Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 RNU6-1270P-201ENST00000517128 108 ntBASIC0.87□□□□□ -2.27
CDH13P55290 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.87□□□□□ -2.27
CDH13P55290 Y_RNA.54-201ENST00000362766 105 ntBASIC0.86□□□□□ -2.27
CDH13P55290 Y_RNA.91-201ENST00000363042 107 ntBASIC0.86□□□□□ -2.27
CDH13P55290 Y_RNA.164-201ENST00000363709 102 ntBASIC0.86□□□□□ -2.27
CDH13P55290 SNORD45.3-201ENST00000363836 72 ntBASIC0.86□□□□□ -2.27
CDH13P55290 Y_RNA.292-201ENST00000364904 97 ntBASIC0.86□□□□□ -2.27
CDH13P55290 RNU6-580P-201ENST00000365159 107 ntBASIC0.86□□□□□ -2.27
CDH13P55290 SNORD58.1-201ENST00000391313 66 ntBASIC0.86□□□□□ -2.27
CDH13P55290 AC067940.1-201ENST00000458411 300 ntBASIC0.86□□□□□ -2.27
CDH13P55290 RNU6-1132P-201ENST00000459214 107 ntBASIC0.86□□□□□ -2.27
CDH13P55290 RPS29P24-201ENST00000486345 171 ntBASIC0.86□□□□□ -2.27
CDH13P55290 Y_RNA.668-201ENST00000516233 93 ntBASIC0.86□□□□□ -2.27
CDH13P55290 AC025627.3-201ENST00000582078 182 ntBASIC0.86□□□□□ -2.27
CDH13P55290 MIR4264-201ENST00000583520 66 ntBASIC0.86□□□□□ -2.27
CDH13P55290 AP000753.3-201ENST00000604083 169 ntBASIC0.86□□□□□ -2.27
CDH13P55290 AL136317.1-201ENST00000612653 226 ntBASIC0.86□□□□□ -2.27
CDH13P55290 Y_RNA.76-201ENST00000362931 109 ntBASIC0.85□□□□□ -2.27
CDH13P55290 Y_RNA.199-201ENST00000364014 102 ntBASIC0.85□□□□□ -2.27
CDH13P55290 Y_RNA.478-201ENST00000384358 107 ntBASIC0.85□□□□□ -2.27
CDH13P55290 SNORA2B-201ENST00000384583 137 ntBASIC0.85□□□□□ -2.27
CDH13P55290 RNU4-43P-201ENST00000410628 137 ntBASIC0.85□□□□□ -2.27
CDH13P55290 Y_RNA.622-201ENST00000411091 108 ntBASIC0.85□□□□□ -2.27
CDH13P55290 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.85□□□□□ -2.27
CDH13P55290 RNU6-197P-201ENST00000516680 100 ntBASIC0.85□□□□□ -2.27
CDH13P55290 RNA5SP102-201ENST00000516865 106 ntBASIC0.85□□□□□ -2.27
CDH13P55290 RNU6-958P-201ENST00000516995 106 ntBASIC0.85□□□□□ -2.27
CDH13P55290 AC211469.2-201ENST00000605461 205 ntBASIC0.85□□□□□ -2.27
CDH13P55290 RNU6-728P-201ENST00000365375 104 ntBASIC0.84□□□□□ -2.27
CDH13P55290 RNU6-1189P-201ENST00000383958 107 ntBASIC0.84□□□□□ -2.27
CDH13P55290 MIR608-201ENST00000384820 100 ntBASIC0.84□□□□□ -2.27
CDH13P55290 MIR568-201ENST00000385036 95 ntBASIC0.84□□□□□ -2.27
CDH13P55290 SNORA79-201ENST00000408376 140 ntBASIC0.84□□□□□ -2.27
CDH13P55290 RNU6-994P-201ENST00000410507 111 ntBASIC0.84□□□□□ -2.27
CDH13P55290 RNU2-64P-201ENST00000411315 191 ntBASIC0.84□□□□□ -2.27
CDH13P55290 AF228730.3-201ENST00000436691 102 ntBASIC0.84□□□□□ -2.27
CDH13P55290 RNU7-96P-201ENST00000459535 64 ntBASIC0.84□□□□□ -2.27
CDH13P55290 SNORD36C-201ENST00000516733 66 ntBASIC0.84□□□□□ -2.27
CDH13P55290 MIR4698-201ENST00000577795 80 ntBASIC0.84□□□□□ -2.27
CDH13P55290 RNU6-94P-201ENST00000607728 107 ntBASIC0.84□□□□□ -2.27
CDH13P55290 Y_RNA.20-201ENST00000362479 113 ntBASIC0.83□□□□□ -2.28
CDH13P55290 RNY4P28-201ENST00000365281 93 ntBASIC0.83□□□□□ -2.28
CDH13P55290 RNU6-125P-201ENST00000384505 107 ntBASIC0.83□□□□□ -2.28
CDH13P55290 Y_RNA.542-201ENST00000384641 111 ntBASIC0.83□□□□□ -2.28
CDH13P55290 AL035398.1-201ENST00000430869 322 ntBASIC0.83□□□□□ -2.28
CDH13P55290 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.83□□□□□ -2.28
CDH13P55290 FAM71BP1-201ENST00000604431 523 ntBASIC0.83□□□□□ -2.28
CDH13P55290 MIR8055-201ENST00000610739 97 ntBASIC0.83□□□□□ -2.28
CDH13P55290 Z97988.1-201ENST00000637697 135 ntBASIC0.83□□□□□ -2.28
CDH13P55290 SNORD114-27-201ENST00000363766 70 ntBASIC0.82□□□□□ -2.28
CDH13P55290 MIR532-201ENST00000385025 91 ntBASIC0.82□□□□□ -2.28
CDH13P55290 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.82□□□□□ -2.28
CDH13P55290 RNA5SP95-201ENST00000410319 137 ntBASIC0.82□□□□□ -2.28
CDH13P55290 AC113410.1-201ENST00000505029 247 ntBASIC0.82□□□□□ -2.28
CDH13P55290 RNU6-998P-201ENST00000515894 101 ntBASIC0.82□□□□□ -2.28
CDH13P55290 ACA64.5-201ENST00000516207 127 ntBASIC0.82□□□□□ -2.28
CDH13P55290 MIR4744-201ENST00000581563 82 ntBASIC0.82□□□□□ -2.28
CDH13P55290 MIR8070-201ENST00000616510 88 ntBASIC0.82□□□□□ -2.28
CDH13P55290 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.81□□□□□ -2.28
CDH13P55290 SNORD114-2-201ENST00000363953 78 ntBASIC0.81□□□□□ -2.28
CDH13P55290 Y_RNA.350-201ENST00000365409 98 ntBASIC0.81□□□□□ -2.28
CDH13P55290 Y_RNA.440-201ENST00000384120 114 ntBASIC0.81□□□□□ -2.28
CDH13P55290 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.81□□□□□ -2.28
CDH13P55290 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.81□□□□□ -2.28
CDH13P55290 SNORD89-201ENST00000390981 114 ntBASIC0.81□□□□□ -2.28
CDH13P55290 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.81□□□□□ -2.28
CDH13P55290 MIR1827-201ENST00000408549 66 ntBASIC0.81□□□□□ -2.28
CDH13P55290 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.81□□□□□ -2.28
CDH13P55290 MIR3973-201ENST00000579824 107 ntBASIC0.81□□□□□ -2.28
CDH13P55290 AC013244.2-201ENST00000603396 103 ntBASIC0.81□□□□□ -2.28
CDH13P55290 AL353765.1-201ENST00000605514 183 ntBASIC0.81□□□□□ -2.28
CDH13P55290 U4.1-201ENST00000620349 87 ntBASIC0.81□□□□□ -2.28
CDH13P55290 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
CDH13P55290 Y_RNA.23-201ENST00000362496 106 ntBASIC0.8□□□□□ -2.28
CDH13P55290 Y_RNA.121-201ENST00000363309 113 ntBASIC0.8□□□□□ -2.28
CDH13P55290 RNU6-1292P-201ENST00000383856 107 ntBASIC0.8□□□□□ -2.28
CDH13P55290 SNORD38B-201ENST00000384690 67 ntBASIC0.8□□□□□ -2.28
CDH13P55290 RNU6-913P-201ENST00000390913 95 ntBASIC0.8□□□□□ -2.28
CDH13P55290 SNORD77.3-201ENST00000391113 65 ntBASIC0.8□□□□□ -2.28
CDH13P55290 MIR1276-201ENST00000408707 83 ntBASIC0.8□□□□□ -2.28
CDH13P55290 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC0.8□□□□□ -2.28
CDH13P55290 RNU6-351P-201ENST00000516097 100 ntBASIC0.8□□□□□ -2.28
CDH13P55290 Y_RNA.676-201ENST00000516393 96 ntBASIC0.8□□□□□ -2.28
CDH13P55290 RNU6-113P-201ENST00000516653 101 ntBASIC0.8□□□□□ -2.28
CDH13P55290 AC062037.2-201ENST00000610137 73 ntBASIC0.8□□□□□ -2.28
CDH13P55290 SNORD38B-202ENST00000625943 69 ntBASIC0.8□□□□□ -2.28
CDH13P55290 MIR1-1-201ENST00000362147 71 ntBASIC0.79□□□□□ -2.28
CDH13P55290 SNORA25.9-201ENST00000365087 128 ntBASIC0.79□□□□□ -2.28
CDH13P55290 MIR146A-201ENST00000385201 99 ntBASIC0.79□□□□□ -2.28
CDH13P55290 AC090844.1-201ENST00000422019 156 ntBASIC0.79□□□□□ -2.28
CDH13P55290 AC244023.1-201ENST00000426884 112 ntBASIC0.79□□□□□ -2.28
CDH13P55290 MTND3P2-201ENST00000438452 342 ntBASIC0.79□□□□□ -2.28
CDH13P55290 MTND1P19-201ENST00000511780 315 ntBASIC0.79□□□□□ -2.28
CDH13P55290 RNU6-561P-201ENST00000516222 102 ntBASIC0.79□□□□□ -2.28
CDH13P55290 MIR4653-201ENST00000585107 83 ntBASIC0.79□□□□□ -2.28
CDH13P55290 AL365205.2-201ENST00000594586 68 ntBASIC0.79□□□□□ -2.28
CDH13P55290 AC242498.1-201ENST00000604134 111 ntBASIC0.79□□□□□ -2.28
CDH13P55290 MIR6857-201ENST00000613267 93 ntBASIC0.79□□□□□ -2.28
CDH13P55290 Y_RNA.7-201ENST00000362352 102 ntBASIC0.78□□□□□ -2.28
CDH13P55290 SNORD27-201ENST00000363981 72 ntBASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 187 ms