Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 RNU6-504P-201ENST00000516568 104 ntBASIC0.48□□□□□ -2.33
APOA4P06727 Y_RNA.711-201ENST00000516993 102 ntBASIC0.48□□□□□ -2.33
APOA4P06727 AP003733.2-201ENST00000529409 171 ntBASIC0.48□□□□□ -2.33
APOA4P06727 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.47□□□□□ -2.33
APOA4P06727 AC010332.2-201ENST00000613083 1904 ntBASIC0.47□□□□□ -2.33
APOA4P06727 Y_RNA.16-201ENST00000362421 102 ntBASIC0.47□□□□□ -2.33
APOA4P06727 Y_RNA.26-201ENST00000362539 101 ntBASIC0.47□□□□□ -2.33
APOA4P06727 Y_RNA.152-201ENST00000363578 100 ntBASIC0.47□□□□□ -2.33
APOA4P06727 RNA5SP499-201ENST00000363982 119 ntBASIC0.47□□□□□ -2.33
APOA4P06727 SNORA8.3-201ENST00000384679 139 ntBASIC0.47□□□□□ -2.33
APOA4P06727 MIR938-201ENST00000401216 83 ntBASIC0.47□□□□□ -2.33
APOA4P06727 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.47□□□□□ -2.33
APOA4P06727 AC114737.2-201ENST00000421583 173 ntBASIC0.47□□□□□ -2.33
APOA4P06727 AC092628.1-201ENST00000436250 252 ntBASIC0.47□□□□□ -2.33
APOA4P06727 SNORD36C-201ENST00000516733 66 ntBASIC0.47□□□□□ -2.33
APOA4P06727 RNU6-1270P-201ENST00000517128 108 ntBASIC0.47□□□□□ -2.33
APOA4P06727 MIR6734-201ENST00000621166 68 ntBASIC0.47□□□□□ -2.33
APOA4P06727 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.46□□□□□ -2.34
APOA4P06727 SNORA1.1-201ENST00000364671 133 ntBASIC0.46□□□□□ -2.34
APOA4P06727 Y_RNA.527-201ENST00000384573 102 ntBASIC0.46□□□□□ -2.34
APOA4P06727 SNORA26-201ENST00000391286 122 ntBASIC0.46□□□□□ -2.34
APOA4P06727 MIR548P-201ENST00000408336 84 ntBASIC0.46□□□□□ -2.34
APOA4P06727 HMGN1P33-201ENST00000432945 451 ntBASIC0.46□□□□□ -2.34
APOA4P06727 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.46□□□□□ -2.34
APOA4P06727 SERF1AP1-201ENST00000514575 187 ntBASIC0.46□□□□□ -2.34
APOA4P06727 RNU6-229P-201ENST00000516614 102 ntBASIC0.46□□□□□ -2.34
APOA4P06727 AL162730.1-201ENST00000605734 292 ntBASIC0.46□□□□□ -2.34
APOA4P06727 MIR5087-201ENST00000635826 76 ntBASIC0.46□□□□□ -2.34
APOA4P06727 Y_RNA.24-201ENST00000362508 103 ntBASIC0.45□□□□□ -2.34
APOA4P06727 Y_RNA.64-201ENST00000362845 102 ntBASIC0.45□□□□□ -2.34
APOA4P06727 Y_RNA.116-201ENST00000363292 103 ntBASIC0.45□□□□□ -2.34
APOA4P06727 Y_RNA.229-201ENST00000364347 113 ntBASIC0.45□□□□□ -2.34
APOA4P06727 RNU1-133P-201ENST00000364867 167 ntBASIC0.45□□□□□ -2.34
APOA4P06727 RNU6-211P-201ENST00000384047 107 ntBASIC0.45□□□□□ -2.34
APOA4P06727 RNU6-42P-201ENST00000384165 107 ntBASIC0.45□□□□□ -2.34
APOA4P06727 RNU6-342P-201ENST00000384521 104 ntBASIC0.45□□□□□ -2.34
APOA4P06727 MIR588-201ENST00000384900 83 ntBASIC0.45□□□□□ -2.34
APOA4P06727 RNU6-1165P-201ENST00000410119 107 ntBASIC0.45□□□□□ -2.34
APOA4P06727 RNU6-602P-201ENST00000411155 105 ntBASIC0.45□□□□□ -2.34
APOA4P06727 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.45□□□□□ -2.34
APOA4P06727 snoU13.2-201ENST00000459201 104 ntBASIC0.45□□□□□ -2.34
APOA4P06727 RNU7-96P-201ENST00000459535 64 ntBASIC0.45□□□□□ -2.34
APOA4P06727 SNORA68.3-201ENST00000515906 83 ntBASIC0.45□□□□□ -2.34
APOA4P06727 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC0.45□□□□□ -2.34
APOA4P06727 MIR6513-201ENST00000621188 64 ntBASIC0.45□□□□□ -2.34
APOA4P06727 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.45□□□□□ -2.34
APOA4P06727 Y_RNA.66-201ENST00000362862 102 ntBASIC0.44□□□□□ -2.34
APOA4P06727 Y_RNA.84-201ENST00000363011 104 ntBASIC0.44□□□□□ -2.34
APOA4P06727 MIR626-201ENST00000385032 94 ntBASIC0.44□□□□□ -2.34
APOA4P06727 RNU2-55P-201ENST00000411146 174 ntBASIC0.44□□□□□ -2.34
APOA4P06727 MIR4680-201ENST00000580906 66 ntBASIC0.44□□□□□ -2.34
APOA4P06727 Y_RNA.138-201ENST00000363462 102 ntBASIC0.43□□□□□ -2.34
APOA4P06727 Y_RNA.410-201ENST00000383992 113 ntBASIC0.43□□□□□ -2.34
APOA4P06727 Y_RNA.535-201ENST00000384612 99 ntBASIC0.43□□□□□ -2.34
APOA4P06727 Y_RNA.572-201ENST00000384757 98 ntBASIC0.43□□□□□ -2.34
APOA4P06727 MIR125B2-201ENST00000385128 89 ntBASIC0.43□□□□□ -2.34
APOA4P06727 MIR518E-201ENST00000385252 88 ntBASIC0.43□□□□□ -2.34
APOA4P06727 SNORD77.3-201ENST00000391113 65 ntBASIC0.43□□□□□ -2.34
APOA4P06727 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.43□□□□□ -2.34
APOA4P06727 AC098934.3-201ENST00000430450 190 ntBASIC0.43□□□□□ -2.34
APOA4P06727 AF228730.3-201ENST00000436691 102 ntBASIC0.43□□□□□ -2.34
APOA4P06727 RNU6-998P-201ENST00000515894 101 ntBASIC0.43□□□□□ -2.34
APOA4P06727 RNU6-1299P-201ENST00000516316 100 ntBASIC0.43□□□□□ -2.34
APOA4P06727 RNU6-1338P-201ENST00000516328 91 ntBASIC0.43□□□□□ -2.34
APOA4P06727 SNORA4-201ENST00000584302 138 ntBASIC0.43□□□□□ -2.34
APOA4P06727 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC0.43□□□□□ -2.34
APOA4P06727 Y_RNA.275-201ENST00000364726 110 ntBASIC0.42□□□□□ -2.34
APOA4P06727 MIR548I3-201ENST00000408378 149 ntBASIC0.42□□□□□ -2.34
APOA4P06727 RNU2-11P-201ENST00000459191 187 ntBASIC0.42□□□□□ -2.34
APOA4P06727 RNU7-185P-201ENST00000459215 60 ntBASIC0.42□□□□□ -2.34
APOA4P06727 AC090897.1-201ENST00000580909 226 ntBASIC0.42□□□□□ -2.34
APOA4P06727 MIRLET7D-201ENST00000362263 87 ntBASIC0.41□□□□□ -2.34
APOA4P06727 RNU6-1309P-201ENST00000363305 108 ntBASIC0.41□□□□□ -2.34
APOA4P06727 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.41□□□□□ -2.34
APOA4P06727 RNU6-484P-201ENST00000384016 107 ntBASIC0.41□□□□□ -2.34
APOA4P06727 SNORA50A-201ENST00000384225 134 ntBASIC0.41□□□□□ -2.34
APOA4P06727 RNU6-364P-201ENST00000384387 107 ntBASIC0.41□□□□□ -2.34
APOA4P06727 RNU6-1289P-201ENST00000384431 106 ntBASIC0.41□□□□□ -2.34
APOA4P06727 MIR563-201ENST00000385080 79 ntBASIC0.41□□□□□ -2.34
APOA4P06727 RNU6-1319P-201ENST00000390855 104 ntBASIC0.41□□□□□ -2.34
APOA4P06727 RNU6-747P-201ENST00000390928 104 ntBASIC0.41□□□□□ -2.34
APOA4P06727 RNU6-241P-201ENST00000391148 104 ntBASIC0.41□□□□□ -2.34
APOA4P06727 MIR1257-201ENST00000408490 117 ntBASIC0.41□□□□□ -2.34
APOA4P06727 SNORD100-201ENST00000408573 76 ntBASIC0.41□□□□□ -2.34
APOA4P06727 RNU6-447P-201ENST00000410293 104 ntBASIC0.41□□□□□ -2.34
APOA4P06727 RNU6-1118P-201ENST00000410382 104 ntBASIC0.41□□□□□ -2.34
APOA4P06727 RNU6-1076P-201ENST00000410397 104 ntBASIC0.41□□□□□ -2.34
APOA4P06727 RNU6-355P-201ENST00000410427 104 ntBASIC0.41□□□□□ -2.34
APOA4P06727 RNU6-791P-201ENST00000410467 104 ntBASIC0.41□□□□□ -2.34
APOA4P06727 RNU6-705P-201ENST00000410601 104 ntBASIC0.41□□□□□ -2.34
APOA4P06727 RNU6-1100P-201ENST00000410691 104 ntBASIC0.41□□□□□ -2.34
APOA4P06727 RNU6-860P-201ENST00000410860 104 ntBASIC0.41□□□□□ -2.34
APOA4P06727 RNU6-1217P-201ENST00000411276 104 ntBASIC0.41□□□□□ -2.34
APOA4P06727 RNU6-785P-201ENST00000411324 104 ntBASIC0.41□□□□□ -2.34
APOA4P06727 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.41□□□□□ -2.34
APOA4P06727 U6.90-201ENST00000614007 104 ntBASIC0.41□□□□□ -2.34
APOA4P06727 U6.70-201ENST00000620287 104 ntBASIC0.41□□□□□ -2.34
APOA4P06727 AC092634.7-201ENST00000621022 103 ntBASIC0.41□□□□□ -2.34
APOA4P06727 AC243829.3-201ENST00000622177 108 ntBASIC0.41□□□□□ -2.34
APOA4P06727 Y_RNA.61-201ENST00000362835 102 ntBASIC0.4□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 213 ms