Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 MIR518E-201ENST00000385252 88 ntBASIC0.87□□□□□ -2.27
LHX1P48742 RNU6-1228P-201ENST00000391014 107 ntBASIC0.87□□□□□ -2.27
LHX1P48742 SNORA40.5-201ENST00000391061 128 ntBASIC0.87□□□□□ -2.27
LHX1P48742 SNORD111-201ENST00000408139 94 ntBASIC0.87□□□□□ -2.27
LHX1P48742 RNU6-613P-201ENST00000410412 108 ntBASIC0.87□□□□□ -2.27
LHX1P48742 RNU6-994P-201ENST00000410507 111 ntBASIC0.87□□□□□ -2.27
LHX1P48742 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.87□□□□□ -2.27
LHX1P48742 AC004941.2-201ENST00000427009 228 ntBASIC0.87□□□□□ -2.27
LHX1P48742 snoU13.16-201ENST00000459350 104 ntBASIC0.87□□□□□ -2.27
LHX1P48742 RNU6-351P-201ENST00000516097 100 ntBASIC0.87□□□□□ -2.27
LHX1P48742 RNU6-1045P-201ENST00000516321 107 ntBASIC0.87□□□□□ -2.27
LHX1P48742 RNU6-453P-201ENST00000516819 85 ntBASIC0.87□□□□□ -2.27
LHX1P48742 AP003484.1-201ENST00000530974 250 ntBASIC0.87□□□□□ -2.27
LHX1P48742 MIR4643-201ENST00000577473 78 ntBASIC0.87□□□□□ -2.27
LHX1P48742 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.87□□□□□ -2.27
LHX1P48742 AP000942.4-201ENST00000604811 241 ntBASIC0.87□□□□□ -2.27
LHX1P48742 RNU6-94P-201ENST00000607728 107 ntBASIC0.87□□□□□ -2.27
LHX1P48742 AL442067.1-201ENST00000613261 223 ntBASIC0.87□□□□□ -2.27
LHX1P48742 AC134878.1-201ENST00000619901 243 ntBASIC0.87□□□□□ -2.27
LHX1P48742 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.87□□□□□ -2.27
LHX1P48742 Y_RNA.66-201ENST00000362862 102 ntBASIC0.86□□□□□ -2.27
LHX1P48742 Y_RNA.91-201ENST00000363042 107 ntBASIC0.86□□□□□ -2.27
LHX1P48742 Y_RNA.133-201ENST00000363428 110 ntBASIC0.86□□□□□ -2.27
LHX1P48742 SNORA24-201ENST00000384096 131 ntBASIC0.86□□□□□ -2.27
LHX1P48742 SNORA2B-201ENST00000384583 137 ntBASIC0.86□□□□□ -2.27
LHX1P48742 RNU6-381P-201ENST00000391259 108 ntBASIC0.86□□□□□ -2.27
LHX1P48742 RNA5SP95-201ENST00000410319 137 ntBASIC0.86□□□□□ -2.27
LHX1P48742 RNU6-938P-201ENST00000411285 103 ntBASIC0.86□□□□□ -2.27
LHX1P48742 RPS3AP1-201ENST00000413190 320 ntBASIC0.86□□□□□ -2.27
LHX1P48742 SNRPGP8-201ENST00000454064 226 ntBASIC0.86□□□□□ -2.27
LHX1P48742 AC067940.1-201ENST00000458411 300 ntBASIC0.86□□□□□ -2.27
LHX1P48742 RNA5SP153-201ENST00000516498 76 ntBASIC0.86□□□□□ -2.27
LHX1P48742 AL078603.1-201ENST00000603824 313 ntBASIC0.86□□□□□ -2.27
LHX1P48742 AC108706.1-201ENST00000611053 297 ntBASIC0.86□□□□□ -2.27
LHX1P48742 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.85□□□□□ -2.27
LHX1P48742 RNU6-653P-201ENST00000363074 106 ntBASIC0.85□□□□□ -2.27
LHX1P48742 SNORD45.3-201ENST00000363836 72 ntBASIC0.85□□□□□ -2.27
LHX1P48742 Y_RNA.292-201ENST00000364904 97 ntBASIC0.85□□□□□ -2.27
LHX1P48742 SNORA27-201ENST00000384323 126 ntBASIC0.85□□□□□ -2.27
LHX1P48742 MIR548J-201ENST00000408833 112 ntBASIC0.85□□□□□ -2.27
LHX1P48742 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.85□□□□□ -2.27
LHX1P48742 RPL39P28-201ENST00000465655 155 ntBASIC0.85□□□□□ -2.27
LHX1P48742 RNA5SP255-201ENST00000516370 107 ntBASIC0.85□□□□□ -2.27
LHX1P48742 SNORA18.4-201ENST00000516440 124 ntBASIC0.85□□□□□ -2.27
LHX1P48742 SNORD36C-201ENST00000516733 66 ntBASIC0.85□□□□□ -2.27
LHX1P48742 RNU6-958P-201ENST00000516995 106 ntBASIC0.85□□□□□ -2.27
LHX1P48742 CYP3A137P-201ENST00000562436 69 ntBASIC0.85□□□□□ -2.27
LHX1P48742 Y_RNA.76-201ENST00000362931 109 ntBASIC0.84□□□□□ -2.27
LHX1P48742 RNU1-36P-201ENST00000365130 165 ntBASIC0.84□□□□□ -2.27
LHX1P48742 RNU6-1132P-201ENST00000459214 107 ntBASIC0.84□□□□□ -2.27
LHX1P48742 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.84□□□□□ -2.27
LHX1P48742 RNA5SP220-201ENST00000516298 104 ntBASIC0.84□□□□□ -2.27
LHX1P48742 Y_RNA.673-201ENST00000516306 88 ntBASIC0.84□□□□□ -2.27
LHX1P48742 MIR151B-201ENST00000584249 96 ntBASIC0.84□□□□□ -2.27
LHX1P48742 SNORA4-201ENST00000584302 138 ntBASIC0.84□□□□□ -2.27
LHX1P48742 AP000753.3-201ENST00000604083 169 ntBASIC0.84□□□□□ -2.27
LHX1P48742 Y_RNA.168-201ENST00000363740 102 ntBASIC0.83□□□□□ -2.28
LHX1P48742 MIR568-201ENST00000385036 95 ntBASIC0.83□□□□□ -2.28
LHX1P48742 MT-TN-201ENST00000387400 73 ntBASIC0.83□□□□□ -2.28
LHX1P48742 SNORA79-201ENST00000408376 140 ntBASIC0.83□□□□□ -2.28
LHX1P48742 AF228730.3-201ENST00000436691 102 ntBASIC0.83□□□□□ -2.28
LHX1P48742 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.83□□□□□ -2.28
LHX1P48742 RPS29P24-201ENST00000486345 171 ntBASIC0.83□□□□□ -2.28
LHX1P48742 ACA64.5-201ENST00000516207 127 ntBASIC0.83□□□□□ -2.28
LHX1P48742 RNU7-53P-201ENST00000516705 60 ntBASIC0.83□□□□□ -2.28
LHX1P48742 AC097639.2-201ENST00000603159 172 ntBASIC0.83□□□□□ -2.28
LHX1P48742 MIR6866-201ENST00000638146 69 ntBASIC0.83□□□□□ -2.28
LHX1P48742 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.82□□□□□ -2.28
LHX1P48742 RNU6-103P-201ENST00000363686 107 ntBASIC0.82□□□□□ -2.28
LHX1P48742 SNORD27-201ENST00000363981 72 ntBASIC0.82□□□□□ -2.28
LHX1P48742 RNU6-728P-201ENST00000365375 104 ntBASIC0.82□□□□□ -2.28
LHX1P48742 Y_RNA.562-201ENST00000384695 113 ntBASIC0.82□□□□□ -2.28
LHX1P48742 SNORD89-201ENST00000390981 114 ntBASIC0.82□□□□□ -2.28
LHX1P48742 RNU7-73P-201ENST00000458743 63 ntBASIC0.82□□□□□ -2.28
LHX1P48742 U7.7-201ENST00000459276 60 ntBASIC0.82□□□□□ -2.28
LHX1P48742 RNU6-197P-201ENST00000516680 100 ntBASIC0.82□□□□□ -2.28
LHX1P48742 AC011921.3-201ENST00000605540 361 ntBASIC0.82□□□□□ -2.28
LHX1P48742 MIR377-201ENST00000362145 69 ntBASIC0.81□□□□□ -2.28
LHX1P48742 RNU6-1189P-201ENST00000383958 107 ntBASIC0.81□□□□□ -2.28
LHX1P48742 Y_RNA.410-201ENST00000383992 113 ntBASIC0.81□□□□□ -2.28
LHX1P48742 RNU6-125P-201ENST00000384505 107 ntBASIC0.81□□□□□ -2.28
LHX1P48742 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.81□□□□□ -2.28
LHX1P48742 AL118496.2-201ENST00000448300 230 ntBASIC0.81□□□□□ -2.28
LHX1P48742 RNU6-1223P-201ENST00000517124 104 ntBASIC0.81□□□□□ -2.28
LHX1P48742 MIR4264-201ENST00000583520 66 ntBASIC0.81□□□□□ -2.28
LHX1P48742 AL136317.1-201ENST00000612653 226 ntBASIC0.81□□□□□ -2.28
LHX1P48742 Y_RNA.477-201ENST00000384352 108 ntBASIC0.8□□□□□ -2.28
LHX1P48742 MIR608-201ENST00000384820 100 ntBASIC0.8□□□□□ -2.28
LHX1P48742 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
LHX1P48742 RNU6-205P-201ENST00000390858 107 ntBASIC0.8□□□□□ -2.28
LHX1P48742 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.8□□□□□ -2.28
LHX1P48742 RNU2-64P-201ENST00000411315 191 ntBASIC0.8□□□□□ -2.28
LHX1P48742 AL035398.1-201ENST00000430869 322 ntBASIC0.8□□□□□ -2.28
LHX1P48742 RNU7-96P-201ENST00000459535 64 ntBASIC0.8□□□□□ -2.28
LHX1P48742 RNU6-561P-201ENST00000516222 102 ntBASIC0.8□□□□□ -2.28
LHX1P48742 Y_RNA.668-201ENST00000516233 93 ntBASIC0.8□□□□□ -2.28
LHX1P48742 RNU6-1110P-201ENST00000516462 101 ntBASIC0.8□□□□□ -2.28
LHX1P48742 7SK.10-201ENST00000621414 298 ntBASIC0.8□□□□□ -2.28
LHX1P48742 Y_RNA.23-201ENST00000362496 106 ntBASIC0.79□□□□□ -2.28
LHX1P48742 Y_RNA.65-201ENST00000362846 100 ntBASIC0.79□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 168.1 ms