Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 snoU13.16-201ENST00000459350 104 ntBASIC1□□□□□ -2.25
RTN3O95197 RNU6-1299P-201ENST00000516316 100 ntBASIC1□□□□□ -2.25
RTN3O95197 RNA5SP255-201ENST00000516370 107 ntBASIC1□□□□□ -2.25
RTN3O95197 Y_RNA.47-201ENST00000362697 108 ntBASIC0.99□□□□□ -2.25
RTN3O95197 RNU6-888P-201ENST00000363010 101 ntBASIC0.99□□□□□ -2.25
RTN3O95197 Y_RNA.396-201ENST00000383949 103 ntBASIC0.99□□□□□ -2.25
RTN3O95197 SNORD61-201ENST00000384252 73 ntBASIC0.99□□□□□ -2.25
RTN3O95197 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.99□□□□□ -2.25
RTN3O95197 RN7SL793P-201ENST00000583259 296 ntBASIC0.99□□□□□ -2.25
RTN3O95197 Y_RNA.30-201ENST00000362572 97 ntBASIC0.98□□□□□ -2.25
RTN3O95197 Y_RNA.37-201ENST00000362606 108 ntBASIC0.98□□□□□ -2.25
RTN3O95197 RNU6-484P-201ENST00000384016 107 ntBASIC0.98□□□□□ -2.25
RTN3O95197 Y_RNA.432-201ENST00000384087 111 ntBASIC0.98□□□□□ -2.25
RTN3O95197 SNORA2B-201ENST00000384583 137 ntBASIC0.98□□□□□ -2.25
RTN3O95197 MIR548A2-201ENST00000384956 97 ntBASIC0.98□□□□□ -2.25
RTN3O95197 MIR616-201ENST00000385293 97 ntBASIC0.98□□□□□ -2.25
RTN3O95197 MT-TN-201ENST00000387400 73 ntBASIC0.98□□□□□ -2.25
RTN3O95197 SNORA40.5-201ENST00000391061 128 ntBASIC0.98□□□□□ -2.25
RTN3O95197 RNU6-994P-201ENST00000410507 111 ntBASIC0.98□□□□□ -2.25
RTN3O95197 RNU2-70P-201ENST00000410718 179 ntBASIC0.98□□□□□ -2.25
RTN3O95197 AL358176.2-201ENST00000425769 204 ntBASIC0.98□□□□□ -2.25
RTN3O95197 AC067940.1-201ENST00000458411 300 ntBASIC0.98□□□□□ -2.25
RTN3O95197 RNU7-67P-201ENST00000459003 62 ntBASIC0.98□□□□□ -2.25
RTN3O95197 RNA5SP153-201ENST00000516498 76 ntBASIC0.98□□□□□ -2.25
RTN3O95197 RNU6-1270P-201ENST00000517128 108 ntBASIC0.98□□□□□ -2.25
RTN3O95197 AP003484.1-201ENST00000530974 250 ntBASIC0.98□□□□□ -2.25
RTN3O95197 MIR5000-201ENST00000577717 103 ntBASIC0.98□□□□□ -2.25
RTN3O95197 AC012433.1-201ENST00000588916 398 ntBASIC0.98□□□□□ -2.25
RTN3O95197 AP000942.4-201ENST00000604811 241 ntBASIC0.98□□□□□ -2.25
RTN3O95197 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.98□□□□□ -2.25
RTN3O95197 AC134878.1-201ENST00000619901 243 ntBASIC0.98□□□□□ -2.25
RTN3O95197 AL365265.1-201ENST00000621045 234 ntBASIC0.98□□□□□ -2.25
RTN3O95197 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
RTN3O95197 RNU6-1228P-201ENST00000391014 107 ntBASIC0.97□□□□□ -2.25
RTN3O95197 U7.7-201ENST00000459276 60 ntBASIC0.97□□□□□ -2.25
RTN3O95197 AL360085.1-201ENST00000604713 532 ntBASIC0.97□□□□□ -2.25
RTN3O95197 RNU6-94P-201ENST00000607728 107 ntBASIC0.97□□□□□ -2.25
RTN3O95197 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.96□□□□□ -2.26
RTN3O95197 MIR377-201ENST00000362145 69 ntBASIC0.96□□□□□ -2.26
RTN3O95197 Y_RNA.66-201ENST00000362862 102 ntBASIC0.96□□□□□ -2.26
RTN3O95197 RNU6-1309P-201ENST00000363305 108 ntBASIC0.96□□□□□ -2.26
RTN3O95197 Y_RNA.168-201ENST00000363740 102 ntBASIC0.96□□□□□ -2.26
RTN3O95197 snoU2_19.4-201ENST00000364329 80 ntBASIC0.96□□□□□ -2.26
RTN3O95197 Y_RNA.634-201ENST00000364811 113 ntBASIC0.96□□□□□ -2.26
RTN3O95197 Y_RNA.288-201ENST00000364854 92 ntBASIC0.96□□□□□ -2.26
RTN3O95197 MIR216A-201ENST00000385063 110 ntBASIC0.96□□□□□ -2.26
RTN3O95197 MT-TT-201ENST00000387460 66 ntBASIC0.96□□□□□ -2.26
RTN3O95197 AL606845.1-201ENST00000404881 255 ntBASIC0.96□□□□□ -2.26
RTN3O95197 RNU6-938P-201ENST00000411285 103 ntBASIC0.96□□□□□ -2.26
RTN3O95197 RNU6-1132P-201ENST00000459214 107 ntBASIC0.96□□□□□ -2.26
RTN3O95197 SNORA18.4-201ENST00000516440 124 ntBASIC0.96□□□□□ -2.26
RTN3O95197 AP000753.3-201ENST00000604083 169 ntBASIC0.96□□□□□ -2.26
RTN3O95197 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
RTN3O95197 Y_RNA.54-201ENST00000362766 105 ntBASIC0.95□□□□□ -2.26
RTN3O95197 RNU4-17P-201ENST00000365598 141 ntBASIC0.95□□□□□ -2.26
RTN3O95197 SNORA27-201ENST00000384323 126 ntBASIC0.95□□□□□ -2.26
RTN3O95197 Y_RNA.494-201ENST00000384432 111 ntBASIC0.95□□□□□ -2.26
RTN3O95197 MIR548H3-201ENST00000408771 118 ntBASIC0.95□□□□□ -2.26
RTN3O95197 RNA5SP95-201ENST00000410319 137 ntBASIC0.95□□□□□ -2.26
RTN3O95197 RNU2-64P-201ENST00000411315 191 ntBASIC0.95□□□□□ -2.26
RTN3O95197 ACA64.5-201ENST00000516207 127 ntBASIC0.95□□□□□ -2.26
RTN3O95197 RNU6-197P-201ENST00000516680 100 ntBASIC0.95□□□□□ -2.26
RTN3O95197 AC025627.3-201ENST00000582078 182 ntBASIC0.95□□□□□ -2.26
RTN3O95197 AC097639.2-201ENST00000603159 172 ntBASIC0.95□□□□□ -2.26
RTN3O95197 AC211469.2-201ENST00000605461 205 ntBASIC0.95□□□□□ -2.26
RTN3O95197 AL136317.1-201ENST00000612653 226 ntBASIC0.95□□□□□ -2.26
RTN3O95197 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.95□□□□□ -2.26
RTN3O95197 MIR373-201ENST00000362273 69 ntBASIC0.94□□□□□ -2.26
RTN3O95197 Y_RNA.91-201ENST00000363042 107 ntBASIC0.94□□□□□ -2.26
RTN3O95197 Y_RNA.262-201ENST00000364641 102 ntBASIC0.94□□□□□ -2.26
RTN3O95197 Y_RNA.556-201ENST00000384677 113 ntBASIC0.94□□□□□ -2.26
RTN3O95197 MIR608-201ENST00000384820 100 ntBASIC0.94□□□□□ -2.26
RTN3O95197 RNU6-381P-201ENST00000391259 108 ntBASIC0.94□□□□□ -2.26
RTN3O95197 Y_RNA.622-201ENST00000411091 108 ntBASIC0.94□□□□□ -2.26
RTN3O95197 RNU7-73P-201ENST00000458743 63 ntBASIC0.94□□□□□ -2.26
RTN3O95197 RPS29P24-201ENST00000486345 171 ntBASIC0.94□□□□□ -2.26
RTN3O95197 RNU6-327P-201ENST00000516270 127 ntBASIC0.94□□□□□ -2.26
RTN3O95197 RNU6-1110P-201ENST00000516462 101 ntBASIC0.94□□□□□ -2.26
RTN3O95197 RNU7-53P-201ENST00000516705 60 ntBASIC0.94□□□□□ -2.26
RTN3O95197 RNU6-453P-201ENST00000516819 85 ntBASIC0.94□□□□□ -2.26
RTN3O95197 RNU6-958P-201ENST00000516995 106 ntBASIC0.94□□□□□ -2.26
RTN3O95197 RNU6-653P-201ENST00000363074 106 ntBASIC0.93□□□□□ -2.26
RTN3O95197 Y_RNA.199-201ENST00000364014 102 ntBASIC0.93□□□□□ -2.26
RTN3O95197 Y_RNA.416-201ENST00000384014 113 ntBASIC0.93□□□□□ -2.26
RTN3O95197 MIR146A-201ENST00000385201 99 ntBASIC0.93□□□□□ -2.26
RTN3O95197 SNORD89-201ENST00000390981 114 ntBASIC0.93□□□□□ -2.26
RTN3O95197 MIR1302-3-201ENST00000408128 138 ntBASIC0.93□□□□□ -2.26
RTN3O95197 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.93□□□□□ -2.26
RTN3O95197 RNU2-38P-201ENST00000410856 79 ntBASIC0.93□□□□□ -2.26
RTN3O95197 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.93□□□□□ -2.26
RTN3O95197 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.93□□□□□ -2.26
RTN3O95197 SNRPGP8-201ENST00000454064 226 ntBASIC0.93□□□□□ -2.26
RTN3O95197 SNORD127-201ENST00000458892 86 ntBASIC0.93□□□□□ -2.26
RTN3O95197 SNORD36C-201ENST00000516733 66 ntBASIC0.93□□□□□ -2.26
RTN3O95197 MIR3973-201ENST00000579824 107 ntBASIC0.93□□□□□ -2.26
RTN3O95197 MIR4264-201ENST00000583520 66 ntBASIC0.93□□□□□ -2.26
RTN3O95197 AL442067.1-201ENST00000613261 223 ntBASIC0.93□□□□□ -2.26
RTN3O95197 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.92□□□□□ -2.26
RTN3O95197 SNORD45.3-201ENST00000363836 72 ntBASIC0.92□□□□□ -2.26
RTN3O95197 Y_RNA.277-201ENST00000364754 102 ntBASIC0.92□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 192.3 ms