Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 SNORD115-14-201ENST00000363090 81 ntBASIC1.41□□□□□ -2.18
TM4SF4P48230 SNORD115-13-201ENST00000363358 82 ntBASIC1.41□□□□□ -2.18
TM4SF4P48230 SNORD115-41-201ENST00000363608 82 ntBASIC1.41□□□□□ -2.18
TM4SF4P48230 SNORD115-11-201ENST00000363616 82 ntBASIC1.41□□□□□ -2.18
TM4SF4P48230 SNORD115-5-201ENST00000363633 82 ntBASIC1.41□□□□□ -2.18
TM4SF4P48230 SNORD115-39-201ENST00000363694 82 ntBASIC1.41□□□□□ -2.18
TM4SF4P48230 SNORD115-4-201ENST00000363810 82 ntBASIC1.41□□□□□ -2.18
TM4SF4P48230 SNORD115-16-201ENST00000363887 82 ntBASIC1.41□□□□□ -2.18
TM4SF4P48230 SNORD115-6-201ENST00000363942 82 ntBASIC1.41□□□□□ -2.18
TM4SF4P48230 SNORD115-42-201ENST00000364273 82 ntBASIC1.41□□□□□ -2.18
TM4SF4P48230 SNORD115-15-201ENST00000364809 81 ntBASIC1.41□□□□□ -2.18
TM4SF4P48230 SNORD115-1-201ENST00000364961 82 ntBASIC1.41□□□□□ -2.18
TM4SF4P48230 SNORD115-26-201ENST00000365067 82 ntBASIC1.41□□□□□ -2.18
TM4SF4P48230 SNORD115-10-201ENST00000365073 81 ntBASIC1.41□□□□□ -2.18
TM4SF4P48230 SNORD115-43-201ENST00000365503 82 ntBASIC1.41□□□□□ -2.18
TM4SF4P48230 SNORD115-36-201ENST00000365629 82 ntBASIC1.41□□□□□ -2.18
TM4SF4P48230 RNU6-484P-201ENST00000384016 107 ntBASIC1.41□□□□□ -2.18
TM4SF4P48230 Y_RNA.552-201ENST00000384665 112 ntBASIC1.41□□□□□ -2.18
TM4SF4P48230 SNORD28B-201ENST00000390993 75 ntBASIC1.41□□□□□ -2.18
TM4SF4P48230 AL591704.2-201ENST00000421658 181 ntBASIC1.41□□□□□ -2.18
TM4SF4P48230 SNORD115-40-201ENST00000606510 82 ntBASIC1.41□□□□□ -2.18
TM4SF4P48230 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.4□□□□□ -2.18
TM4SF4P48230 Y_RNA.91-201ENST00000363042 107 ntBASIC1.4□□□□□ -2.19
TM4SF4P48230 RNU6-1020P-201ENST00000363684 107 ntBASIC1.4□□□□□ -2.19
TM4SF4P48230 Y_RNA.182-201ENST00000363880 111 ntBASIC1.4□□□□□ -2.19
TM4SF4P48230 SNORD61-201ENST00000384252 73 ntBASIC1.4□□□□□ -2.19
TM4SF4P48230 Y_RNA.571-201ENST00000384753 98 ntBASIC1.4□□□□□ -2.19
TM4SF4P48230 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
TM4SF4P48230 SNORD12-201ENST00000391002 90 ntBASIC1.4□□□□□ -2.19
TM4SF4P48230 SNRPGP8-201ENST00000454064 226 ntBASIC1.4□□□□□ -2.19
TM4SF4P48230 RPS29P29-201ENST00000456396 171 ntBASIC1.4□□□□□ -2.19
TM4SF4P48230 AC087343.1-201ENST00000477341 475 ntBASIC1.4□□□□□ -2.19
TM4SF4P48230 AC090821.2-201ENST00000523552 176 ntBASIC1.4□□□□□ -2.19
TM4SF4P48230 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
TM4SF4P48230 MIR5000-201ENST00000577717 103 ntBASIC1.4□□□□□ -2.19
TM4SF4P48230 MIR4295-201ENST00000585286 85 ntBASIC1.4□□□□□ -2.19
TM4SF4P48230 MIR411-201ENST00000362239 96 ntBASIC1.39□□□□□ -2.19
TM4SF4P48230 RNA5SP264-201ENST00000363115 107 ntBASIC1.39□□□□□ -2.19
TM4SF4P48230 MT-TG-201ENST00000387429 68 ntBASIC1.39□□□□□ -2.19
TM4SF4P48230 RNU6-578P-201ENST00000390980 103 ntBASIC1.39□□□□□ -2.19
TM4SF4P48230 RNU7-67P-201ENST00000459003 62 ntBASIC1.39□□□□□ -2.19
TM4SF4P48230 AP003484.1-201ENST00000530974 250 ntBASIC1.39□□□□□ -2.19
TM4SF4P48230 RN7SL793P-201ENST00000583259 296 ntBASIC1.39□□□□□ -2.19
TM4SF4P48230 AC097639.2-201ENST00000603159 172 ntBASIC1.39□□□□□ -2.19
TM4SF4P48230 AP000942.4-201ENST00000604811 241 ntBASIC1.39□□□□□ -2.19
TM4SF4P48230 AC243994.1-201ENST00000618627 109 ntBASIC1.39□□□□□ -2.19
TM4SF4P48230 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
TM4SF4P48230 Y_RNA.37-201ENST00000362606 108 ntBASIC1.38□□□□□ -2.19
TM4SF4P48230 SNORA25.3-201ENST00000363205 127 ntBASIC1.38□□□□□ -2.19
TM4SF4P48230 Y_RNA.410-201ENST00000383992 113 ntBASIC1.38□□□□□ -2.19
TM4SF4P48230 MIR570-201ENST00000384917 97 ntBASIC1.38□□□□□ -2.19
TM4SF4P48230 MIR518F-201ENST00000384973 87 ntBASIC1.38□□□□□ -2.19
TM4SF4P48230 MRPL35P3-201ENST00000421557 364 ntBASIC1.38□□□□□ -2.19
TM4SF4P48230 AC009779.6-201ENST00000603972 165 ntBASIC1.38□□□□□ -2.19
TM4SF4P48230 MIR4791-201ENST00000607666 84 ntBASIC1.38□□□□□ -2.19
TM4SF4P48230 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.38□□□□□ -2.19
TM4SF4P48230 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
TM4SF4P48230 MIR373-201ENST00000362273 69 ntBASIC1.37□□□□□ -2.19
TM4SF4P48230 Y_RNA.330-201ENST00000365230 109 ntBASIC1.37□□□□□ -2.19
TM4SF4P48230 MIR758-201ENST00000390227 88 ntBASIC1.37□□□□□ -2.19
TM4SF4P48230 SNORA40.5-201ENST00000391061 128 ntBASIC1.37□□□□□ -2.19
TM4SF4P48230 RNU4-43P-201ENST00000410628 137 ntBASIC1.37□□□□□ -2.19
TM4SF4P48230 AC063976.4-201ENST00000421971 163 ntBASIC1.37□□□□□ -2.19
TM4SF4P48230 AC108706.1-201ENST00000611053 297 ntBASIC1.37□□□□□ -2.19
TM4SF4P48230 AC141273.2-201ENST00000618989 130 ntBASIC1.37□□□□□ -2.19
TM4SF4P48230 Y_RNA.66-201ENST00000362862 102 ntBASIC1.36□□□□□ -2.19
TM4SF4P48230 RNU6-1189P-201ENST00000383958 107 ntBASIC1.36□□□□□ -2.19
TM4SF4P48230 RNU6-955P-201ENST00000410497 104 ntBASIC1.36□□□□□ -2.19
TM4SF4P48230 RNU7-90P-201ENST00000459216 62 ntBASIC1.36□□□□□ -2.19
TM4SF4P48230 RPS23P4-201ENST00000487908 423 ntBASIC1.36□□□□□ -2.19
TM4SF4P48230 SNORD79.1-201ENST00000516069 84 ntBASIC1.36□□□□□ -2.19
TM4SF4P48230 RNA5SP61-201ENST00000516453 100 ntBASIC1.36□□□□□ -2.19
TM4SF4P48230 SNORD116-25-201ENST00000516517 92 ntBASIC1.36□□□□□ -2.19
TM4SF4P48230 RNU7-53P-201ENST00000516705 60 ntBASIC1.36□□□□□ -2.19
TM4SF4P48230 RNU11-2P-201ENST00000516898 142 ntBASIC1.36□□□□□ -2.19
TM4SF4P48230 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
TM4SF4P48230 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
TM4SF4P48230 SNORA27-201ENST00000384323 126 ntBASIC1.35□□□□□ -2.19
TM4SF4P48230 Y_RNA.542-201ENST00000384641 111 ntBASIC1.35□□□□□ -2.19
TM4SF4P48230 MIR618-201ENST00000385287 98 ntBASIC1.35□□□□□ -2.19
TM4SF4P48230 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.35□□□□□ -2.19
TM4SF4P48230 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.35□□□□□ -2.19
TM4SF4P48230 AC007751.1-201ENST00000529260 376 ntBASIC1.35□□□□□ -2.19
TM4SF4P48230 AC027335.2-201ENST00000624030 375 ntBASIC1.35□□□□□ -2.19
TM4SF4P48230 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
TM4SF4P48230 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.34□□□□□ -2.19
TM4SF4P48230 snoU13.16-201ENST00000459350 104 ntBASIC1.34□□□□□ -2.19
TM4SF4P48230 MIR4308-201ENST00000580634 81 ntBASIC1.34□□□□□ -2.19
TM4SF4P48230 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.33□□□□□ -2.2
TM4SF4P48230 RNU6-275P-201ENST00000364910 107 ntBASIC1.33□□□□□ -2.2
TM4SF4P48230 RNU6-643P-201ENST00000384018 107 ntBASIC1.33□□□□□ -2.2
TM4SF4P48230 MIR548A2-201ENST00000384956 97 ntBASIC1.33□□□□□ -2.2
TM4SF4P48230 RPS29P24-201ENST00000486345 171 ntBASIC1.33□□□□□ -2.2
TM4SF4P48230 RNU6-561P-201ENST00000516222 102 ntBASIC1.33□□□□□ -2.2
TM4SF4P48230 MIR2115-201ENST00000516657 100 ntBASIC1.33□□□□□ -2.2
TM4SF4P48230 PRELID3BP2-201ENST00000605362 201 ntBASIC1.33□□□□□ -2.2
TM4SF4P48230 SEPT14P17-201ENST00000617978 177 ntBASIC1.33□□□□□ -2.2
TM4SF4P48230 AC008163.1-202ENST00000636004 2889 ntBASIC1.32□□□□□ -2.2
TM4SF4P48230 RNU6-379P-201ENST00000363813 104 ntBASIC1.32□□□□□ -2.2
TM4SF4P48230 RNU6-396P-201ENST00000365369 105 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 125 ms