Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 MIR4264-201ENST00000583520 66 ntBASIC0.91□□□□□ -2.26
HADHAP40939 MIR151B-201ENST00000584249 96 ntBASIC0.91□□□□□ -2.26
HADHAP40939 MIR4653-201ENST00000585107 83 ntBASIC0.91□□□□□ -2.26
HADHAP40939 AC097639.2-201ENST00000603159 172 ntBASIC0.91□□□□□ -2.26
HADHAP40939 Y_RNA.410-201ENST00000383992 113 ntBASIC0.9□□□□□ -2.27
HADHAP40939 SNORD61-201ENST00000384252 73 ntBASIC0.9□□□□□ -2.27
HADHAP40939 RNU6-472P-201ENST00000384299 107 ntBASIC0.9□□□□□ -2.27
HADHAP40939 MIR489-201ENST00000384923 84 ntBASIC0.9□□□□□ -2.27
HADHAP40939 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.9□□□□□ -2.27
HADHAP40939 AP003484.1-201ENST00000530974 250 ntBASIC0.9□□□□□ -2.27
HADHAP40939 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
HADHAP40939 MIR373-201ENST00000362273 69 ntBASIC0.89□□□□□ -2.27
HADHAP40939 RNU6-654P-201ENST00000364373 107 ntBASIC0.89□□□□□ -2.27
HADHAP40939 RNU6-580P-201ENST00000365159 107 ntBASIC0.89□□□□□ -2.27
HADHAP40939 RNU6-484P-201ENST00000384016 107 ntBASIC0.89□□□□□ -2.27
HADHAP40939 SNORA27-201ENST00000384323 126 ntBASIC0.89□□□□□ -2.27
HADHAP40939 SNORA2B-201ENST00000384583 137 ntBASIC0.89□□□□□ -2.27
HADHAP40939 MIR548A2-201ENST00000384956 97 ntBASIC0.89□□□□□ -2.27
HADHAP40939 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.89□□□□□ -2.27
HADHAP40939 MIR548H3-201ENST00000408771 118 ntBASIC0.89□□□□□ -2.27
HADHAP40939 MIR548J-201ENST00000408833 112 ntBASIC0.89□□□□□ -2.27
HADHAP40939 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.89□□□□□ -2.27
HADHAP40939 ACA64.5-201ENST00000516207 127 ntBASIC0.89□□□□□ -2.27
HADHAP40939 RNU6-197P-201ENST00000516680 100 ntBASIC0.89□□□□□ -2.27
HADHAP40939 AL365265.1-201ENST00000621045 234 ntBASIC0.89□□□□□ -2.27
HADHAP40939 Y_RNA.47-201ENST00000362697 108 ntBASIC0.88□□□□□ -2.27
HADHAP40939 Y_RNA.66-201ENST00000362862 102 ntBASIC0.88□□□□□ -2.27
HADHAP40939 Y_RNA.262-201ENST00000364641 102 ntBASIC0.88□□□□□ -2.27
HADHAP40939 Y_RNA.634-201ENST00000364811 113 ntBASIC0.88□□□□□ -2.27
HADHAP40939 Y_RNA.459-201ENST00000384251 102 ntBASIC0.88□□□□□ -2.27
HADHAP40939 MIR613-201ENST00000385248 95 ntBASIC0.88□□□□□ -2.27
HADHAP40939 RPS29P24-201ENST00000486345 171 ntBASIC0.88□□□□□ -2.27
HADHAP40939 AC113410.1-201ENST00000505029 247 ntBASIC0.88□□□□□ -2.27
HADHAP40939 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.88□□□□□ -2.27
HADHAP40939 RNU6-103P-201ENST00000363686 107 ntBASIC0.87□□□□□ -2.27
HADHAP40939 Y_RNA.288-201ENST00000364854 92 ntBASIC0.87□□□□□ -2.27
HADHAP40939 RNU4-17P-201ENST00000365598 141 ntBASIC0.87□□□□□ -2.27
HADHAP40939 Y_RNA.466-201ENST00000384294 113 ntBASIC0.87□□□□□ -2.27
HADHAP40939 Y_RNA.572-201ENST00000384757 98 ntBASIC0.87□□□□□ -2.27
HADHAP40939 AL606845.1-201ENST00000404881 255 ntBASIC0.87□□□□□ -2.27
HADHAP40939 SNORA79-201ENST00000408376 140 ntBASIC0.87□□□□□ -2.27
HADHAP40939 RNU6-938P-201ENST00000411285 103 ntBASIC0.87□□□□□ -2.27
HADHAP40939 AL358176.2-201ENST00000425769 204 ntBASIC0.87□□□□□ -2.27
HADHAP40939 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.87□□□□□ -2.27
HADHAP40939 RNU7-96P-201ENST00000459535 64 ntBASIC0.87□□□□□ -2.27
HADHAP40939 PSMC1P5-201ENST00000512850 177 ntBASIC0.87□□□□□ -2.27
HADHAP40939 SNORA18.4-201ENST00000516440 124 ntBASIC0.87□□□□□ -2.27
HADHAP40939 MIR4698-201ENST00000577795 80 ntBASIC0.87□□□□□ -2.27
HADHAP40939 AC022709.1-201ENST00000615967 87 ntBASIC0.87□□□□□ -2.27
HADHAP40939 SNORD114-2-201ENST00000363953 78 ntBASIC0.86□□□□□ -2.27
HADHAP40939 SNORD89-201ENST00000390981 114 ntBASIC0.86□□□□□ -2.27
HADHAP40939 MIR1302-3-201ENST00000408128 138 ntBASIC0.86□□□□□ -2.27
HADHAP40939 MIR1827-201ENST00000408549 66 ntBASIC0.86□□□□□ -2.27
HADHAP40939 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.86□□□□□ -2.27
HADHAP40939 RNU6-351P-201ENST00000516097 100 ntBASIC0.86□□□□□ -2.27
HADHAP40939 MIR4719-201ENST00000585233 84 ntBASIC0.86□□□□□ -2.27
HADHAP40939 AC013244.2-201ENST00000603396 103 ntBASIC0.86□□□□□ -2.27
HADHAP40939 AL353765.1-201ENST00000605514 183 ntBASIC0.86□□□□□ -2.27
HADHAP40939 RNU6-94P-201ENST00000607728 107 ntBASIC0.86□□□□□ -2.27
HADHAP40939 AL442067.1-201ENST00000613261 223 ntBASIC0.86□□□□□ -2.27
HADHAP40939 HSBP1P2-201ENST00000299671 229 ntBASIC0.85□□□□□ -2.27
HADHAP40939 MIR1-1-201ENST00000362147 71 ntBASIC0.85□□□□□ -2.27
HADHAP40939 Y_RNA.354-201ENST00000365448 111 ntBASIC0.85□□□□□ -2.27
HADHAP40939 RNU6-110P-201ENST00000384508 104 ntBASIC0.85□□□□□ -2.27
HADHAP40939 RNU6-381P-201ENST00000391259 108 ntBASIC0.85□□□□□ -2.27
HADHAP40939 RNU6-651P-201ENST00000411040 105 ntBASIC0.85□□□□□ -2.27
HADHAP40939 AL035398.1-201ENST00000430869 322 ntBASIC0.85□□□□□ -2.27
HADHAP40939 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.85□□□□□ -2.27
HADHAP40939 SNRPGP8-201ENST00000454064 226 ntBASIC0.85□□□□□ -2.27
HADHAP40939 RNU6-958P-201ENST00000516995 106 ntBASIC0.85□□□□□ -2.27
HADHAP40939 RNU6-1270P-201ENST00000517128 108 ntBASIC0.85□□□□□ -2.27
HADHAP40939 AC012433.1-201ENST00000588916 398 ntBASIC0.85□□□□□ -2.27
HADHAP40939 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.85□□□□□ -2.27
HADHAP40939 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.84□□□□□ -2.27
HADHAP40939 RNU6-653P-201ENST00000363074 106 ntBASIC0.84□□□□□ -2.27
HADHAP40939 Y_RNA.199-201ENST00000364014 102 ntBASIC0.84□□□□□ -2.27
HADHAP40939 RNY1-201ENST00000364228 113 ntBASIC0.84□□□□□ -2.27
HADHAP40939 snoU2_19.4-201ENST00000364329 80 ntBASIC0.84□□□□□ -2.27
HADHAP40939 RNU6-728P-201ENST00000365375 104 ntBASIC0.84□□□□□ -2.27
HADHAP40939 Y_RNA.396-201ENST00000383949 103 ntBASIC0.84□□□□□ -2.27
HADHAP40939 RNU6-1189P-201ENST00000383958 107 ntBASIC0.84□□□□□ -2.27
HADHAP40939 Y_RNA.494-201ENST00000384432 111 ntBASIC0.84□□□□□ -2.27
HADHAP40939 Y_RNA.542-201ENST00000384641 111 ntBASIC0.84□□□□□ -2.27
HADHAP40939 MIR146A-201ENST00000385201 99 ntBASIC0.84□□□□□ -2.27
HADHAP40939 AC006461.1-201ENST00000412637 326 ntBASIC0.84□□□□□ -2.27
HADHAP40939 FAM71BP1-201ENST00000604431 523 ntBASIC0.84□□□□□ -2.27
HADHAP40939 MIR6515-201ENST00000619843 57 ntBASIC0.84□□□□□ -2.27
HADHAP40939 Z97988.1-201ENST00000637697 135 ntBASIC0.84□□□□□ -2.27
HADHAP40939 SNORD45.3-201ENST00000363836 72 ntBASIC0.83□□□□□ -2.28
HADHAP40939 SNORD38B-201ENST00000384690 67 ntBASIC0.83□□□□□ -2.28
HADHAP40939 MT-TT-201ENST00000387460 66 ntBASIC0.83□□□□□ -2.28
HADHAP40939 RNU4-43P-201ENST00000410628 137 ntBASIC0.83□□□□□ -2.28
HADHAP40939 SNORD127-201ENST00000458892 86 ntBASIC0.83□□□□□ -2.28
HADHAP40939 MIR3973-201ENST00000579824 107 ntBASIC0.83□□□□□ -2.28
HADHAP40939 SNORD38B-202ENST00000625943 69 ntBASIC0.83□□□□□ -2.28
HADHAP40939 Y_RNA.91-201ENST00000363042 107 ntBASIC0.82□□□□□ -2.28
HADHAP40939 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
HADHAP40939 RNU6-125P-201ENST00000384505 107 ntBASIC0.82□□□□□ -2.28
HADHAP40939 Y_RNA.562-201ENST00000384695 113 ntBASIC0.82□□□□□ -2.28
HADHAP40939 MIR100-201ENST00000385259 80 ntBASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms