Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.09□□□□□ -2.23
LBX1P52954 Y_RNA.262-201ENST00000364641 102 ntBASIC1.09□□□□□ -2.23
LBX1P52954 Y_RNA.486-201ENST00000384398 107 ntBASIC1.09□□□□□ -2.23
LBX1P52954 RNU6-939P-201ENST00000384634 107 ntBASIC1.09□□□□□ -2.23
LBX1P52954 MIR518F-201ENST00000384973 87 ntBASIC1.09□□□□□ -2.23
LBX1P52954 MIR618-201ENST00000385287 98 ntBASIC1.09□□□□□ -2.23
LBX1P52954 MIR548O-201ENST00000408583 114 ntBASIC1.09□□□□□ -2.23
LBX1P52954 RNU4-43P-201ENST00000410628 137 ntBASIC1.09□□□□□ -2.23
LBX1P52954 AL591704.2-201ENST00000421658 181 ntBASIC1.09□□□□□ -2.23
LBX1P52954 AC048334.1-201ENST00000477975 159 ntBASIC1.09□□□□□ -2.23
LBX1P52954 RPS26P48-201ENST00000491713 339 ntBASIC1.09□□□□□ -2.23
LBX1P52954 SNORA31.2-201ENST00000516019 134 ntBASIC1.09□□□□□ -2.23
LBX1P52954 RNU4-71P-201ENST00000516258 113 ntBASIC1.09□□□□□ -2.23
LBX1P52954 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
LBX1P52954 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC1.09□□□□□ -2.23
LBX1P52954 AC133485.1-201ENST00000567176 124 ntBASIC1.09□□□□□ -2.23
LBX1P52954 AC138907.6-201ENST00000568401 126 ntBASIC1.09□□□□□ -2.23
LBX1P52954 MIR4764-201ENST00000580680 88 ntBASIC1.09□□□□□ -2.23
LBX1P52954 Pinc.1-201ENST00000616452 154 ntBASIC1.09□□□□□ -2.23
LBX1P52954 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.09□□□□□ -2.23
LBX1P52954 RNU6-888P-201ENST00000363010 101 ntBASIC1.08□□□□□ -2.24
LBX1P52954 SNORD27-201ENST00000363981 72 ntBASIC1.08□□□□□ -2.24
LBX1P52954 SNORA24-201ENST00000384096 131 ntBASIC1.08□□□□□ -2.24
LBX1P52954 Y_RNA.547-201ENST00000384654 119 ntBASIC1.08□□□□□ -2.24
LBX1P52954 MT-TG-201ENST00000387429 68 ntBASIC1.08□□□□□ -2.24
LBX1P52954 MT-TT-201ENST00000387460 66 ntBASIC1.08□□□□□ -2.24
LBX1P52954 MIR1302-7-201ENST00000408841 72 ntBASIC1.08□□□□□ -2.24
LBX1P52954 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.08□□□□□ -2.24
LBX1P52954 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.08□□□□□ -2.24
LBX1P52954 Y_RNA.679-201ENST00000516416 91 ntBASIC1.08□□□□□ -2.24
LBX1P52954 RNU6-126P-201ENST00000516685 103 ntBASIC1.08□□□□□ -2.24
LBX1P52954 SNORA18.7-201ENST00000516910 131 ntBASIC1.08□□□□□ -2.24
LBX1P52954 RNU6-111P-201ENST00000517179 105 ntBASIC1.08□□□□□ -2.24
LBX1P52954 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
LBX1P52954 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
LBX1P52954 Y_RNA.54-201ENST00000362766 105 ntBASIC1.07□□□□□ -2.24
LBX1P52954 RNA5SP48-201ENST00000363969 126 ntBASIC1.07□□□□□ -2.24
LBX1P52954 Y_RNA.435-201ENST00000384095 112 ntBASIC1.07□□□□□ -2.24
LBX1P52954 Y_RNA.477-201ENST00000384352 108 ntBASIC1.07□□□□□ -2.24
LBX1P52954 RNU6-1228P-201ENST00000391014 107 ntBASIC1.07□□□□□ -2.24
LBX1P52954 RNU6-938P-201ENST00000411285 103 ntBASIC1.07□□□□□ -2.24
LBX1P52954 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.07□□□□□ -2.24
LBX1P52954 SNORD79.1-201ENST00000516069 84 ntBASIC1.07□□□□□ -2.24
LBX1P52954 RNA5SP153-201ENST00000516498 76 ntBASIC1.07□□□□□ -2.24
LBX1P52954 MIR4711-201ENST00000578274 70 ntBASIC1.07□□□□□ -2.24
LBX1P52954 MIR4308-201ENST00000580634 81 ntBASIC1.07□□□□□ -2.24
LBX1P52954 MIR548AR-201ENST00000582191 57 ntBASIC1.07□□□□□ -2.24
LBX1P52954 AC009779.6-201ENST00000603972 165 ntBASIC1.07□□□□□ -2.24
LBX1P52954 AL022345.2-201ENST00000606307 135 ntBASIC1.07□□□□□ -2.24
LBX1P52954 AC108706.1-201ENST00000611053 297 ntBASIC1.07□□□□□ -2.24
LBX1P52954 Y_RNA.91-201ENST00000363042 107 ntBASIC1.06□□□□□ -2.24
LBX1P52954 SNORD45.3-201ENST00000363836 72 ntBASIC1.06□□□□□ -2.24
LBX1P52954 RNY4P3-201ENST00000365254 95 ntBASIC1.06□□□□□ -2.24
LBX1P52954 MIR19B1-201ENST00000384829 87 ntBASIC1.06□□□□□ -2.24
LBX1P52954 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
LBX1P52954 SNORD12-201ENST00000391002 90 ntBASIC1.06□□□□□ -2.24
LBX1P52954 U8.17-201ENST00000391292 132 ntBASIC1.06□□□□□ -2.24
LBX1P52954 MIR1185-1-201ENST00000408598 86 ntBASIC1.06□□□□□ -2.24
LBX1P52954 Y_RNA.626-201ENST00000411288 95 ntBASIC1.06□□□□□ -2.24
LBX1P52954 RPS29P28-201ENST00000446439 141 ntBASIC1.06□□□□□ -2.24
LBX1P52954 AL392103.1-201ENST00000447000 198 ntBASIC1.06□□□□□ -2.24
LBX1P52954 SNRPGP8-201ENST00000454064 226 ntBASIC1.06□□□□□ -2.24
LBX1P52954 Y_RNA.666-201ENST00000516187 112 ntBASIC1.06□□□□□ -2.24
LBX1P52954 AC015726.2-201ENST00000620112 122 ntBASIC1.06□□□□□ -2.24
LBX1P52954 MIR8065-201ENST00000620577 100 ntBASIC1.06□□□□□ -2.24
LBX1P52954 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.05□□□□□ -2.24
LBX1P52954 RNU6-103P-201ENST00000363686 107 ntBASIC1.05□□□□□ -2.24
LBX1P52954 RNU1-124P-201ENST00000363861 145 ntBASIC1.05□□□□□ -2.24
LBX1P52954 Y_RNA.634-201ENST00000364811 113 ntBASIC1.05□□□□□ -2.24
LBX1P52954 SNORD61-201ENST00000384252 73 ntBASIC1.05□□□□□ -2.24
LBX1P52954 SNORA25-201ENST00000384384 134 ntBASIC1.05□□□□□ -2.24
LBX1P52954 AL606845.1-201ENST00000404881 255 ntBASIC1.05□□□□□ -2.24
LBX1P52954 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.05□□□□□ -2.24
LBX1P52954 MRPL35P3-201ENST00000421557 364 ntBASIC1.05□□□□□ -2.24
LBX1P52954 AC004941.2-201ENST00000427009 228 ntBASIC1.05□□□□□ -2.24
LBX1P52954 AC023449.1-201ENST00000454464 154 ntBASIC1.05□□□□□ -2.24
LBX1P52954 RPL39P39-201ENST00000455840 151 ntBASIC1.05□□□□□ -2.24
LBX1P52954 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.04□□□□□ -2.24
LBX1P52954 SNORA9.1-201ENST00000362412 131 ntBASIC1.04□□□□□ -2.24
LBX1P52954 Y_RNA.121-201ENST00000363309 113 ntBASIC1.04□□□□□ -2.24
LBX1P52954 SNORA25.8-201ENST00000364831 128 ntBASIC1.04□□□□□ -2.24
LBX1P52954 MIR520C-201ENST00000385005 87 ntBASIC1.04□□□□□ -2.24
LBX1P52954 SNORA75.2-201ENST00000391138 150 ntBASIC1.04□□□□□ -2.24
LBX1P52954 SNORA75.3-201ENST00000391231 150 ntBASIC1.04□□□□□ -2.24
LBX1P52954 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.04□□□□□ -2.24
LBX1P52954 RNU6-561P-201ENST00000516222 102 ntBASIC1.04□□□□□ -2.24
LBX1P52954 RNU6-947P-201ENST00000516264 106 ntBASIC1.04□□□□□ -2.24
LBX1P52954 SNORD115-34-201ENST00000362441 82 ntBASIC1.03□□□□□ -2.24
LBX1P52954 SNORD115-12-201ENST00000362583 82 ntBASIC1.03□□□□□ -2.24
LBX1P52954 SNORD115-29-201ENST00000362834 82 ntBASIC1.03□□□□□ -2.24
LBX1P52954 SNORD115-9-201ENST00000362912 82 ntBASIC1.03□□□□□ -2.24
LBX1P52954 SNORD115-21-201ENST00000362963 81 ntBASIC1.03□□□□□ -2.24
LBX1P52954 SNORD115-14-201ENST00000363090 81 ntBASIC1.03□□□□□ -2.24
LBX1P52954 SNORD115-13-201ENST00000363358 82 ntBASIC1.03□□□□□ -2.24
LBX1P52954 SNORD115-41-201ENST00000363608 82 ntBASIC1.03□□□□□ -2.24
LBX1P52954 SNORD115-11-201ENST00000363616 82 ntBASIC1.03□□□□□ -2.24
LBX1P52954 SNORD115-5-201ENST00000363633 82 ntBASIC1.03□□□□□ -2.24
LBX1P52954 SNORD115-39-201ENST00000363694 82 ntBASIC1.03□□□□□ -2.24
LBX1P52954 SNORD115-4-201ENST00000363810 82 ntBASIC1.03□□□□□ -2.24
LBX1P52954 SNORD115-16-201ENST00000363887 82 ntBASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms