Protein–RNA interactions for Protein: P12111

COL6A3, Collagen alpha-3(VI) chain, humanhuman

Predictions only

Length 3,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3P12111 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC-0.8□□□□□ -2.54
COL6A3P12111 AC087752.4-201ENST00000605911 462 ntBASIC-0.8□□□□□ -2.54
COL6A3P12111 Y_RNA.75-201ENST00000362927 97 ntBASIC-0.81□□□□□ -2.54
COL6A3P12111 SNORD116-9-201ENST00000384000 95 ntBASIC-0.81□□□□□ -2.54
COL6A3P12111 SNORD116-3-201ENST00000384287 95 ntBASIC-0.81□□□□□ -2.54
COL6A3P12111 SNORD116-8-201ENST00000384365 95 ntBASIC-0.81□□□□□ -2.54
COL6A3P12111 SNORD116-7-201ENST00000384404 95 ntBASIC-0.81□□□□□ -2.54
COL6A3P12111 SNORD116-5-201ENST00000384462 95 ntBASIC-0.81□□□□□ -2.54
COL6A3P12111 AC097635.1-201ENST00000450678 155 ntBASIC-0.81□□□□□ -2.54
COL6A3P12111 AC092807.2-201ENST00000609367 243 ntBASIC-0.81□□□□□ -2.54
COL6A3P12111 AC093783.1-201ENST00000612976 329 ntBASIC-0.81□□□□□ -2.54
COL6A3P12111 AC079248.2-201ENST00000623779 326 ntBASIC-0.81□□□□□ -2.54
COL6A3P12111 AC007494.3-201ENST00000624660 743 ntBASIC-0.81□□□□□ -2.54
COL6A3P12111 SNORA2.1-201ENST00000363089 137 ntBASIC-0.81□□□□□ -2.54
COL6A3P12111 SNORD56.2-201ENST00000363242 71 ntBASIC-0.81□□□□□ -2.54
COL6A3P12111 RNU6-704P-201ENST00000364162 103 ntBASIC-0.81□□□□□ -2.54
COL6A3P12111 Y_RNA.461-201ENST00000384263 103 ntBASIC-0.81□□□□□ -2.54
COL6A3P12111 RNU6-769P-201ENST00000384407 104 ntBASIC-0.81□□□□□ -2.54
COL6A3P12111 MIR450B-201ENST00000401182 78 ntBASIC-0.81□□□□□ -2.54
COL6A3P12111 AC093423.1-201ENST00000440817 142 ntBASIC-0.81□□□□□ -2.54
COL6A3P12111 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC-0.81□□□□□ -2.54
COL6A3P12111 MIR4307-201ENST00000582802 84 ntBASIC-0.81□□□□□ -2.54
COL6A3P12111 PIGPP4-201ENST00000584447 307 ntBASIC-0.81□□□□□ -2.54
COL6A3P12111 AC080013.3-201ENST00000606839 578 ntBASIC-0.81□□□□□ -2.54
COL6A3P12111 AC027807.2-201ENST00000616099 408 ntBASIC-0.81□□□□□ -2.54
COL6A3P12111 RNU6-1260P-201ENST00000362944 107 ntBASIC-0.82□□□□□ -2.54
COL6A3P12111 RNU6-715P-201ENST00000365204 103 ntBASIC-0.82□□□□□ -2.54
COL6A3P12111 RNU6-723P-201ENST00000383973 107 ntBASIC-0.82□□□□□ -2.54
COL6A3P12111 Y_RNA.513-201ENST00000384522 100 ntBASIC-0.82□□□□□ -2.54
COL6A3P12111 RNU4-70P-201ENST00000384579 139 ntBASIC-0.82□□□□□ -2.54
COL6A3P12111 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC-0.82□□□□□ -2.54
COL6A3P12111 RNU7-96P-201ENST00000459535 64 ntBASIC-0.82□□□□□ -2.54
COL6A3P12111 RNU7-25P-201ENST00000516544 62 ntBASIC-0.82□□□□□ -2.54
COL6A3P12111 MTND4LP25-201ENST00000570218 163 ntBASIC-0.82□□□□□ -2.54
COL6A3P12111 AC022441.3-201ENST00000605737 136 ntBASIC-0.82□□□□□ -2.54
COL6A3P12111 AC145423.2-201ENST00000610631 239 ntBASIC-0.82□□□□□ -2.54
COL6A3P12111 RNU6-462P-201ENST00000362659 105 ntBASIC-0.82□□□□□ -2.54
COL6A3P12111 RNU4-80P-201ENST00000363200 141 ntBASIC-0.82□□□□□ -2.54
COL6A3P12111 Y_RNA.366-201ENST00000365540 102 ntBASIC-0.82□□□□□ -2.54
COL6A3P12111 RNU6-597P-201ENST00000365620 102 ntBASIC-0.82□□□□□ -2.54
COL6A3P12111 Y_RNA.481-201ENST00000384373 102 ntBASIC-0.82□□□□□ -2.54
COL6A3P12111 RNU6-298P-201ENST00000390888 96 ntBASIC-0.82□□□□□ -2.54
COL6A3P12111 RNU6-903P-201ENST00000391270 109 ntBASIC-0.82□□□□□ -2.54
COL6A3P12111 MRPL42P2-201ENST00000403169 426 ntBASIC-0.82□□□□□ -2.54
COL6A3P12111 AL354751.2-201ENST00000415471 210 ntBASIC-0.82□□□□□ -2.54
COL6A3P12111 ELOCP4-201ENST00000420090 333 ntBASIC-0.82□□□□□ -2.54
COL6A3P12111 AC104576.1-201ENST00000524225 88 ntBASIC-0.82□□□□□ -2.54
COL6A3P12111 AC245297.2-201ENST00000610119 565 ntBASIC-0.82□□□□□ -2.54
COL6A3P12111 PART1_1.1-201ENST00000611761 217 ntBASIC-0.82□□□□□ -2.54
COL6A3P12111 U4.1-201ENST00000620349 87 ntBASIC-0.82□□□□□ -2.54
COL6A3P12111 Y_RNA.243-201ENST00000364481 109 ntBASIC-0.82□□□□□ -2.54
COL6A3P12111 Y_RNA.399-201ENST00000383955 105 ntBASIC-0.82□□□□□ -2.54
COL6A3P12111 RNU6-571P-201ENST00000384128 107 ntBASIC-0.82□□□□□ -2.54
COL6A3P12111 RNU6-913P-201ENST00000390913 95 ntBASIC-0.82□□□□□ -2.54
COL6A3P12111 SNORA26.6-201ENST00000391256 115 ntBASIC-0.82□□□□□ -2.54
COL6A3P12111 MTCYBP8-201ENST00000422855 651 ntBASIC-0.82□□□□□ -2.54
COL6A3P12111 RNU6-436P-201ENST00000516171 114 ntBASIC-0.82□□□□□ -2.54
COL6A3P12111 MTCO3P23-201ENST00000561363 289 ntBASIC-0.82□□□□□ -2.54
COL6A3P12111 MIR4460-201ENST00000577862 86 ntBASIC-0.82□□□□□ -2.54
COL6A3P12111 SNORD114-7-201ENST00000362520 77 ntBASIC-0.83□□□□□ -2.54
COL6A3P12111 RNU6-1125P-201ENST00000363601 107 ntBASIC-0.83□□□□□ -2.54
COL6A3P12111 SNORD114-4-201ENST00000363962 75 ntBASIC-0.83□□□□□ -2.54
COL6A3P12111 Y_RNA.192-201ENST00000363977 102 ntBASIC-0.83□□□□□ -2.54
COL6A3P12111 Y_RNA.229-201ENST00000364347 113 ntBASIC-0.83□□□□□ -2.54
COL6A3P12111 SNORD115-27-201ENST00000364430 82 ntBASIC-0.83□□□□□ -2.54
COL6A3P12111 SNORD74.6-201ENST00000364796 70 ntBASIC-0.83□□□□□ -2.54
COL6A3P12111 MIR539-201ENST00000365690 78 ntBASIC-0.83□□□□□ -2.54
COL6A3P12111 SNORD72-201ENST00000390994 80 ntBASIC-0.83□□□□□ -2.54
COL6A3P12111 AL606845.1-201ENST00000404881 255 ntBASIC-0.83□□□□□ -2.54
COL6A3P12111 MIR548I2-201ENST00000408348 149 ntBASIC-0.83□□□□□ -2.54
COL6A3P12111 USP9YP30-201ENST00000430729 455 ntBASIC-0.83□□□□□ -2.54
COL6A3P12111 AC104072.1-201ENST00000568817 668 ntBASIC-0.83□□□□□ -2.54
COL6A3P12111 AC245884.10-201ENST00000597355 337 ntBASIC-0.83□□□□□ -2.54
COL6A3P12111 RNA5SP403-201ENST00000363598 108 ntBASIC-0.83□□□□□ -2.54
COL6A3P12111 AL365203.2-201ENST00000423444 196 ntBASIC-0.83□□□□□ -2.54
COL6A3P12111 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-0.83□□□□□ -2.54
COL6A3P12111 MTND2P3-201ENST00000452458 470 ntBASIC-0.83□□□□□ -2.54
COL6A3P12111 TRAJ51-201ENST00000504127 63 ntBASIC-0.83□□□□□ -2.54
COL6A3P12111 RNU7-175P-201ENST00000515915 61 ntBASIC-0.83□□□□□ -2.54
COL6A3P12111 RNU7-149P-201ENST00000516739 59 ntBASIC-0.83□□□□□ -2.54
COL6A3P12111 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC-0.83□□□□□ -2.54
COL6A3P12111 AC008507.2-201ENST00000588402 1176 ntBASIC-0.83□□□□□ -2.54
COL6A3P12111 MIR8084-201ENST00000614105 89 ntBASIC-0.83□□□□□ -2.54
COL6A3P12111 U6.109-201ENST00000636749 87 ntBASIC-0.83□□□□□ -2.54
COL6A3P12111 Y_RNA.331-201ENST00000365267 102 ntBASIC-0.84□□□□□ -2.54
COL6A3P12111 Y_RNA.351-201ENST00000365436 96 ntBASIC-0.84□□□□□ -2.54
COL6A3P12111 SNORD73A-201ENST00000386062 65 ntBASIC-0.84□□□□□ -2.54
COL6A3P12111 Z82188.1-201ENST00000436709 154 ntBASIC-0.84□□□□□ -2.54
COL6A3P12111 AC091179.3-201ENST00000474761 144 ntBASIC-0.84□□□□□ -2.54
COL6A3P12111 RNU6-201P-201ENST00000517100 61 ntBASIC-0.84□□□□□ -2.54
COL6A3P12111 RNU6-1057P-201ENST00000517162 102 ntBASIC-0.84□□□□□ -2.54
COL6A3P12111 AC091144.1-201ENST00000519573 138 ntBASIC-0.84□□□□□ -2.54
COL6A3P12111 MIR4308-201ENST00000580634 81 ntBASIC-0.84□□□□□ -2.54
COL6A3P12111 AL158209.2-201ENST00000619266 216 ntBASIC-0.84□□□□□ -2.54
COL6A3P12111 RNU6-236P-201ENST00000363886 106 ntBASIC-0.84□□□□□ -2.54
COL6A3P12111 RNU6-164P-201ENST00000364604 103 ntBASIC-0.84□□□□□ -2.54
COL6A3P12111 Y_RNA.340-201ENST00000365330 92 ntBASIC-0.84□□□□□ -2.54
COL6A3P12111 RNU6-466P-201ENST00000391224 103 ntBASIC-0.84□□□□□ -2.54
COL6A3P12111 MIR1278-201ENST00000408753 81 ntBASIC-0.84□□□□□ -2.54
COL6A3P12111 MTCO2P29-201ENST00000465212 189 ntBASIC-0.84□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms