Protein–RNA interactions for Protein: P49761

CLK3, Dual specificity protein kinase CLK3, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P49761 AL162726.3-218ENST00000636401 95 ntBASIC1.94□□□□□ -2.1
CLK3P49761 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.93□□□□□ -2.1
CLK3P49761 SNORA27-201ENST00000384323 126 ntBASIC1.93□□□□□ -2.1
CLK3P49761 SNORA3.2-201ENST00000408221 125 ntBASIC1.93□□□□□ -2.1
CLK3P49761 MIR1912-201ENST00000410389 80 ntBASIC1.93□□□□□ -2.1
CLK3P49761 AC069257.2-201ENST00000441819 155 ntBASIC1.93□□□□□ -2.1
CLK3P49761 RN7SL274P-201ENST00000492268 272 ntBASIC1.93□□□□□ -2.1
CLK3P49761 RPL23AP94-201ENST00000512518 302 ntBASIC1.93□□□□□ -2.1
CLK3P49761 RNU6-904P-201ENST00000516206 101 ntBASIC1.93□□□□□ -2.1
CLK3P49761 RNU6-109P-201ENST00000516364 107 ntBASIC1.93□□□□□ -2.1
CLK3P49761 RNU6-184P-201ENST00000516514 107 ntBASIC1.93□□□□□ -2.1
CLK3P49761 AL773524.1-201ENST00000614065 229 ntBASIC1.93□□□□□ -2.1
CLK3P49761 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
CLK3P49761 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
CLK3P49761 SNORD115-34-201ENST00000362441 82 ntBASIC1.92□□□□□ -2.1
CLK3P49761 SNORD115-12-201ENST00000362583 82 ntBASIC1.92□□□□□ -2.1
CLK3P49761 SNORD115-29-201ENST00000362834 82 ntBASIC1.92□□□□□ -2.1
CLK3P49761 SNORD115-9-201ENST00000362912 82 ntBASIC1.92□□□□□ -2.1
CLK3P49761 SNORD115-21-201ENST00000362963 81 ntBASIC1.92□□□□□ -2.1
CLK3P49761 SNORD115-14-201ENST00000363090 81 ntBASIC1.92□□□□□ -2.1
CLK3P49761 SNORD115-13-201ENST00000363358 82 ntBASIC1.92□□□□□ -2.1
CLK3P49761 SNORD115-41-201ENST00000363608 82 ntBASIC1.92□□□□□ -2.1
CLK3P49761 SNORD115-11-201ENST00000363616 82 ntBASIC1.92□□□□□ -2.1
CLK3P49761 SNORD115-5-201ENST00000363633 82 ntBASIC1.92□□□□□ -2.1
CLK3P49761 SNORD115-39-201ENST00000363694 82 ntBASIC1.92□□□□□ -2.1
CLK3P49761 SNORD115-4-201ENST00000363810 82 ntBASIC1.92□□□□□ -2.1
CLK3P49761 SNORD115-16-201ENST00000363887 82 ntBASIC1.92□□□□□ -2.1
CLK3P49761 SNORD115-6-201ENST00000363942 82 ntBASIC1.92□□□□□ -2.1
CLK3P49761 SNORD115-42-201ENST00000364273 82 ntBASIC1.92□□□□□ -2.1
CLK3P49761 Y_RNA.241-201ENST00000364470 117 ntBASIC1.92□□□□□ -2.1
CLK3P49761 SNORD115-15-201ENST00000364809 81 ntBASIC1.92□□□□□ -2.1
CLK3P49761 SNORD115-1-201ENST00000364961 82 ntBASIC1.92□□□□□ -2.1
CLK3P49761 SNORD115-26-201ENST00000365067 82 ntBASIC1.92□□□□□ -2.1
CLK3P49761 SNORD115-10-201ENST00000365073 81 ntBASIC1.92□□□□□ -2.1
CLK3P49761 SNORD115-43-201ENST00000365503 82 ntBASIC1.92□□□□□ -2.1
CLK3P49761 SNORD115-36-201ENST00000365629 82 ntBASIC1.92□□□□□ -2.1
CLK3P49761 RNU6-424P-201ENST00000384367 105 ntBASIC1.92□□□□□ -2.1
CLK3P49761 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
CLK3P49761 RN7SKP200-201ENST00000410564 320 ntBASIC1.92□□□□□ -2.1
CLK3P49761 RN7SKP223-201ENST00000410582 62 ntBASIC1.92□□□□□ -2.1
CLK3P49761 SNORA19.1-201ENST00000410656 129 ntBASIC1.92□□□□□ -2.1
CLK3P49761 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.92□□□□□ -2.1
CLK3P49761 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.92□□□□□ -2.1
CLK3P49761 MTATP8P2-201ENST00000435212 202 ntBASIC1.92□□□□□ -2.1
CLK3P49761 RNU7-96P-201ENST00000459535 64 ntBASIC1.92□□□□□ -2.1
CLK3P49761 RNU6-998P-201ENST00000515894 101 ntBASIC1.92□□□□□ -2.1
CLK3P49761 SNORA31.10-201ENST00000516482 106 ntBASIC1.92□□□□□ -2.1
CLK3P49761 RNU6-1116P-201ENST00000517269 99 ntBASIC1.92□□□□□ -2.1
CLK3P49761 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.92□□□□□ -2.1
CLK3P49761 AL096840.1-201ENST00000603287 93 ntBASIC1.92□□□□□ -2.1
CLK3P49761 SNORD115-40-201ENST00000606510 82 ntBASIC1.92□□□□□ -2.1
CLK3P49761 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.92□□□□□ -2.1
CLK3P49761 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
CLK3P49761 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.91□□□□□ -2.1
CLK3P49761 MIR302B-201ENST00000362188 73 ntBASIC1.91□□□□□ -2.1
CLK3P49761 MIR488-201ENST00000365739 83 ntBASIC1.91□□□□□ -2.1
CLK3P49761 SNORA70B-201ENST00000384210 135 ntBASIC1.91□□□□□ -2.1
CLK3P49761 MIR520A-201ENST00000384862 85 ntBASIC1.91□□□□□ -2.1
CLK3P49761 SNORA26.2-201ENST00000390922 122 ntBASIC1.91□□□□□ -2.1
CLK3P49761 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.91□□□□□ -2.1
CLK3P49761 RNA5SP144-201ENST00000410846 116 ntBASIC1.91□□□□□ -2.1
CLK3P49761 RNA5SP100-201ENST00000410903 110 ntBASIC1.91□□□□□ -2.1
CLK3P49761 RNA5SP59-201ENST00000410922 110 ntBASIC1.91□□□□□ -2.1
CLK3P49761 AC244636.1-201ENST00000421152 228 ntBASIC1.91□□□□□ -2.1
CLK3P49761 SNX2P2-201ENST00000424553 323 ntBASIC1.91□□□□□ -2.1
CLK3P49761 AC015922.2-201ENST00000435593 184 ntBASIC1.91□□□□□ -2.1
CLK3P49761 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.91□□□□□ -2.1
CLK3P49761 RPL23AP6-201ENST00000446637 472 ntBASIC1.91□□□□□ -2.1
CLK3P49761 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.91□□□□□ -2.1
CLK3P49761 RNU7-6P-201ENST00000516845 62 ntBASIC1.91□□□□□ -2.1
CLK3P49761 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.91□□□□□ -2.1
CLK3P49761 AC141557.1-201ENST00000540982 400 ntBASIC1.91□□□□□ -2.1
CLK3P49761 HSPE1P19-201ENST00000603327 295 ntBASIC1.91□□□□□ -2.1
CLK3P49761 AL627230.6-201ENST00000611129 280 ntBASIC1.91□□□□□ -2.1
CLK3P49761 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.91□□□□□ -2.1
CLK3P49761 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.91□□□□□ -2.1
CLK3P49761 AC092881.1-201ENST00000638218 2733 ntBASIC1.9□□□□□ -2.1
CLK3P49761 MIR342-201ENST00000362212 99 ntBASIC1.9□□□□□ -2.11
CLK3P49761 Y_RNA.93-201ENST00000363066 109 ntBASIC1.9□□□□□ -2.11
CLK3P49761 RNU6-833P-201ENST00000363486 107 ntBASIC1.9□□□□□ -2.11
CLK3P49761 RNU6-112P-201ENST00000363599 104 ntBASIC1.9□□□□□ -2.11
CLK3P49761 Y_RNA.220-201ENST00000364244 109 ntBASIC1.9□□□□□ -2.11
CLK3P49761 RNU4-16P-201ENST00000364737 141 ntBASIC1.9□□□□□ -2.11
CLK3P49761 RNU6-950P-201ENST00000384651 107 ntBASIC1.9□□□□□ -2.11
CLK3P49761 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
CLK3P49761 RNU6-816P-201ENST00000390914 107 ntBASIC1.9□□□□□ -2.11
CLK3P49761 RNU6-1268P-201ENST00000391214 107 ntBASIC1.9□□□□□ -2.11
CLK3P49761 RNU6-1239P-201ENST00000391310 107 ntBASIC1.9□□□□□ -2.11
CLK3P49761 AL034345.1-201ENST00000407768 123 ntBASIC1.9□□□□□ -2.11
CLK3P49761 RNU2-7P-201ENST00000410794 178 ntBASIC1.9□□□□□ -2.11
CLK3P49761 RNY4P29-201ENST00000410801 97 ntBASIC1.9□□□□□ -2.11
CLK3P49761 RPL39P25-201ENST00000449384 154 ntBASIC1.9□□□□□ -2.11
CLK3P49761 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.9□□□□□ -2.11
CLK3P49761 MIR4648-201ENST00000580107 72 ntBASIC1.9□□□□□ -2.11
CLK3P49761 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.9□□□□□ -2.11
CLK3P49761 ICE2P2-201ENST00000483823 2787 ntBASIC1.89□□□□□ -2.11
CLK3P49761 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.89□□□□□ -2.11
CLK3P49761 RNU6-661P-201ENST00000362409 107 ntBASIC1.89□□□□□ -2.11
CLK3P49761 MIR676-201ENST00000390702 67 ntBASIC1.89□□□□□ -2.11
CLK3P49761 SUMO2P12-201ENST00000405924 140 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 190.1 ms