Protein–RNA interactions for Protein: O95786

DDX58, Probable ATP-dependent RNA helicase DDX58, humanhuman

Known RBP Predictions only

Length 925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58O95786 RNU6-94P-201ENST00000607728 107 ntBASIC1□□□□□ -2.25
DDX58O95786 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.99□□□□□ -2.25
DDX58O95786 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.99□□□□□ -2.25
DDX58O95786 SNORD115-34-201ENST00000362441 82 ntBASIC0.99□□□□□ -2.25
DDX58O95786 SNORD115-12-201ENST00000362583 82 ntBASIC0.99□□□□□ -2.25
DDX58O95786 SNORD115-29-201ENST00000362834 82 ntBASIC0.99□□□□□ -2.25
DDX58O95786 SNORD115-9-201ENST00000362912 82 ntBASIC0.99□□□□□ -2.25
DDX58O95786 SNORD115-21-201ENST00000362963 81 ntBASIC0.99□□□□□ -2.25
DDX58O95786 SNORD115-14-201ENST00000363090 81 ntBASIC0.99□□□□□ -2.25
DDX58O95786 SNORD115-13-201ENST00000363358 82 ntBASIC0.99□□□□□ -2.25
DDX58O95786 SNORD114-26-201ENST00000363543 72 ntBASIC0.99□□□□□ -2.25
DDX58O95786 SNORD115-41-201ENST00000363608 82 ntBASIC0.99□□□□□ -2.25
DDX58O95786 SNORD115-11-201ENST00000363616 82 ntBASIC0.99□□□□□ -2.25
DDX58O95786 SNORD115-5-201ENST00000363633 82 ntBASIC0.99□□□□□ -2.25
DDX58O95786 SNORD115-39-201ENST00000363694 82 ntBASIC0.99□□□□□ -2.25
DDX58O95786 SNORD115-4-201ENST00000363810 82 ntBASIC0.99□□□□□ -2.25
DDX58O95786 SNORD115-16-201ENST00000363887 82 ntBASIC0.99□□□□□ -2.25
DDX58O95786 SNORD115-6-201ENST00000363942 82 ntBASIC0.99□□□□□ -2.25
DDX58O95786 SNORD115-42-201ENST00000364273 82 ntBASIC0.99□□□□□ -2.25
DDX58O95786 SNORD113.3-201ENST00000364630 78 ntBASIC0.99□□□□□ -2.25
DDX58O95786 SNORD115-15-201ENST00000364809 81 ntBASIC0.99□□□□□ -2.25
DDX58O95786 SNORD115-1-201ENST00000364961 82 ntBASIC0.99□□□□□ -2.25
DDX58O95786 Y_RNA.304-201ENST00000365011 112 ntBASIC0.99□□□□□ -2.25
DDX58O95786 SNORD115-26-201ENST00000365067 82 ntBASIC0.99□□□□□ -2.25
DDX58O95786 SNORD115-10-201ENST00000365073 81 ntBASIC0.99□□□□□ -2.25
DDX58O95786 SNORD115-43-201ENST00000365503 82 ntBASIC0.99□□□□□ -2.25
DDX58O95786 SNORD115-36-201ENST00000365629 82 ntBASIC0.99□□□□□ -2.25
DDX58O95786 SNORD24-201ENST00000383884 75 ntBASIC0.99□□□□□ -2.25
DDX58O95786 Y_RNA.432-201ENST00000384087 111 ntBASIC0.99□□□□□ -2.25
DDX58O95786 Y_RNA.494-201ENST00000384432 111 ntBASIC0.99□□□□□ -2.25
DDX58O95786 RNU2-55P-201ENST00000411146 174 ntBASIC0.99□□□□□ -2.25
DDX58O95786 RNU2-64P-201ENST00000411315 191 ntBASIC0.99□□□□□ -2.25
DDX58O95786 AL358176.2-201ENST00000425769 204 ntBASIC0.99□□□□□ -2.25
DDX58O95786 RPL39P28-201ENST00000465655 155 ntBASIC0.99□□□□□ -2.25
DDX58O95786 RNU6-453P-201ENST00000516819 85 ntBASIC0.99□□□□□ -2.25
DDX58O95786 AP003484.1-201ENST00000530974 250 ntBASIC0.99□□□□□ -2.25
DDX58O95786 SNORD115-40-201ENST00000606510 82 ntBASIC0.99□□□□□ -2.25
DDX58O95786 AL020996.3-201ENST00000606617 222 ntBASIC0.99□□□□□ -2.25
DDX58O95786 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.99□□□□□ -2.25
DDX58O95786 Y_RNA.37-201ENST00000362606 108 ntBASIC0.98□□□□□ -2.25
DDX58O95786 snoU2_19.4-201ENST00000364329 80 ntBASIC0.98□□□□□ -2.25
DDX58O95786 RNY3P5-201ENST00000384127 102 ntBASIC0.98□□□□□ -2.25
DDX58O95786 MIR616-201ENST00000385293 97 ntBASIC0.98□□□□□ -2.25
DDX58O95786 SNORD89-201ENST00000390981 114 ntBASIC0.98□□□□□ -2.25
DDX58O95786 SNORD111-201ENST00000408139 94 ntBASIC0.98□□□□□ -2.25
DDX58O95786 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.98□□□□□ -2.25
DDX58O95786 SNRPGP8-201ENST00000454064 226 ntBASIC0.98□□□□□ -2.25
DDX58O95786 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.98□□□□□ -2.25
DDX58O95786 RNU2-13P-201ENST00000515909 113 ntBASIC0.98□□□□□ -2.25
DDX58O95786 AC036111.3-201ENST00000526389 112 ntBASIC0.98□□□□□ -2.25
DDX58O95786 AC106800.4-201ENST00000614905 153 ntBASIC0.98□□□□□ -2.25
DDX58O95786 AC134878.1-201ENST00000619901 243 ntBASIC0.98□□□□□ -2.25
DDX58O95786 MIR6866-201ENST00000638146 69 ntBASIC0.98□□□□□ -2.25
DDX58O95786 Y_RNA.36-201ENST00000362602 112 ntBASIC0.97□□□□□ -2.25
DDX58O95786 Y_RNA.262-201ENST00000364641 102 ntBASIC0.97□□□□□ -2.25
DDX58O95786 MIR518F-201ENST00000384973 87 ntBASIC0.97□□□□□ -2.25
DDX58O95786 SNORD127-201ENST00000458892 86 ntBASIC0.97□□□□□ -2.25
DDX58O95786 RNA5SP255-201ENST00000516370 107 ntBASIC0.97□□□□□ -2.25
DDX58O95786 RNU6-197P-201ENST00000516680 100 ntBASIC0.97□□□□□ -2.25
DDX58O95786 MIR4282-201ENST00000583613 67 ntBASIC0.97□□□□□ -2.25
DDX58O95786 AP000753.3-201ENST00000604083 169 ntBASIC0.97□□□□□ -2.25
DDX58O95786 AL136317.1-201ENST00000612653 226 ntBASIC0.97□□□□□ -2.25
DDX58O95786 MIR6779-201ENST00000617283 64 ntBASIC0.97□□□□□ -2.25
DDX58O95786 Y_RNA.91-201ENST00000363042 107 ntBASIC0.96□□□□□ -2.26
DDX58O95786 SNORD27-201ENST00000363981 72 ntBASIC0.96□□□□□ -2.26
DDX58O95786 Y_RNA.634-201ENST00000364811 113 ntBASIC0.96□□□□□ -2.26
DDX58O95786 Y_RNA.556-201ENST00000384677 113 ntBASIC0.96□□□□□ -2.26
DDX58O95786 MIR608-201ENST00000384820 100 ntBASIC0.96□□□□□ -2.26
DDX58O95786 RNU6-1228P-201ENST00000391014 107 ntBASIC0.96□□□□□ -2.26
DDX58O95786 SNORA40.5-201ENST00000391061 128 ntBASIC0.96□□□□□ -2.26
DDX58O95786 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.96□□□□□ -2.26
DDX58O95786 MIR548H3-201ENST00000408771 118 ntBASIC0.96□□□□□ -2.26
DDX58O95786 snoU13.16-201ENST00000459350 104 ntBASIC0.96□□□□□ -2.26
DDX58O95786 PSMC1P5-201ENST00000512850 177 ntBASIC0.96□□□□□ -2.26
DDX58O95786 RNU6-1045P-201ENST00000516321 107 ntBASIC0.96□□□□□ -2.26
DDX58O95786 SCARNA15.1-201ENST00000516384 125 ntBASIC0.96□□□□□ -2.26
DDX58O95786 SNORA18.4-201ENST00000516440 124 ntBASIC0.96□□□□□ -2.26
DDX58O95786 MIR4643-201ENST00000577473 78 ntBASIC0.96□□□□□ -2.26
DDX58O95786 AC025627.3-201ENST00000582078 182 ntBASIC0.96□□□□□ -2.26
DDX58O95786 RNU6-888P-201ENST00000363010 101 ntBASIC0.95□□□□□ -2.26
DDX58O95786 RNU1-133P-201ENST00000364867 167 ntBASIC0.95□□□□□ -2.26
DDX58O95786 Y_RNA.292-201ENST00000364904 97 ntBASIC0.95□□□□□ -2.26
DDX58O95786 RNU4-17P-201ENST00000365598 141 ntBASIC0.95□□□□□ -2.26
DDX58O95786 SNORA27-201ENST00000384323 126 ntBASIC0.95□□□□□ -2.26
DDX58O95786 SNORA79-201ENST00000408376 140 ntBASIC0.95□□□□□ -2.26
DDX58O95786 SNORD36C-201ENST00000516733 66 ntBASIC0.95□□□□□ -2.26
DDX58O95786 AC013244.2-201ENST00000603396 103 ntBASIC0.95□□□□□ -2.26
DDX58O95786 AL442067.1-201ENST00000613261 223 ntBASIC0.95□□□□□ -2.26
DDX58O95786 7SK.10-201ENST00000621414 298 ntBASIC0.95□□□□□ -2.26
DDX58O95786 MIR6835-201ENST00000621552 64 ntBASIC0.95□□□□□ -2.26
DDX58O95786 MIR342-201ENST00000362212 99 ntBASIC0.94□□□□□ -2.26
DDX58O95786 MIR548A2-201ENST00000384956 97 ntBASIC0.94□□□□□ -2.26
DDX58O95786 RNU6-613P-201ENST00000410412 108 ntBASIC0.94□□□□□ -2.26
DDX58O95786 MTCYBP9-201ENST00000431021 303 ntBASIC0.94□□□□□ -2.26
DDX58O95786 AL118496.2-201ENST00000448300 230 ntBASIC0.94□□□□□ -2.26
DDX58O95786 RNU6-1132P-201ENST00000459214 107 ntBASIC0.94□□□□□ -2.26
DDX58O95786 U7.7-201ENST00000459276 60 ntBASIC0.94□□□□□ -2.26
DDX58O95786 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.94□□□□□ -2.26
DDX58O95786 RNA5SP153-201ENST00000516498 76 ntBASIC0.94□□□□□ -2.26
DDX58O95786 AP000942.4-201ENST00000604811 241 ntBASIC0.94□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 281.1 ms