Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 SNORD1A-201ENST00000364968 72 ntBASIC1.72□□□□□ -2.13
USP1O94782 RNU6-1189P-201ENST00000383958 107 ntBASIC1.72□□□□□ -2.13
USP1O94782 RNU6-80P-201ENST00000384195 107 ntBASIC1.72□□□□□ -2.13
USP1O94782 Y_RNA.494-201ENST00000384432 111 ntBASIC1.72□□□□□ -2.13
USP1O94782 RNU6-1081P-201ENST00000384537 107 ntBASIC1.72□□□□□ -2.13
USP1O94782 RNU1-78P-201ENST00000391248 165 ntBASIC1.72□□□□□ -2.13
USP1O94782 AL603914.1-201ENST00000401964 204 ntBASIC1.72□□□□□ -2.13
USP1O94782 RNU6-735P-201ENST00000410612 107 ntBASIC1.72□□□□□ -2.13
USP1O94782 HSPE1P24-201ENST00000450782 238 ntBASIC1.72□□□□□ -2.13
USP1O94782 Y_RNA.692-201ENST00000516627 105 ntBASIC1.72□□□□□ -2.13
USP1O94782 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.72□□□□□ -2.13
USP1O94782 AC084768.2-201ENST00000622736 221 ntBASIC1.72□□□□□ -2.13
USP1O94782 AC106754.2-201ENST00000623006 233 ntBASIC1.72□□□□□ -2.13
USP1O94782 RNU6-1290P-201ENST00000362957 109 ntBASIC1.71□□□□□ -2.14
USP1O94782 SNORD18B-201ENST00000365659 72 ntBASIC1.71□□□□□ -2.14
USP1O94782 Y_RNA.440-201ENST00000384120 114 ntBASIC1.71□□□□□ -2.14
USP1O94782 MIR653-201ENST00000385279 96 ntBASIC1.71□□□□□ -2.14
USP1O94782 AC245517.4-201ENST00000448601 281 ntBASIC1.71□□□□□ -2.14
USP1O94782 RNU1-98P-201ENST00000458992 160 ntBASIC1.71□□□□□ -2.14
USP1O94782 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.71□□□□□ -2.14
USP1O94782 RNU6-659P-201ENST00000516454 104 ntBASIC1.71□□□□□ -2.14
USP1O94782 SUMO2P16-201ENST00000519475 264 ntBASIC1.71□□□□□ -2.14
USP1O94782 AC090821.2-201ENST00000523552 176 ntBASIC1.71□□□□□ -2.14
USP1O94782 Y_RNA.757-201ENST00000578934 114 ntBASIC1.71□□□□□ -2.14
USP1O94782 MIR3121-201ENST00000579680 77 ntBASIC1.71□□□□□ -2.14
USP1O94782 MIR548AI-201ENST00000579940 88 ntBASIC1.71□□□□□ -2.14
USP1O94782 MIR4422-201ENST00000581938 83 ntBASIC1.71□□□□□ -2.14
USP1O94782 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.71□□□□□ -2.14
USP1O94782 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.71□□□□□ -2.14
USP1O94782 RNU6-457P-201ENST00000363999 107 ntBASIC1.7□□□□□ -2.14
USP1O94782 SNORA2.2-201ENST00000365473 135 ntBASIC1.7□□□□□ -2.14
USP1O94782 MIR452-201ENST00000385020 85 ntBASIC1.7□□□□□ -2.14
USP1O94782 SNX2P2-201ENST00000424553 323 ntBASIC1.7□□□□□ -2.14
USP1O94782 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.7□□□□□ -2.14
USP1O94782 AC027119.1-201ENST00000440877 241 ntBASIC1.7□□□□□ -2.14
USP1O94782 RNU6-781P-201ENST00000516377 101 ntBASIC1.7□□□□□ -2.14
USP1O94782 SNORA25.15-201ENST00000516487 89 ntBASIC1.7□□□□□ -2.14
USP1O94782 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.7□□□□□ -2.14
USP1O94782 MIR342-201ENST00000362212 99 ntBASIC1.69□□□□□ -2.14
USP1O94782 RNU1-17P-201ENST00000363022 152 ntBASIC1.69□□□□□ -2.14
USP1O94782 Y_RNA.241-201ENST00000364470 117 ntBASIC1.69□□□□□ -2.14
USP1O94782 RNA5SP205-201ENST00000364653 136 ntBASIC1.69□□□□□ -2.14
USP1O94782 RNA5SP259-201ENST00000365541 109 ntBASIC1.69□□□□□ -2.14
USP1O94782 Y_RNA.410-201ENST00000383992 113 ntBASIC1.69□□□□□ -2.14
USP1O94782 SNORD28B-201ENST00000390993 75 ntBASIC1.69□□□□□ -2.14
USP1O94782 Y_RNA.630-201ENST00000411370 108 ntBASIC1.69□□□□□ -2.14
USP1O94782 AL158147.1-201ENST00000443970 75 ntBASIC1.69□□□□□ -2.14
USP1O94782 AC079140.2-201ENST00000506193 142 ntBASIC1.69□□□□□ -2.14
USP1O94782 RNU6-1061P-201ENST00000516530 99 ntBASIC1.69□□□□□ -2.14
USP1O94782 SNORA18.7-201ENST00000516910 131 ntBASIC1.69□□□□□ -2.14
USP1O94782 IGKV1-22-201ENST00000524313 326 ntBASIC1.69□□□□□ -2.14
USP1O94782 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
USP1O94782 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.69□□□□□ -2.14
USP1O94782 MIR8063-201ENST00000621930 81 ntBASIC1.69□□□□□ -2.14
USP1O94782 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
USP1O94782 AL603825.1-201ENST00000438481 80 ntBASIC1.68□□□□□ -2.14
USP1O94782 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.68□□□□□ -2.14
USP1O94782 RNA5SP445-201ENST00000515889 115 ntBASIC1.68□□□□□ -2.14
USP1O94782 RNU6-917P-201ENST00000516294 104 ntBASIC1.68□□□□□ -2.14
USP1O94782 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.68□□□□□ -2.14
USP1O94782 MIR3683-201ENST00000580847 82 ntBASIC1.68□□□□□ -2.14
USP1O94782 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.68□□□□□ -2.14
USP1O94782 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
USP1O94782 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
USP1O94782 RNU4-16P-201ENST00000364737 141 ntBASIC1.67□□□□□ -2.14
USP1O94782 Y_RNA.366-201ENST00000365540 102 ntBASIC1.67□□□□□ -2.14
USP1O94782 MIR570-201ENST00000384917 97 ntBASIC1.67□□□□□ -2.14
USP1O94782 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.67□□□□□ -2.14
USP1O94782 SNORA40.5-201ENST00000391061 128 ntBASIC1.67□□□□□ -2.14
USP1O94782 U8.17-201ENST00000391292 132 ntBASIC1.67□□□□□ -2.14
USP1O94782 RNU6-240P-201ENST00000516098 97 ntBASIC1.67□□□□□ -2.14
USP1O94782 SNORD33.1-201ENST00000516213 88 ntBASIC1.67□□□□□ -2.14
USP1O94782 RNU6-830P-201ENST00000516353 107 ntBASIC1.67□□□□□ -2.14
USP1O94782 RNU6-250P-201ENST00000516958 103 ntBASIC1.67□□□□□ -2.14
USP1O94782 MIR4255-201ENST00000579351 72 ntBASIC1.67□□□□□ -2.14
USP1O94782 FAM106DP-201ENST00000586416 501 ntBASIC1.67□□□□□ -2.14
USP1O94782 HSPE1P19-201ENST00000603327 295 ntBASIC1.67□□□□□ -2.14
USP1O94782 MIR136-201ENST00000385207 82 ntBASIC1.66□□□□□ -2.14
USP1O94782 MTATP6P21-201ENST00000440681 189 ntBASIC1.66□□□□□ -2.14
USP1O94782 AC087499.4-201ENST00000448505 178 ntBASIC1.66□□□□□ -2.14
USP1O94782 RPS26P48-201ENST00000491713 339 ntBASIC1.66□□□□□ -2.14
USP1O94782 SNORA31.4-201ENST00000516049 129 ntBASIC1.66□□□□□ -2.14
USP1O94782 AC090049.2-201ENST00000550377 109 ntBASIC1.66□□□□□ -2.14
USP1O94782 AC133485.4-201ENST00000561835 220 ntBASIC1.66□□□□□ -2.14
USP1O94782 AC138907.4-201ENST00000570107 226 ntBASIC1.66□□□□□ -2.14
USP1O94782 AP000942.3-201ENST00000603702 160 ntBASIC1.66□□□□□ -2.14
USP1O94782 AL513534.2-201ENST00000603836 250 ntBASIC1.66□□□□□ -2.14
USP1O94782 AC091932.4-201ENST00000623386 200 ntBASIC1.66□□□□□ -2.14
USP1O94782 AL596211.1-201ENST00000569873 2277 ntBASIC1.66□□□□□ -2.14
USP1O94782 RNA5SP190-201ENST00000365222 118 ntBASIC1.65□□□□□ -2.15
USP1O94782 SNORD58C-201ENST00000365223 64 ntBASIC1.65□□□□□ -2.15
USP1O94782 SNORA27-201ENST00000384323 126 ntBASIC1.65□□□□□ -2.15
USP1O94782 RNU6-997P-201ENST00000384725 107 ntBASIC1.65□□□□□ -2.15
USP1O94782 AL627390.1-201ENST00000396055 340 ntBASIC1.65□□□□□ -2.15
USP1O94782 SNORD123-201ENST00000459473 70 ntBASIC1.65□□□□□ -2.15
USP1O94782 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.65□□□□□ -2.15
USP1O94782 AL359881.1-201ENST00000602916 267 ntBASIC1.65□□□□□ -2.15
USP1O94782 MIR502-201ENST00000606349 86 ntBASIC1.65□□□□□ -2.15
USP1O94782 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.65□□□□□ -2.15
USP1O94782 MIR8081-201ENST00000611533 95 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms