Protein–RNA interactions for Protein: P49642

PRIM1, DNA primase small subunit, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1P49642 AC006160.2-201ENST00000637708 154 ntBASIC3.61□□□□□ -1.83
PRIM1P49642 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PRIM1P49642 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.6□□□□□ -1.83
PRIM1P49642 RNU6-509P-201ENST00000363519 107 ntBASIC3.6□□□□□ -1.83
PRIM1P49642 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
PRIM1P49642 Y_RNA.611-201ENST00000410682 108 ntBASIC3.6□□□□□ -1.83
PRIM1P49642 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC3.6□□□□□ -1.83
PRIM1P49642 AP004217.1-201ENST00000480579 346 ntBASIC3.6□□□□□ -1.83
PRIM1P49642 AC243994.1-201ENST00000618627 109 ntBASIC3.6□□□□□ -1.83
PRIM1P49642 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.6□□□□□ -1.83
PRIM1P49642 Y_RNA.537-201ENST00000384626 109 ntBASIC3.59□□□□□ -1.83
PRIM1P49642 RN7SL633P-201ENST00000488974 297 ntBASIC3.59□□□□□ -1.83
PRIM1P49642 AC103810.6-201ENST00000606708 136 ntBASIC3.59□□□□□ -1.83
PRIM1P49642 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
PRIM1P49642 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
PRIM1P49642 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.59□□□□□ -1.84
PRIM1P49642 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
PRIM1P49642 AC092435.3-201ENST00000565538 3654 ntBASIC3.58□□□□□ -1.84
PRIM1P49642 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
PRIM1P49642 RNU6-633P-201ENST00000362612 103 ntBASIC3.58□□□□□ -1.84
PRIM1P49642 Y_RNA.140-201ENST00000363474 103 ntBASIC3.58□□□□□ -1.84
PRIM1P49642 RNU1-109P-201ENST00000383960 147 ntBASIC3.58□□□□□ -1.84
PRIM1P49642 SNORA3.2-201ENST00000408221 125 ntBASIC3.58□□□□□ -1.84
PRIM1P49642 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC3.58□□□□□ -1.84
PRIM1P49642 RNU6-1006P-201ENST00000516998 103 ntBASIC3.58□□□□□ -1.84
PRIM1P49642 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC3.58□□□□□ -1.84
PRIM1P49642 MIR4791-201ENST00000607666 84 ntBASIC3.58□□□□□ -1.84
PRIM1P49642 AC022513.1-201ENST00000624512 117 ntBASIC3.58□□□□□ -1.84
PRIM1P49642 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
PRIM1P49642 SNORD38.2-201ENST00000384470 69 ntBASIC3.57□□□□□ -1.84
PRIM1P49642 RNU6-1031P-201ENST00000384773 107 ntBASIC3.57□□□□□ -1.84
PRIM1P49642 RNU6-447P-201ENST00000410293 104 ntBASIC3.57□□□□□ -1.84
PRIM1P49642 RNU6-1118P-201ENST00000410382 104 ntBASIC3.57□□□□□ -1.84
PRIM1P49642 RNU6-1076P-201ENST00000410397 104 ntBASIC3.57□□□□□ -1.84
PRIM1P49642 RNU6-355P-201ENST00000410427 104 ntBASIC3.57□□□□□ -1.84
PRIM1P49642 RNU6-791P-201ENST00000410467 104 ntBASIC3.57□□□□□ -1.84
PRIM1P49642 RNU6-705P-201ENST00000410601 104 ntBASIC3.57□□□□□ -1.84
PRIM1P49642 RNU6-1100P-201ENST00000410691 104 ntBASIC3.57□□□□□ -1.84
PRIM1P49642 RNU6-860P-201ENST00000410860 104 ntBASIC3.57□□□□□ -1.84
PRIM1P49642 RNU6-1217P-201ENST00000411276 104 ntBASIC3.57□□□□□ -1.84
PRIM1P49642 RNU6-785P-201ENST00000411324 104 ntBASIC3.57□□□□□ -1.84
PRIM1P49642 snoU13.16-201ENST00000459350 104 ntBASIC3.57□□□□□ -1.84
PRIM1P49642 snoU13.26-201ENST00000459452 105 ntBASIC3.57□□□□□ -1.84
PRIM1P49642 IGHVIII-5-1-201ENST00000523059 99 ntBASIC3.57□□□□□ -1.84
PRIM1P49642 U6.90-201ENST00000614007 104 ntBASIC3.57□□□□□ -1.84
PRIM1P49642 MIR376B-201ENST00000614515 100 ntBASIC3.57□□□□□ -1.84
PRIM1P49642 U6.70-201ENST00000620287 104 ntBASIC3.57□□□□□ -1.84
PRIM1P49642 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
PRIM1P49642 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
PRIM1P49642 Y_RNA.4-201ENST00000362333 112 ntBASIC3.56□□□□□ -1.84
PRIM1P49642 RNU6-1125P-201ENST00000363601 107 ntBASIC3.56□□□□□ -1.84
PRIM1P49642 SNORA32-201ENST00000384072 121 ntBASIC3.56□□□□□ -1.84
PRIM1P49642 RPS29P28-201ENST00000446439 141 ntBASIC3.56□□□□□ -1.84
PRIM1P49642 MIR1270-201ENST00000459320 83 ntBASIC3.56□□□□□ -1.84
PRIM1P49642 AC103810.7-201ENST00000607821 91 ntBASIC3.56□□□□□ -1.84
PRIM1P49642 MIR548BB-201ENST00000626714 66 ntBASIC3.56□□□□□ -1.84
PRIM1P49642 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
PRIM1P49642 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
PRIM1P49642 RNU6-776P-201ENST00000364403 104 ntBASIC3.55□□□□□ -1.84
PRIM1P49642 RNU6-1022P-201ENST00000365049 104 ntBASIC3.55□□□□□ -1.84
PRIM1P49642 MIR516B2-201ENST00000385190 85 ntBASIC3.55□□□□□ -1.84
PRIM1P49642 AL513423.1-201ENST00000621695 132 ntBASIC3.55□□□□□ -1.84
PRIM1P49642 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.55□□□□□ -1.84
PRIM1P49642 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PRIM1P49642 U8.2-201ENST00000363156 134 ntBASIC3.54□□□□□ -1.84
PRIM1P49642 AL161932.1-201ENST00000437408 146 ntBASIC3.54□□□□□ -1.84
PRIM1P49642 RPS29P6-201ENST00000438196 145 ntBASIC3.54□□□□□ -1.84
PRIM1P49642 HSPE1P9-201ENST00000440046 311 ntBASIC3.54□□□□□ -1.84
PRIM1P49642 MIR5094-201ENST00000578766 85 ntBASIC3.54□□□□□ -1.84
PRIM1P49642 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PRIM1P49642 MIR504-201ENST00000385065 83 ntBASIC3.53□□□□□ -1.84
PRIM1P49642 RNA5SP344-201ENST00000411081 104 ntBASIC3.53□□□□□ -1.84
PRIM1P49642 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC3.53□□□□□ -1.84
PRIM1P49642 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.53□□□□□ -1.84
PRIM1P49642 snoU13.15-201ENST00000459407 104 ntBASIC3.53□□□□□ -1.84
PRIM1P49642 SNORD123-201ENST00000459473 70 ntBASIC3.53□□□□□ -1.84
PRIM1P49642 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC3.53□□□□□ -1.84
PRIM1P49642 MIR4769-201ENST00000584126 77 ntBASIC3.53□□□□□ -1.84
PRIM1P49642 RNU6-86P-201ENST00000606534 107 ntBASIC3.53□□□□□ -1.84
PRIM1P49642 MIR6733-201ENST00000635723 61 ntBASIC3.53□□□□□ -1.84
PRIM1P49642 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.85
PRIM1P49642 ZNF658B-202ENST00000615961 3375 ntBASIC3.52□□□□□ -1.85
PRIM1P49642 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
PRIM1P49642 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.52□□□□□ -1.85
PRIM1P49642 RNU6-865P-201ENST00000364772 107 ntBASIC3.52□□□□□ -1.85
PRIM1P49642 RPS12P2-201ENST00000439728 269 ntBASIC3.52□□□□□ -1.85
PRIM1P49642 MIR3126-201ENST00000577443 74 ntBASIC3.52□□□□□ -1.85
PRIM1P49642 MIR4524B-201ENST00000581569 115 ntBASIC3.52□□□□□ -1.85
PRIM1P49642 AP000648.3-201ENST00000623539 4507 ntBASIC3.51□□□□□ -1.85
PRIM1P49642 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC3.51□□□□□ -1.85
PRIM1P49642 RNA5SP289-201ENST00000362332 137 ntBASIC3.51□□□□□ -1.85
PRIM1P49642 SNORD115-3-201ENST00000363100 82 ntBASIC3.51□□□□□ -1.85
PRIM1P49642 RNU6-1163P-201ENST00000364516 107 ntBASIC3.51□□□□□ -1.85
PRIM1P49642 RNU6-652P-201ENST00000365488 107 ntBASIC3.51□□□□□ -1.85
PRIM1P49642 MIR520A-201ENST00000384862 85 ntBASIC3.51□□□□□ -1.85
PRIM1P49642 MIR512-1-201ENST00000384913 84 ntBASIC3.51□□□□□ -1.85
PRIM1P49642 RNA5SP481-201ENST00000516814 122 ntBASIC3.51□□□□□ -1.85
PRIM1P49642 RNU7-35P-201ENST00000517174 62 ntBASIC3.51□□□□□ -1.85
PRIM1P49642 RNU6-90P-201ENST00000606352 106 ntBASIC3.51□□□□□ -1.85
PRIM1P49642 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms