Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 AL445646.1-201ENST00000431784 216 ntBASIC2.2□□□□□ -2.06
MRE11P49959 CYCTP-201ENST00000504253 315 ntBASIC2.2□□□□□ -2.06
MRE11P49959 RNA5SP61-201ENST00000516453 100 ntBASIC2.2□□□□□ -2.06
MRE11P49959 IGKV1-22-201ENST00000524313 326 ntBASIC2.2□□□□□ -2.06
MRE11P49959 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.2□□□□□ -2.06
MRE11P49959 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC2.2□□□□□ -2.06
MRE11P49959 PVT1_3.1-201ENST00000620853 95 ntBASIC2.2□□□□□ -2.06
MRE11P49959 AL391516.1-201ENST00000554380 2449 ntBASIC2.2□□□□□ -2.06
MRE11P49959 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
MRE11P49959 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
MRE11P49959 Y_RNA.30-201ENST00000362572 97 ntBASIC2.19□□□□□ -2.06
MRE11P49959 SNORA4.2-201ENST00000365313 147 ntBASIC2.19□□□□□ -2.06
MRE11P49959 RNU6-163P-201ENST00000384396 106 ntBASIC2.19□□□□□ -2.06
MRE11P49959 RNA5SP212-201ENST00000391223 107 ntBASIC2.19□□□□□ -2.06
MRE11P49959 RN7SKP200-201ENST00000410564 320 ntBASIC2.19□□□□□ -2.06
MRE11P49959 RNU6-938P-201ENST00000411285 103 ntBASIC2.19□□□□□ -2.06
MRE11P49959 RPL23AP63-201ENST00000498752 471 ntBASIC2.19□□□□□ -2.06
MRE11P49959 RNA5SP182-201ENST00000516064 82 ntBASIC2.19□□□□□ -2.06
MRE11P49959 RNU6-113P-201ENST00000516653 101 ntBASIC2.19□□□□□ -2.06
MRE11P49959 SNORD36C-201ENST00000516733 66 ntBASIC2.19□□□□□ -2.06
MRE11P49959 AC015726.2-201ENST00000620112 122 ntBASIC2.19□□□□□ -2.06
MRE11P49959 AC027279.3-201ENST00000625055 122 ntBASIC2.19□□□□□ -2.06
MRE11P49959 SNORD48-201ENST00000364953 64 ntBASIC2.18□□□□□ -2.06
MRE11P49959 SNORA2.2-201ENST00000365473 135 ntBASIC2.18□□□□□ -2.06
MRE11P49959 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
MRE11P49959 AL034345.1-201ENST00000407768 123 ntBASIC2.18□□□□□ -2.06
MRE11P49959 CALM2P4-201ENST00000430810 426 ntBASIC2.18□□□□□ -2.06
MRE11P49959 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.18□□□□□ -2.06
MRE11P49959 RNU6-589P-201ENST00000516485 107 ntBASIC2.18□□□□□ -2.06
MRE11P49959 Y_RNA.709-201ENST00000516952 92 ntBASIC2.18□□□□□ -2.06
MRE11P49959 DNAJC19P9-201ENST00000555084 351 ntBASIC2.18□□□□□ -2.06
MRE11P49959 SUB1P4-201ENST00000566062 339 ntBASIC2.18□□□□□ -2.06
MRE11P49959 AL670379.3-201ENST00000605040 251 ntBASIC2.18□□□□□ -2.06
MRE11P49959 AC025166.1-201ENST00000612411 163 ntBASIC2.18□□□□□ -2.06
MRE11P49959 U1.36-201ENST00000620684 176 ntBASIC2.18□□□□□ -2.06
MRE11P49959 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
MRE11P49959 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
MRE11P49959 AL442644.1-201ENST00000454390 3105 ntBASIC2.17□□□□□ -2.06
MRE11P49959 RNU6-153P-201ENST00000364422 104 ntBASIC2.17□□□□□ -2.06
MRE11P49959 Y_RNA.327-201ENST00000365201 102 ntBASIC2.17□□□□□ -2.06
MRE11P49959 RNU6-950P-201ENST00000384651 107 ntBASIC2.17□□□□□ -2.06
MRE11P49959 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
MRE11P49959 U8.16-201ENST00000391279 133 ntBASIC2.17□□□□□ -2.06
MRE11P49959 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.17□□□□□ -2.06
MRE11P49959 RNA5SP501-201ENST00000410990 112 ntBASIC2.17□□□□□ -2.06
MRE11P49959 RNA5SP437-201ENST00000517249 129 ntBASIC2.17□□□□□ -2.06
MRE11P49959 SNORA63.4-201ENST00000362763 126 ntBASIC2.16□□□□□ -2.06
MRE11P49959 Y_RNA.346-201ENST00000365385 112 ntBASIC2.16□□□□□ -2.06
MRE11P49959 Y_RNA.440-201ENST00000384120 114 ntBASIC2.16□□□□□ -2.06
MRE11P49959 RNU6-424P-201ENST00000384367 105 ntBASIC2.16□□□□□ -2.06
MRE11P49959 SNORD38C-201ENST00000384381 69 ntBASIC2.16□□□□□ -2.06
MRE11P49959 RNU6-1031P-201ENST00000384773 107 ntBASIC2.16□□□□□ -2.06
MRE11P49959 MIR520A-201ENST00000384862 85 ntBASIC2.16□□□□□ -2.06
MRE11P49959 MIR548A3-201ENST00000385297 97 ntBASIC2.16□□□□□ -2.06
MRE11P49959 RNA5SP450-201ENST00000411206 102 ntBASIC2.16□□□□□ -2.06
MRE11P49959 RNA5SP168-201ENST00000516642 112 ntBASIC2.16□□□□□ -2.06
MRE11P49959 AL773524.1-201ENST00000614065 229 ntBASIC2.16□□□□□ -2.06
MRE11P49959 AC022709.1-201ENST00000615967 87 ntBASIC2.16□□□□□ -2.06
MRE11P49959 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.16□□□□□ -2.06
MRE11P49959 ICE2P2-201ENST00000483823 2787 ntBASIC2.15□□□□□ -2.06
MRE11P49959 MTND5P18-201ENST00000445624 1801 ntBASIC2.15□□□□□ -2.06
MRE11P49959 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.15□□□□□ -2.07
MRE11P49959 RNU6-112P-201ENST00000363599 104 ntBASIC2.15□□□□□ -2.07
MRE11P49959 SNORA16.1-201ENST00000364597 132 ntBASIC2.15□□□□□ -2.07
MRE11P49959 RNU6-392P-201ENST00000364926 101 ntBASIC2.15□□□□□ -2.07
MRE11P49959 Y_RNA.366-201ENST00000365540 102 ntBASIC2.15□□□□□ -2.07
MRE11P49959 RNU6-296P-201ENST00000384608 107 ntBASIC2.15□□□□□ -2.07
MRE11P49959 MIR1263-201ENST00000408324 86 ntBASIC2.15□□□□□ -2.07
MRE11P49959 AC087499.4-201ENST00000448505 178 ntBASIC2.15□□□□□ -2.07
MRE11P49959 RPS26P48-201ENST00000491713 339 ntBASIC2.15□□□□□ -2.07
MRE11P49959 AP003484.1-201ENST00000530974 250 ntBASIC2.15□□□□□ -2.07
MRE11P49959 AL121890.5-201ENST00000620848 304 ntBASIC2.15□□□□□ -2.07
MRE11P49959 RNU6-833P-201ENST00000363486 107 ntBASIC2.14□□□□□ -2.07
MRE11P49959 SNORD116-21-201ENST00000384507 92 ntBASIC2.14□□□□□ -2.07
MRE11P49959 PDCD5P2-201ENST00000507570 312 ntBASIC2.14□□□□□ -2.07
MRE11P49959 MIR4299-201ENST00000577899 72 ntBASIC2.14□□□□□ -2.07
MRE11P49959 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.14□□□□□ -2.07
MRE11P49959 AL137067.1-201ENST00000615933 120 ntBASIC2.14□□□□□ -2.07
MRE11P49959 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.14□□□□□ -2.07
MRE11P49959 RNU2-7P-201ENST00000410794 178 ntBASIC2.13□□□□□ -2.07
MRE11P49959 AC244636.1-201ENST00000421152 228 ntBASIC2.13□□□□□ -2.07
MRE11P49959 HMGN1P33-201ENST00000432945 451 ntBASIC2.13□□□□□ -2.07
MRE11P49959 AC015922.2-201ENST00000435593 184 ntBASIC2.13□□□□□ -2.07
MRE11P49959 RNU6-240P-201ENST00000516098 97 ntBASIC2.13□□□□□ -2.07
MRE11P49959 RNU6-830P-201ENST00000516353 107 ntBASIC2.13□□□□□ -2.07
MRE11P49959 SNORA25.15-201ENST00000516487 89 ntBASIC2.13□□□□□ -2.07
MRE11P49959 MIR4285-201ENST00000581001 85 ntBASIC2.13□□□□□ -2.07
MRE11P49959 SNRPGP19-201ENST00000603826 189 ntBASIC2.13□□□□□ -2.07
MRE11P49959 Y_RNA.783-201ENST00000613546 102 ntBASIC2.13□□□□□ -2.07
MRE11P49959 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.13□□□□□ -2.07
MRE11P49959 ZNF355P-201ENST00000427301 3216 ntBASIC2.13□□□□□ -2.07
MRE11P49959 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
MRE11P49959 RNU6-349P-201ENST00000362402 107 ntBASIC2.12□□□□□ -2.07
MRE11P49959 Y_RNA.35-201ENST00000362601 101 ntBASIC2.12□□□□□ -2.07
MRE11P49959 AC063976.4-201ENST00000421971 163 ntBASIC2.12□□□□□ -2.07
MRE11P49959 Y_RNA.649-201ENST00000459077 103 ntBASIC2.12□□□□□ -2.07
MRE11P49959 RNU7-12P-201ENST00000516030 62 ntBASIC2.12□□□□□ -2.07
MRE11P49959 SNORA18.7-201ENST00000516910 131 ntBASIC2.12□□□□□ -2.07
MRE11P49959 MIR4419B-201ENST00000577260 68 ntBASIC2.12□□□□□ -2.07
MRE11P49959 MIR3683-201ENST00000580847 82 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms