Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AC131280.1-202ENST00000624067 4211 ntBASIC2.53□□□□□ -2
PDGFAP04085 AC005336.3-201ENST00000623833 2679 ntBASIC2.53□□□□□ -2
PDGFAP04085 Y_RNA.369-201ENST00000365568 117 ntBASIC2.53□□□□□ -2
PDGFAP04085 SNORA70B-201ENST00000384210 135 ntBASIC2.53□□□□□ -2
PDGFAP04085 RNU6-905P-201ENST00000384434 107 ntBASIC2.53□□□□□ -2
PDGFAP04085 MIR590-201ENST00000385008 97 ntBASIC2.53□□□□□ -2
PDGFAP04085 SNORD23.1-201ENST00000408212 104 ntBASIC2.53□□□□□ -2
PDGFAP04085 RNU6-970P-201ENST00000516312 107 ntBASIC2.53□□□□□ -2
PDGFAP04085 RNA5SP33-201ENST00000516687 98 ntBASIC2.53□□□□□ -2
PDGFAP04085 DEFB122-202ENST00000569013 197 ntBASIC2.53□□□□□ -2
PDGFAP04085 MIR3618-201ENST00000580330 88 ntBASIC2.53□□□□□ -2
PDGFAP04085 MIR5194-201ENST00000582634 120 ntBASIC2.53□□□□□ -2
PDGFAP04085 AL513534.2-201ENST00000603836 250 ntBASIC2.53□□□□□ -2
PDGFAP04085 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.53□□□□□ -2
PDGFAP04085 RNU6-203P-201ENST00000384038 104 ntBASIC2.52□□□□□ -2.01
PDGFAP04085 AC004965.1-201ENST00000413033 213 ntBASIC2.52□□□□□ -2.01
PDGFAP04085 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.52□□□□□ -2.01
PDGFAP04085 RNU6-322P-201ENST00000516010 103 ntBASIC2.52□□□□□ -2.01
PDGFAP04085 RNU6-1258P-201ENST00000516911 111 ntBASIC2.52□□□□□ -2.01
PDGFAP04085 FAM71BP1-201ENST00000604431 523 ntBASIC2.52□□□□□ -2.01
PDGFAP04085 MIR203B-201ENST00000636080 86 ntBASIC2.52□□□□□ -2.01
PDGFAP04085 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
PDGFAP04085 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.52□□□□□ -2.01
PDGFAP04085 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
PDGFAP04085 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
PDGFAP04085 RNU6-640P-201ENST00000363693 105 ntBASIC2.51□□□□□ -2.01
PDGFAP04085 RNU4-36P-201ENST00000364294 144 ntBASIC2.51□□□□□ -2.01
PDGFAP04085 SNORA1.1-201ENST00000364671 133 ntBASIC2.51□□□□□ -2.01
PDGFAP04085 RNU6-1190P-201ENST00000410811 104 ntBASIC2.51□□□□□ -2.01
PDGFAP04085 RPS3AP1-201ENST00000413190 320 ntBASIC2.51□□□□□ -2.01
PDGFAP04085 RNU6-904P-201ENST00000516206 101 ntBASIC2.51□□□□□ -2.01
PDGFAP04085 RNU6-917P-201ENST00000516294 104 ntBASIC2.51□□□□□ -2.01
PDGFAP04085 AC008133.2-201ENST00000624540 351 ntBASIC2.51□□□□□ -2.01
PDGFAP04085 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
PDGFAP04085 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
PDGFAP04085 RNU6-363P-201ENST00000362895 105 ntBASIC2.5□□□□□ -2.01
PDGFAP04085 Y_RNA.155-201ENST00000363632 101 ntBASIC2.5□□□□□ -2.01
PDGFAP04085 DEFA7P-201ENST00000382676 285 ntBASIC2.5□□□□□ -2.01
PDGFAP04085 RNA5SP212-201ENST00000391223 107 ntBASIC2.5□□□□□ -2.01
PDGFAP04085 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC2.5□□□□□ -2.01
PDGFAP04085 AC011753.1-201ENST00000451001 220 ntBASIC2.5□□□□□ -2.01
PDGFAP04085 RNA5SP24-201ENST00000516478 95 ntBASIC2.5□□□□□ -2.01
PDGFAP04085 SNORD53-201ENST00000579969 78 ntBASIC2.5□□□□□ -2.01
PDGFAP04085 MIR4764-201ENST00000580680 88 ntBASIC2.5□□□□□ -2.01
PDGFAP04085 AC064859.1-201ENST00000624741 174 ntBASIC2.5□□□□□ -2.01
PDGFAP04085 MIR4679-1-201ENST00000637619 75 ntBASIC2.5□□□□□ -2.01
PDGFAP04085 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
PDGFAP04085 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
PDGFAP04085 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.49□□□□□ -2.01
PDGFAP04085 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
PDGFAP04085 Y_RNA.470-201ENST00000384307 117 ntBASIC2.49□□□□□ -2.01
PDGFAP04085 MIR194-1-201ENST00000384892 85 ntBASIC2.49□□□□□ -2.01
PDGFAP04085 MIR520C-201ENST00000385005 87 ntBASIC2.49□□□□□ -2.01
PDGFAP04085 SNORA3.2-201ENST00000408221 125 ntBASIC2.49□□□□□ -2.01
PDGFAP04085 SNORA19.1-201ENST00000410656 129 ntBASIC2.49□□□□□ -2.01
PDGFAP04085 DEFB131E-201ENST00000532329 154 ntBASIC2.49□□□□□ -2.01
PDGFAP04085 MIR548AE2-201ENST00000583456 67 ntBASIC2.49□□□□□ -2.01
PDGFAP04085 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.49□□□□□ -2.01
PDGFAP04085 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.49□□□□□ -2.01
PDGFAP04085 MIR2052-201ENST00000636055 55 ntBASIC2.49□□□□□ -2.01
PDGFAP04085 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
PDGFAP04085 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.49□□□□□ -2.01
PDGFAP04085 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.49□□□□□ -2.01
PDGFAP04085 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
PDGFAP04085 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.48□□□□□ -2.01
PDGFAP04085 MIR6073-201ENST00000352083 89 ntBASIC2.48□□□□□ -2.01
PDGFAP04085 RNA5SP276-201ENST00000362580 94 ntBASIC2.48□□□□□ -2.01
PDGFAP04085 RNU4-67P-201ENST00000364569 141 ntBASIC2.48□□□□□ -2.01
PDGFAP04085 SNORA67.1-201ENST00000364749 141 ntBASIC2.48□□□□□ -2.01
PDGFAP04085 Y_RNA.354-201ENST00000365448 111 ntBASIC2.48□□□□□ -2.01
PDGFAP04085 RNU6-409P-201ENST00000384114 104 ntBASIC2.48□□□□□ -2.01
PDGFAP04085 RNA5SP181-201ENST00000410246 98 ntBASIC2.48□□□□□ -2.01
PDGFAP04085 RNU6-733P-201ENST00000410759 104 ntBASIC2.48□□□□□ -2.01
PDGFAP04085 AC234781.5-201ENST00000508429 271 ntBASIC2.48□□□□□ -2.01
PDGFAP04085 RNU6-109P-201ENST00000516364 107 ntBASIC2.48□□□□□ -2.01
PDGFAP04085 RNU6-184P-201ENST00000516514 107 ntBASIC2.48□□□□□ -2.01
PDGFAP04085 RNU6-158P-201ENST00000517104 100 ntBASIC2.48□□□□□ -2.01
PDGFAP04085 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.48□□□□□ -2.01
PDGFAP04085 Y_RNA.773-201ENST00000607168 90 ntBASIC2.48□□□□□ -2.01
PDGFAP04085 MIR1255B1-201ENST00000636325 63 ntBASIC2.48□□□□□ -2.01
PDGFAP04085 Y_RNA.10-201ENST00000362371 110 ntBASIC2.47□□□□□ -2.01
PDGFAP04085 MIR512-1-201ENST00000384913 84 ntBASIC2.47□□□□□ -2.01
PDGFAP04085 JTBP1-201ENST00000441314 247 ntBASIC2.47□□□□□ -2.01
PDGFAP04085 SNORA31.11-201ENST00000516528 139 ntBASIC2.47□□□□□ -2.01
PDGFAP04085 RNA5SP402-201ENST00000517148 110 ntBASIC2.47□□□□□ -2.01
PDGFAP04085 MIR7843-201ENST00000622274 79 ntBASIC2.47□□□□□ -2.01
PDGFAP04085 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.46□□□□□ -2.01
PDGFAP04085 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.02
PDGFAP04085 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
PDGFAP04085 RNA5SP289-201ENST00000362332 137 ntBASIC2.46□□□□□ -2.02
PDGFAP04085 MIR653-201ENST00000385279 96 ntBASIC2.46□□□□□ -2.02
PDGFAP04085 AL451046.2-201ENST00000403074 277 ntBASIC2.46□□□□□ -2.02
PDGFAP04085 HMGN1P33-201ENST00000432945 451 ntBASIC2.46□□□□□ -2.02
PDGFAP04085 SNORA72.7-201ENST00000516349 94 ntBASIC2.46□□□□□ -2.02
PDGFAP04085 MIR8055-201ENST00000610739 97 ntBASIC2.46□□□□□ -2.02
PDGFAP04085 Z82195.2-201ENST00000612348 18351 ntBASIC2.46□□□□□ -2.02
PDGFAP04085 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
PDGFAP04085 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.45□□□□□ -2.02
PDGFAP04085 RNY3P2-201ENST00000362918 102 ntBASIC2.45□□□□□ -2.02
PDGFAP04085 U8.2-201ENST00000363156 134 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms