Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 AL359821.1-201ENST00000605519 182 ntBASIC1.65□□□□□ -2.15
COPB1P53618 AC106754.2-201ENST00000623006 233 ntBASIC1.65□□□□□ -2.15
COPB1P53618 AC091895.1-201ENST00000624494 256 ntBASIC1.65□□□□□ -2.15
COPB1P53618 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.65□□□□□ -2.15
COPB1P53618 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.64□□□□□ -2.15
COPB1P53618 MIR302D-201ENST00000362275 68 ntBASIC1.64□□□□□ -2.15
COPB1P53618 RNU6-915P-201ENST00000364943 103 ntBASIC1.64□□□□□ -2.15
COPB1P53618 MIR513A1-201ENST00000385138 129 ntBASIC1.64□□□□□ -2.15
COPB1P53618 SNORA40.5-201ENST00000391061 128 ntBASIC1.64□□□□□ -2.15
COPB1P53618 AL603914.1-201ENST00000401964 204 ntBASIC1.64□□□□□ -2.15
COPB1P53618 RNU6-321P-201ENST00000410912 106 ntBASIC1.64□□□□□ -2.15
COPB1P53618 SNORD123-201ENST00000459473 70 ntBASIC1.64□□□□□ -2.15
COPB1P53618 RPS26P48-201ENST00000491713 339 ntBASIC1.64□□□□□ -2.15
COPB1P53618 RNU2-13P-201ENST00000515909 113 ntBASIC1.64□□□□□ -2.15
COPB1P53618 SNORD53B-201ENST00000577887 78 ntBASIC1.64□□□□□ -2.15
COPB1P53618 AP000648.3-201ENST00000623539 4507 ntBASIC1.64□□□□□ -2.15
COPB1P53618 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.63□□□□□ -2.15
COPB1P53618 RNU6-508P-201ENST00000363231 103 ntBASIC1.63□□□□□ -2.15
COPB1P53618 AC090049.2-201ENST00000550377 109 ntBASIC1.63□□□□□ -2.15
COPB1P53618 MIR3121-201ENST00000579680 77 ntBASIC1.63□□□□□ -2.15
COPB1P53618 MIR548AR-201ENST00000582191 57 ntBASIC1.63□□□□□ -2.15
COPB1P53618 SNORD115-34-201ENST00000362441 82 ntBASIC1.62□□□□□ -2.15
COPB1P53618 SNORD115-12-201ENST00000362583 82 ntBASIC1.62□□□□□ -2.15
COPB1P53618 SNORD115-29-201ENST00000362834 82 ntBASIC1.62□□□□□ -2.15
COPB1P53618 SNORD115-9-201ENST00000362912 82 ntBASIC1.62□□□□□ -2.15
COPB1P53618 SNORD115-21-201ENST00000362963 81 ntBASIC1.62□□□□□ -2.15
COPB1P53618 SNORD115-14-201ENST00000363090 81 ntBASIC1.62□□□□□ -2.15
COPB1P53618 SNORD115-13-201ENST00000363358 82 ntBASIC1.62□□□□□ -2.15
COPB1P53618 SNORD115-41-201ENST00000363608 82 ntBASIC1.62□□□□□ -2.15
COPB1P53618 SNORD115-11-201ENST00000363616 82 ntBASIC1.62□□□□□ -2.15
COPB1P53618 SNORD115-5-201ENST00000363633 82 ntBASIC1.62□□□□□ -2.15
COPB1P53618 SNORD115-39-201ENST00000363694 82 ntBASIC1.62□□□□□ -2.15
COPB1P53618 SNORD115-4-201ENST00000363810 82 ntBASIC1.62□□□□□ -2.15
COPB1P53618 SNORD115-16-201ENST00000363887 82 ntBASIC1.62□□□□□ -2.15
COPB1P53618 SNORD115-6-201ENST00000363942 82 ntBASIC1.62□□□□□ -2.15
COPB1P53618 SNORD115-42-201ENST00000364273 82 ntBASIC1.62□□□□□ -2.15
COPB1P53618 RNU6-309P-201ENST00000364573 106 ntBASIC1.62□□□□□ -2.15
COPB1P53618 Y_RNA.280-201ENST00000364765 112 ntBASIC1.62□□□□□ -2.15
COPB1P53618 SNORD115-15-201ENST00000364809 81 ntBASIC1.62□□□□□ -2.15
COPB1P53618 SNORD115-1-201ENST00000364961 82 ntBASIC1.62□□□□□ -2.15
COPB1P53618 SNORD115-26-201ENST00000365067 82 ntBASIC1.62□□□□□ -2.15
COPB1P53618 SNORD115-10-201ENST00000365073 81 ntBASIC1.62□□□□□ -2.15
COPB1P53618 SNORA25.9-201ENST00000365087 128 ntBASIC1.62□□□□□ -2.15
COPB1P53618 SNORD115-43-201ENST00000365503 82 ntBASIC1.62□□□□□ -2.15
COPB1P53618 SNORD115-36-201ENST00000365629 82 ntBASIC1.62□□□□□ -2.15
COPB1P53618 RNU6-959P-201ENST00000384671 107 ntBASIC1.62□□□□□ -2.15
COPB1P53618 SNORD28B-201ENST00000390993 75 ntBASIC1.62□□□□□ -2.15
COPB1P53618 AP1B1P2-201ENST00000416196 106 ntBASIC1.62□□□□□ -2.15
COPB1P53618 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.62□□□□□ -2.15
COPB1P53618 Y_RNA.651-201ENST00000459380 103 ntBASIC1.62□□□□□ -2.15
COPB1P53618 AC005908.1-201ENST00000468701 347 ntBASIC1.62□□□□□ -2.15
COPB1P53618 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.62□□□□□ -2.15
COPB1P53618 SNORA74.3-201ENST00000517108 154 ntBASIC1.62□□□□□ -2.15
COPB1P53618 DNAJC19P9-201ENST00000555084 351 ntBASIC1.62□□□□□ -2.15
COPB1P53618 SNORD115-40-201ENST00000606510 82 ntBASIC1.62□□□□□ -2.15
COPB1P53618 U7.2-201ENST00000607576 63 ntBASIC1.62□□□□□ -2.15
COPB1P53618 TUG1_4.1-201ENST00000619464 181 ntBASIC1.62□□□□□ -2.15
COPB1P53618 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.62□□□□□ -2.15
COPB1P53618 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.61□□□□□ -2.15
COPB1P53618 RNA5SP259-201ENST00000365541 109 ntBASIC1.61□□□□□ -2.15
COPB1P53618 MIR30A-201ENST00000385092 71 ntBASIC1.61□□□□□ -2.15
COPB1P53618 RNU4-62P-201ENST00000410125 130 ntBASIC1.61□□□□□ -2.15
COPB1P53618 RNA5SP61-201ENST00000516453 100 ntBASIC1.61□□□□□ -2.15
COPB1P53618 SNORA18.7-201ENST00000516910 131 ntBASIC1.61□□□□□ -2.15
COPB1P53618 RNU6-971P-201ENST00000516920 106 ntBASIC1.61□□□□□ -2.15
COPB1P53618 MIR4285-201ENST00000581001 85 ntBASIC1.61□□□□□ -2.15
COPB1P53618 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.6□□□□□ -2.15
COPB1P53618 Y_RNA.241-201ENST00000364470 117 ntBASIC1.6□□□□□ -2.15
COPB1P53618 SNORA1.2-201ENST00000365189 134 ntBASIC1.6□□□□□ -2.15
COPB1P53618 SNORA27-201ENST00000384323 126 ntBASIC1.6□□□□□ -2.15
COPB1P53618 SNORA19-201ENST00000384737 128 ntBASIC1.6□□□□□ -2.15
COPB1P53618 MIR499A-201ENST00000384903 122 ntBASIC1.6□□□□□ -2.15
COPB1P53618 MIR517C-201ENST00000385103 95 ntBASIC1.6□□□□□ -2.15
COPB1P53618 SNORD41-201ENST00000386967 70 ntBASIC1.6□□□□□ -2.15
COPB1P53618 AC009474.2-201ENST00000451383 136 ntBASIC1.6□□□□□ -2.15
COPB1P53618 Y_RNA.690-201ENST00000516603 95 ntBASIC1.6□□□□□ -2.15
COPB1P53618 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.6□□□□□ -2.15
COPB1P53618 U2.22-201ENST00000636441 106 ntBASIC1.6□□□□□ -2.15
COPB1P53618 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
COPB1P53618 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.59□□□□□ -2.15
COPB1P53618 RNU1-42P-201ENST00000364033 160 ntBASIC1.59□□□□□ -2.15
COPB1P53618 Y_RNA.370-201ENST00000365589 108 ntBASIC1.59□□□□□ -2.15
COPB1P53618 SNORD18B-201ENST00000365659 72 ntBASIC1.59□□□□□ -2.15
COPB1P53618 SNORA24-201ENST00000384096 131 ntBASIC1.59□□□□□ -2.15
COPB1P53618 AC008834.1-201ENST00000511612 175 ntBASIC1.59□□□□□ -2.15
COPB1P53618 SNORA31.4-201ENST00000516049 129 ntBASIC1.59□□□□□ -2.15
COPB1P53618 RNU6-970P-201ENST00000516312 107 ntBASIC1.59□□□□□ -2.15
COPB1P53618 Y_RNA.692-201ENST00000516627 105 ntBASIC1.59□□□□□ -2.15
COPB1P53618 AC090821.2-201ENST00000523552 176 ntBASIC1.59□□□□□ -2.15
COPB1P53618 AL513534.2-201ENST00000603836 250 ntBASIC1.59□□□□□ -2.15
COPB1P53618 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
COPB1P53618 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
COPB1P53618 Y_RNA.218-201ENST00000364218 104 ntBASIC1.58□□□□□ -2.16
COPB1P53618 Y_RNA.294-201ENST00000364916 102 ntBASIC1.58□□□□□ -2.16
COPB1P53618 SNORD1A-201ENST00000364968 72 ntBASIC1.58□□□□□ -2.16
COPB1P53618 Y_RNA.351-201ENST00000365436 96 ntBASIC1.58□□□□□ -2.16
COPB1P53618 MIR539-201ENST00000365690 78 ntBASIC1.58□□□□□ -2.16
COPB1P53618 MIR934-201ENST00000401241 83 ntBASIC1.58□□□□□ -2.16
COPB1P53618 AL606753.1-201ENST00000427435 87 ntBASIC1.58□□□□□ -2.16
COPB1P53618 AL354695.1-201ENST00000427935 228 ntBASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 182.6 ms