Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 SNORD115-4-201ENST00000363810 82 ntBASIC2.14□□□□□ -2.07
CNOT4O95628 SNORD115-16-201ENST00000363887 82 ntBASIC2.14□□□□□ -2.07
CNOT4O95628 SNORD115-6-201ENST00000363942 82 ntBASIC2.14□□□□□ -2.07
CNOT4O95628 SNORD115-42-201ENST00000364273 82 ntBASIC2.14□□□□□ -2.07
CNOT4O95628 SNORD115-15-201ENST00000364809 81 ntBASIC2.14□□□□□ -2.07
CNOT4O95628 SNORD115-1-201ENST00000364961 82 ntBASIC2.14□□□□□ -2.07
CNOT4O95628 SNORD115-26-201ENST00000365067 82 ntBASIC2.14□□□□□ -2.07
CNOT4O95628 SNORD115-10-201ENST00000365073 81 ntBASIC2.14□□□□□ -2.07
CNOT4O95628 Y_RNA.344-201ENST00000365381 112 ntBASIC2.14□□□□□ -2.07
CNOT4O95628 SNORD115-43-201ENST00000365503 82 ntBASIC2.14□□□□□ -2.07
CNOT4O95628 SNORD115-36-201ENST00000365629 82 ntBASIC2.14□□□□□ -2.07
CNOT4O95628 RNU7-96P-201ENST00000459535 64 ntBASIC2.14□□□□□ -2.07
CNOT4O95628 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.14□□□□□ -2.07
CNOT4O95628 AC079804.2-201ENST00000490376 200 ntBASIC2.14□□□□□ -2.07
CNOT4O95628 RNU6-998P-201ENST00000515894 101 ntBASIC2.14□□□□□ -2.07
CNOT4O95628 RNA5SP168-201ENST00000516642 112 ntBASIC2.14□□□□□ -2.07
CNOT4O95628 DEFB122-202ENST00000569013 197 ntBASIC2.14□□□□□ -2.07
CNOT4O95628 SNORD115-40-201ENST00000606510 82 ntBASIC2.14□□□□□ -2.07
CNOT4O95628 AC103810.6-201ENST00000606708 136 ntBASIC2.14□□□□□ -2.07
CNOT4O95628 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
CNOT4O95628 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.14□□□□□ -2.07
CNOT4O95628 AL442644.1-201ENST00000454390 3105 ntBASIC2.14□□□□□ -2.07
CNOT4O95628 SNORA51.10-201ENST00000384418 136 ntBASIC2.13□□□□□ -2.07
CNOT4O95628 Y_RNA.544-201ENST00000384650 113 ntBASIC2.13□□□□□ -2.07
CNOT4O95628 RN7SKP223-201ENST00000410582 62 ntBASIC2.13□□□□□ -2.07
CNOT4O95628 AC234781.5-201ENST00000508429 271 ntBASIC2.13□□□□□ -2.07
CNOT4O95628 AC067747.1-201ENST00000608026 250 ntBASIC2.13□□□□□ -2.07
CNOT4O95628 AL137847.3-201ENST00000611521 109 ntBASIC2.13□□□□□ -2.07
CNOT4O95628 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.13□□□□□ -2.07
CNOT4O95628 AC080100.1-201ENST00000624239 5356 ntBASIC2.12□□□□□ -2.07
CNOT4O95628 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC2.12□□□□□ -2.07
CNOT4O95628 MIR302B-201ENST00000362188 73 ntBASIC2.12□□□□□ -2.07
CNOT4O95628 SNORA4.2-201ENST00000365313 147 ntBASIC2.12□□□□□ -2.07
CNOT4O95628 MIR1267-201ENST00000408723 78 ntBASIC2.12□□□□□ -2.07
CNOT4O95628 AL356320.1-201ENST00000429616 163 ntBASIC2.12□□□□□ -2.07
CNOT4O95628 RNU7-12P-201ENST00000516030 62 ntBASIC2.12□□□□□ -2.07
CNOT4O95628 SNORA40.13-201ENST00000516379 120 ntBASIC2.12□□□□□ -2.07
CNOT4O95628 RNU7-181P-201ENST00000517234 74 ntBASIC2.12□□□□□ -2.07
CNOT4O95628 AC015712.3-201ENST00000559380 164 ntBASIC2.12□□□□□ -2.07
CNOT4O95628 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.11□□□□□ -2.07
CNOT4O95628 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
CNOT4O95628 Y_RNA.494-201ENST00000384432 111 ntBASIC2.11□□□□□ -2.07
CNOT4O95628 RNU6-1031P-201ENST00000384773 107 ntBASIC2.11□□□□□ -2.07
CNOT4O95628 RNA5SP144-201ENST00000410846 116 ntBASIC2.11□□□□□ -2.07
CNOT4O95628 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.11□□□□□ -2.07
CNOT4O95628 AC108210.2-201ENST00000503681 201 ntBASIC2.11□□□□□ -2.07
CNOT4O95628 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.11□□□□□ -2.07
CNOT4O95628 SNORA44.1-201ENST00000517031 108 ntBASIC2.11□□□□□ -2.07
CNOT4O95628 SUB1P4-201ENST00000566062 339 ntBASIC2.11□□□□□ -2.07
CNOT4O95628 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.11□□□□□ -2.07
CNOT4O95628 MIR5007-201ENST00000583098 95 ntBASIC2.11□□□□□ -2.07
CNOT4O95628 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
CNOT4O95628 Y_RNA.78-201ENST00000362970 110 ntBASIC2.1□□□□□ -2.07
CNOT4O95628 MIR520A-201ENST00000384862 85 ntBASIC2.1□□□□□ -2.07
CNOT4O95628 MIR590-201ENST00000385008 97 ntBASIC2.1□□□□□ -2.07
CNOT4O95628 MIR452-201ENST00000385020 85 ntBASIC2.1□□□□□ -2.07
CNOT4O95628 RNA5SP100-201ENST00000410903 110 ntBASIC2.1□□□□□ -2.07
CNOT4O95628 RNA5SP59-201ENST00000410922 110 ntBASIC2.1□□□□□ -2.07
CNOT4O95628 AL022718.1-201ENST00000412004 84 ntBASIC2.1□□□□□ -2.07
CNOT4O95628 HMGN2P38-201ENST00000423806 265 ntBASIC2.1□□□□□ -2.07
CNOT4O95628 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.1□□□□□ -2.07
CNOT4O95628 AL591806.2-201ENST00000433122 173 ntBASIC2.1□□□□□ -2.07
CNOT4O95628 AC090255.1-201ENST00000495779 349 ntBASIC2.1□□□□□ -2.07
CNOT4O95628 AC026436.1-201ENST00000510537 270 ntBASIC2.1□□□□□ -2.07
CNOT4O95628 SNORA31.4-201ENST00000516049 129 ntBASIC2.1□□□□□ -2.07
CNOT4O95628 RNU7-6P-201ENST00000516845 62 ntBASIC2.1□□□□□ -2.07
CNOT4O95628 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.1□□□□□ -2.07
CNOT4O95628 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.1□□□□□ -2.07
CNOT4O95628 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.1□□□□□ -2.07
CNOT4O95628 AC021613.1-201ENST00000623880 111 ntBASIC2.1□□□□□ -2.07
CNOT4O95628 AL162726.3-218ENST00000636401 95 ntBASIC2.1□□□□□ -2.07
CNOT4O95628 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
CNOT4O95628 SNORA1.2-201ENST00000365189 134 ntBASIC2.09□□□□□ -2.07
CNOT4O95628 MIR516B2-201ENST00000385190 85 ntBASIC2.09□□□□□ -2.07
CNOT4O95628 MIR1289-2-201ENST00000408360 111 ntBASIC2.09□□□□□ -2.07
CNOT4O95628 MIR1912-201ENST00000410389 80 ntBASIC2.09□□□□□ -2.07
CNOT4O95628 SNORA19.1-201ENST00000410656 129 ntBASIC2.09□□□□□ -2.07
CNOT4O95628 RPL39P25-201ENST00000449384 154 ntBASIC2.09□□□□□ -2.07
CNOT4O95628 RNU2-11P-201ENST00000459191 187 ntBASIC2.09□□□□□ -2.07
CNOT4O95628 AC107297.1-201ENST00000459991 176 ntBASIC2.09□□□□□ -2.07
CNOT4O95628 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.09□□□□□ -2.07
CNOT4O95628 RNU6-970P-201ENST00000516312 107 ntBASIC2.09□□□□□ -2.07
CNOT4O95628 IGHVII-40-1-201ENST00000517316 58 ntBASIC2.09□□□□□ -2.07
CNOT4O95628 AC141557.1-201ENST00000540982 400 ntBASIC2.09□□□□□ -2.07
CNOT4O95628 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC2.09□□□□□ -2.07
CNOT4O95628 Y_RNA.818-201ENST00000618813 71 ntBASIC2.09□□□□□ -2.07
CNOT4O95628 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
CNOT4O95628 RNU6-112P-201ENST00000363599 104 ntBASIC2.08□□□□□ -2.08
CNOT4O95628 RNU6-482P-201ENST00000391068 107 ntBASIC2.08□□□□□ -2.08
CNOT4O95628 MIR1302-4-201ENST00000408701 150 ntBASIC2.08□□□□□ -2.08
CNOT4O95628 RNU2-40P-201ENST00000410833 196 ntBASIC2.08□□□□□ -2.08
CNOT4O95628 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
CNOT4O95628 RNU7-34P-201ENST00000459394 64 ntBASIC2.08□□□□□ -2.08
CNOT4O95628 RPL23AP63-201ENST00000498752 471 ntBASIC2.08□□□□□ -2.08
CNOT4O95628 RNU6-109P-201ENST00000516364 107 ntBASIC2.08□□□□□ -2.08
CNOT4O95628 RNU6-184P-201ENST00000516514 107 ntBASIC2.08□□□□□ -2.08
CNOT4O95628 SCARNA16.3-201ENST00000516595 184 ntBASIC2.08□□□□□ -2.08
CNOT4O95628 SNORA31.17-201ENST00000516953 127 ntBASIC2.08□□□□□ -2.08
CNOT4O95628 RNA5SP437-201ENST00000517249 129 ntBASIC2.08□□□□□ -2.08
CNOT4O95628 AC004812.1-201ENST00000540773 146 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms