Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 snoU18.1-201ENST00000629629 71 ntBASIC0.26□□□□□ -2.37
HLA-DPB1P04440 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.25□□□□□ -2.37
HLA-DPB1P04440 MIR103A1-201ENST00000362165 78 ntBASIC0.25□□□□□ -2.37
HLA-DPB1P04440 SNORA25.1-201ENST00000362326 128 ntBASIC0.25□□□□□ -2.37
HLA-DPB1P04440 Y_RNA.16-201ENST00000362421 102 ntBASIC0.25□□□□□ -2.37
HLA-DPB1P04440 Y_RNA.28-201ENST00000362554 111 ntBASIC0.25□□□□□ -2.37
HLA-DPB1P04440 RNU6-1309P-201ENST00000363305 108 ntBASIC0.25□□□□□ -2.37
HLA-DPB1P04440 RNA5SP517-201ENST00000364724 117 ntBASIC0.25□□□□□ -2.37
HLA-DPB1P04440 VTRNA1-3-201ENST00000365645 89 ntBASIC0.25□□□□□ -2.37
HLA-DPB1P04440 SNORD24-201ENST00000383884 75 ntBASIC0.25□□□□□ -2.37
HLA-DPB1P04440 Y_RNA.509-201ENST00000384506 99 ntBASIC0.25□□□□□ -2.37
HLA-DPB1P04440 RNU6-342P-201ENST00000384521 104 ntBASIC0.25□□□□□ -2.37
HLA-DPB1P04440 MIR598-201ENST00000384868 97 ntBASIC0.25□□□□□ -2.37
HLA-DPB1P04440 RNU6-1165P-201ENST00000410119 107 ntBASIC0.25□□□□□ -2.37
HLA-DPB1P04440 RNU6-101P-201ENST00000410323 104 ntBASIC0.25□□□□□ -2.37
HLA-DPB1P04440 RNU7-102P-201ENST00000458948 62 ntBASIC0.25□□□□□ -2.37
HLA-DPB1P04440 Y_RNA.673-201ENST00000516306 88 ntBASIC0.25□□□□□ -2.37
HLA-DPB1P04440 MIR4662B-201ENST00000579498 81 ntBASIC0.25□□□□□ -2.37
HLA-DPB1P04440 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.25□□□□□ -2.37
HLA-DPB1P04440 RNU6-888P-201ENST00000363010 101 ntBASIC0.24□□□□□ -2.37
HLA-DPB1P04440 SNORA63C-201ENST00000364578 129 ntBASIC0.24□□□□□ -2.37
HLA-DPB1P04440 RNU6-326P-201ENST00000365480 107 ntBASIC0.24□□□□□ -2.37
HLA-DPB1P04440 SNORD12C-201ENST00000386307 89 ntBASIC0.24□□□□□ -2.37
HLA-DPB1P04440 MIR526A2-201ENST00000390198 65 ntBASIC0.24□□□□□ -2.37
HLA-DPB1P04440 SNORD100-201ENST00000408573 76 ntBASIC0.24□□□□□ -2.37
HLA-DPB1P04440 AF228730.3-201ENST00000436691 102 ntBASIC0.24□□□□□ -2.37
HLA-DPB1P04440 MIR18B-201ENST00000454574 71 ntBASIC0.24□□□□□ -2.37
HLA-DPB1P04440 snoU13.2-201ENST00000459201 104 ntBASIC0.24□□□□□ -2.37
HLA-DPB1P04440 RNU7-185P-201ENST00000459215 60 ntBASIC0.24□□□□□ -2.37
HLA-DPB1P04440 RNU7-53P-201ENST00000516705 60 ntBASIC0.24□□□□□ -2.37
HLA-DPB1P04440 AC100767.1-201ENST00000528178 123 ntBASIC0.24□□□□□ -2.37
HLA-DPB1P04440 AC090897.1-201ENST00000580909 226 ntBASIC0.24□□□□□ -2.37
HLA-DPB1P04440 AC092634.7-201ENST00000621022 103 ntBASIC0.24□□□□□ -2.37
HLA-DPB1P04440 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.23□□□□□ -2.37
HLA-DPB1P04440 Y_RNA.24-201ENST00000362508 103 ntBASIC0.23□□□□□ -2.37
HLA-DPB1P04440 Y_RNA.66-201ENST00000362862 102 ntBASIC0.23□□□□□ -2.37
HLA-DPB1P04440 RNU6-770P-201ENST00000363929 105 ntBASIC0.23□□□□□ -2.37
HLA-DPB1P04440 Y_RNA.229-201ENST00000364347 113 ntBASIC0.23□□□□□ -2.37
HLA-DPB1P04440 SNORA1.1-201ENST00000364671 133 ntBASIC0.23□□□□□ -2.37
HLA-DPB1P04440 RNU4-45P-201ENST00000365469 141 ntBASIC0.23□□□□□ -2.37
HLA-DPB1P04440 RNU6-514P-201ENST00000384208 107 ntBASIC0.23□□□□□ -2.37
HLA-DPB1P04440 MIR563-201ENST00000385080 79 ntBASIC0.23□□□□□ -2.37
HLA-DPB1P04440 MIR125B2-201ENST00000385128 89 ntBASIC0.23□□□□□ -2.37
HLA-DPB1P04440 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.23□□□□□ -2.37
HLA-DPB1P04440 MTND5P22-201ENST00000458380 195 ntBASIC0.23□□□□□ -2.37
HLA-DPB1P04440 RNY3P15-201ENST00000516297 97 ntBASIC0.23□□□□□ -2.37
HLA-DPB1P04440 SNORA27.4-201ENST00000516650 95 ntBASIC0.23□□□□□ -2.37
HLA-DPB1P04440 SNORA40.15-201ENST00000516884 107 ntBASIC0.23□□□□□ -2.37
HLA-DPB1P04440 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.23□□□□□ -2.37
HLA-DPB1P04440 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC0.23□□□□□ -2.37
HLA-DPB1P04440 MIR30D-201ENST00000362283 70 ntBASIC0.22□□□□□ -2.37
HLA-DPB1P04440 Y_RNA.19-201ENST00000362462 99 ntBASIC0.22□□□□□ -2.37
HLA-DPB1P04440 Y_RNA.64-201ENST00000362845 102 ntBASIC0.22□□□□□ -2.37
HLA-DPB1P04440 Y_RNA.91-201ENST00000363042 107 ntBASIC0.22□□□□□ -2.37
HLA-DPB1P04440 Y_RNA.118-201ENST00000363300 101 ntBASIC0.22□□□□□ -2.37
HLA-DPB1P04440 Y_RNA.210-201ENST00000364161 110 ntBASIC0.22□□□□□ -2.37
HLA-DPB1P04440 RNU6-364P-201ENST00000384387 107 ntBASIC0.22□□□□□ -2.37
HLA-DPB1P04440 SNORA53-201ENST00000391141 249 ntBASIC0.22□□□□□ -2.37
HLA-DPB1P04440 RNU2-11P-201ENST00000459191 187 ntBASIC0.22□□□□□ -2.37
HLA-DPB1P04440 Y_RNA.631-201ENST00000459607 101 ntBASIC0.22□□□□□ -2.37
HLA-DPB1P04440 RNU6-998P-201ENST00000515894 101 ntBASIC0.22□□□□□ -2.37
HLA-DPB1P04440 RNA5SP134-201ENST00000516492 96 ntBASIC0.22□□□□□ -2.37
HLA-DPB1P04440 RNA5SP94-201ENST00000516917 108 ntBASIC0.22□□□□□ -2.37
HLA-DPB1P04440 RNU6-365P-201ENST00000517113 106 ntBASIC0.22□□□□□ -2.37
HLA-DPB1P04440 Y_RNA.721-201ENST00000517207 102 ntBASIC0.22□□□□□ -2.37
HLA-DPB1P04440 AC131281.1-201ENST00000522984 164 ntBASIC0.22□□□□□ -2.37
HLA-DPB1P04440 AC006006.1-201ENST00000603082 144 ntBASIC0.22□□□□□ -2.37
HLA-DPB1P04440 Y_RNA.802-201ENST00000614892 130 ntBASIC0.22□□□□□ -2.37
HLA-DPB1P04440 Y_RNA.7-201ENST00000362352 102 ntBASIC0.21□□□□□ -2.38
HLA-DPB1P04440 SNORA22B-201ENST00000383876 138 ntBASIC0.21□□□□□ -2.38
HLA-DPB1P04440 RNU6-211P-201ENST00000384047 107 ntBASIC0.21□□□□□ -2.38
HLA-DPB1P04440 Y_RNA.431-201ENST00000384086 102 ntBASIC0.21□□□□□ -2.38
HLA-DPB1P04440 Y_RNA.527-201ENST00000384573 102 ntBASIC0.21□□□□□ -2.38
HLA-DPB1P04440 MIR216A-201ENST00000385063 110 ntBASIC0.21□□□□□ -2.38
HLA-DPB1P04440 MIR548I3-201ENST00000408378 149 ntBASIC0.21□□□□□ -2.38
HLA-DPB1P04440 MIR1257-201ENST00000408490 117 ntBASIC0.21□□□□□ -2.38
HLA-DPB1P04440 RNU7-45P-201ENST00000459460 63 ntBASIC0.21□□□□□ -2.38
HLA-DPB1P04440 AC108740.1-201ENST00000498629 225 ntBASIC0.21□□□□□ -2.38
HLA-DPB1P04440 RNU7-156P-201ENST00000517214 74 ntBASIC0.21□□□□□ -2.38
HLA-DPB1P04440 MIR5093-201ENST00000583199 100 ntBASIC0.21□□□□□ -2.38
HLA-DPB1P04440 SNORD92-201ENST00000585078 85 ntBASIC0.21□□□□□ -2.38
HLA-DPB1P04440 SNORA25.18-201ENST00000607153 114 ntBASIC0.21□□□□□ -2.38
HLA-DPB1P04440 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.21□□□□□ -2.38
HLA-DPB1P04440 SNORD44.1-201ENST00000363202 61 ntBASIC0.2□□□□□ -2.38
HLA-DPB1P04440 Y_RNA.138-201ENST00000363462 102 ntBASIC0.2□□□□□ -2.38
HLA-DPB1P04440 SNORD114-23-201ENST00000363536 72 ntBASIC0.2□□□□□ -2.38
HLA-DPB1P04440 Y_RNA.216-201ENST00000364205 93 ntBASIC0.2□□□□□ -2.38
HLA-DPB1P04440 RNU6-484P-201ENST00000384016 107 ntBASIC0.2□□□□□ -2.38
HLA-DPB1P04440 Y_RNA.440-201ENST00000384120 114 ntBASIC0.2□□□□□ -2.38
HLA-DPB1P04440 MIR518A1-201ENST00000385068 85 ntBASIC0.2□□□□□ -2.38
HLA-DPB1P04440 RNU6-1319P-201ENST00000390855 104 ntBASIC0.2□□□□□ -2.38
HLA-DPB1P04440 RNU6-747P-201ENST00000390928 104 ntBASIC0.2□□□□□ -2.38
HLA-DPB1P04440 RNU6-241P-201ENST00000391148 104 ntBASIC0.2□□□□□ -2.38
HLA-DPB1P04440 RNU6-447P-201ENST00000410293 104 ntBASIC0.2□□□□□ -2.38
HLA-DPB1P04440 RNU6-1118P-201ENST00000410382 104 ntBASIC0.2□□□□□ -2.38
HLA-DPB1P04440 RNU6-1076P-201ENST00000410397 104 ntBASIC0.2□□□□□ -2.38
HLA-DPB1P04440 RNU6-355P-201ENST00000410427 104 ntBASIC0.2□□□□□ -2.38
HLA-DPB1P04440 RNU6-791P-201ENST00000410467 104 ntBASIC0.2□□□□□ -2.38
HLA-DPB1P04440 RNU6-705P-201ENST00000410601 104 ntBASIC0.2□□□□□ -2.38
HLA-DPB1P04440 RNU6-1100P-201ENST00000410691 104 ntBASIC0.2□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 183.1 ms