2.24
RHBDL3P58872 AL353765.1-201ENST00000605514 183 ntBASIC1.05□□□□□ -2.24
RHBDL3P58872 MIR1-1-201ENST00000362147 71 ntBASIC1.04□□□□□ -2.24
RHBDL3P58872 SNORD61-201ENST00000384252 73 ntBASIC1.04□□□□□ -2.24
RHBDL3P58872 Y_RNA.483-201ENST00000384380 101 ntBASIC1.04□□□□□ -2.24
RHBDL3P58872 Y_RNA.512-201ENST00000384518 102 ntBASIC1.04□□□□□ -2.24
RHBDL3P58872 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
RHBDL3P58872 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.04□□□□□ -2.24
RHBDL3P58872 SNORA79-201ENST00000408376 140 ntBASIC1.04□□□□□ -2.24
RHBDL3P58872 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.04□□□□□ -2.24
RHBDL3P58872 RPS29P24-201ENST00000486345 171 ntBASIC1.04□□□□□ -2.24
RHBDL3P58872 PSMC1P5-201ENST00000512850 177 ntBASIC1.04□□□□□ -2.24
RHBDL3P58872 RNU6-1270P-201ENST00000517128 108 ntBASIC1.04□□□□□ -2.24
RHBDL3P58872 AC103810.9-201ENST00000606688 112 ntBASIC1.04□□□□□ -2.24
RHBDL3P58872 Y_RNA.262-201ENST00000364641 102 ntBASIC1.03□□□□□ -2.24
RHBDL3P58872 MIR1827-201ENST00000408549 66 ntBASIC1.03□□□□□ -2.24
RHBDL3P58872 MIR548H3-201ENST00000408771 118 ntBASIC1.03□□□□□ -2.24
RHBDL3P58872 RNU7-96P-201ENST00000459535 64 ntBASIC1.03□□□□□ -2.24
RHBDL3P58872 RNA5SP436-201ENST00000516020 115 ntBASIC1.03□□□□□ -2.24
RHBDL3P58872 SNORA18.4-201ENST00000516440 124 ntBASIC1.03□□□□□ -2.24
RHBDL3P58872 RNU6-958P-201ENST00000516995 106 ntBASIC1.03□□□□□ -2.24
RHBDL3P58872 7SK.10-201ENST00000621414 298 ntBASIC1.03□□□□□ -2.24
RHBDL3P58872 HSBP1P2-201ENST00000299671 229 ntBASIC1.02□□□□□ -2.25
RHBDL3P58872 Y_RNA.199-201ENST00000364014 102 ntBASIC1.02□□□□□ -2.25
RHBDL3P58872 Y_RNA.634-201ENST00000364811 113 ntBASIC1.02□□□□□ -2.25
RHBDL3P58872 RNU6-580P-201ENST00000365159 107 ntBASIC1.02□□□□□ -2.25
RHBDL3P58872 RNU4-17P-201ENST00000365598 141 ntBASIC1.02□□□□□ -2.25
RHBDL3P58872 RNU6-110P-201ENST00000384508 104 ntBASIC1.02□□□□□ -2.25
RHBDL3P58872 RNU6-738P-201ENST00000384531 106 ntBASIC1.02□□□□□ -2.25
RHBDL3P58872 Y_RNA.556-201ENST00000384677 113 ntBASIC1.02□□□□□ -2.25
RHBDL3P58872 MIR598-201ENST00000384868 97 ntBASIC1.02□□□□□ -2.25
RHBDL3P58872 MIR613-201ENST00000385248 95 ntBASIC1.02□□□□□ -2.25
RHBDL3P58872 MT-TW-201ENST00000387382 68 ntBASIC1.02□□□□□ -2.25
RHBDL3P58872 AC097639.2-201ENST00000603159 172 ntBASIC1.02□□□□□ -2.25
RHBDL3P58872 AC104465.1-201ENST00000611365 139 ntBASIC1.02□□□□□ -2.25
RHBDL3P58872 RNU6-103P-201ENST00000363686 107 ntBASIC1.01□□□□□ -2.25
RHBDL3P58872 RNU6-694P-201ENST00000364071 147 ntBASIC1.01□□□□□ -2.25
RHBDL3P58872 RNU6-484P-201ENST00000384016 107 ntBASIC1.01□□□□□ -2.25
RHBDL3P58872 Y_RNA.459-201ENST00000384251 102 ntBASIC1.01□□□□□ -2.25
RHBDL3P58872 Y_RNA.572-201ENST00000384757 98 ntBASIC1.01□□□□□ -2.25
RHBDL3P58872 AL606845.1-201ENST00000404881 255 ntBASIC1.01□□□□□ -2.25
RHBDL3P58872 AL035398.1-201ENST00000430869 322 ntBASIC1.01□□□□□ -2.25
RHBDL3P58872 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.01□□□□□ -2.25
RHBDL3P58872 AL365265.1-201ENST00000621045 234 ntBASIC1.01□□□□□ -2.25
RHBDL3P58872 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1□□□□□ -2.25
RHBDL3P58872 Y_RNA.66-201ENST00000362862 102 ntBASIC1□□□□□ -2.25
RHBDL3P58872 Y_RNA.288-201ENST00000364854 92 ntBASIC1□□□□□ -2.25
RHBDL3P58872 RNU6-1189P-201ENST00000383958 107 ntBASIC1□□□□□ -2.25
RHBDL3P58872 RNU6-342P-201ENST00000384521 104 ntBASIC1□□□□□ -2.25
RHBDL3P58872 SNORD38B-201ENST00000384690 67 ntBASIC1□□□□□ -2.25
RHBDL3P58872 MIR548A2-201ENST00000384956 97 ntBASIC1□□□□□ -2.25
RHBDL3P58872 MIR1302-3-201ENST00000408128 138 ntBASIC1□□□□□ -2.25
RHBDL3P58872 RNU6-938P-201ENST00000411285 103 ntBASIC1□□□□□ -2.25
RHBDL3P58872 SNORD38B-202ENST00000625943 69 ntBASIC1□□□□□ -2.25
RHBDL3P58872 RNU6-728P-201ENST00000365375 104 ntBASIC0.99□□□□□ -2.25
RHBDL3P58872 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
RHBDL3P58872 MIR100-201ENST00000385259 80 ntBASIC0.99□□□□□ -2.25
RHBDL3P58872 RNA5SP95-201ENST00000410319 137 ntBASIC0.99□□□□□ -2.25
RHBDL3P58872 Y_RNA.622-201ENST00000411091 108 ntBASIC0.99□□□□□ -2.25
RHBDL3P58872 Y_RNA.47-201ENST00000362697 108 ntBASIC0.98□□□□□ -2.25
RHBDL3P58872 RNU6-472P-201ENST00000384299 107 ntBASIC0.98□□□□□ -2.25
RHBDL3P58872 SNRPGP8-201ENST00000454064 226 ntBASIC0.98□□□□□ -2.25
RHBDL3P58872 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.98□□□□□ -2.25
RHBDL3P58872 AL442067.1-201ENST00000613261 223 ntBASIC0.98□□□□□ -2.25
RHBDL3P58872 SNORA1.1-201ENST00000364671 133 ntBASIC0.97□□□□□ -2.25
RHBDL3P58872 RNU6-125P-201ENST00000384505 107 ntBASIC0.97□□□□□ -2.25
RHBDL3P58872 MIR7-2-201ENST00000384970 110 ntBASIC0.97□□□□□ -2.25
RHBDL3P58872 SNORD105-201ENST00000386910 85 ntBASIC0.97□□□□□ -2.25
RHBDL3P58872 RNU6-381P-201ENST00000391259 108 ntBASIC0.97□□□□□ -2.25
RHBDL3P58872 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.97□□□□□ -2.25
RHBDL3P58872 AC004941.2-201ENST00000427009 228 ntBASIC0.97□□□□□ -2.25
RHBDL3P58872 SNORD36C-201ENST00000516733 66 ntBASIC0.97□□□□□ -2.25
RHBDL3P58872 RNA5SP480-201ENST00000516840 109 ntBASIC0.97□□□□□ -2.25
RHBDL3P58872 AC108706.1-201ENST00000611053 297 ntBASIC0.97□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 269.9 ms