Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 MTND4LP9-201ENST00000427694 174 ntBASIC1.75□□□□□ -2.13
VPS4BO75351 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1.75□□□□□ -2.13
VPS4BO75351 snoU13.18-201ENST00000459483 104 ntBASIC1.75□□□□□ -2.13
VPS4BO75351 RNA5SP272-201ENST00000516095 111 ntBASIC1.75□□□□□ -2.13
VPS4BO75351 RNU6-250P-201ENST00000516958 103 ntBASIC1.75□□□□□ -2.13
VPS4BO75351 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.75□□□□□ -2.13
VPS4BO75351 MIR3122-201ENST00000577243 73 ntBASIC1.75□□□□□ -2.13
VPS4BO75351 MIR3683-201ENST00000580847 82 ntBASIC1.75□□□□□ -2.13
VPS4BO75351 SNORD115-40-201ENST00000606510 82 ntBASIC1.75□□□□□ -2.13
VPS4BO75351 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.75□□□□□ -2.13
VPS4BO75351 AL627390.1-201ENST00000396055 340 ntBASIC1.74□□□□□ -2.13
VPS4BO75351 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.74□□□□□ -2.13
VPS4BO75351 SNORD123-201ENST00000459473 70 ntBASIC1.74□□□□□ -2.13
VPS4BO75351 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.74□□□□□ -2.13
VPS4BO75351 SNORA44.1-201ENST00000517031 108 ntBASIC1.74□□□□□ -2.13
VPS4BO75351 SNORA74.3-201ENST00000517108 154 ntBASIC1.74□□□□□ -2.13
VPS4BO75351 FAM106DP-201ENST00000586416 501 ntBASIC1.74□□□□□ -2.13
VPS4BO75351 AC132825.6-201ENST00000638861 357 ntBASIC1.74□□□□□ -2.13
VPS4BO75351 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.74□□□□□ -2.13
VPS4BO75351 MTND5P32-201ENST00000560711 1802 ntBASIC1.73□□□□□ -2.13
VPS4BO75351 RPS26P48-201ENST00000491713 339 ntBASIC1.73□□□□□ -2.13
VPS4BO75351 RNU6-1149P-201ENST00000516810 97 ntBASIC1.73□□□□□ -2.13
VPS4BO75351 AP001328.1-201ENST00000528550 176 ntBASIC1.73□□□□□ -2.13
VPS4BO75351 AC084768.2-201ENST00000622736 221 ntBASIC1.73□□□□□ -2.13
VPS4BO75351 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.73□□□□□ -2.13
VPS4BO75351 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.73□□□□□ -2.13
VPS4BO75351 U8.1-201ENST00000362843 134 ntBASIC1.72□□□□□ -2.13
VPS4BO75351 Y_RNA.224-201ENST00000364308 111 ntBASIC1.72□□□□□ -2.13
VPS4BO75351 Y_RNA.280-201ENST00000364765 112 ntBASIC1.72□□□□□ -2.13
VPS4BO75351 RNU6-915P-201ENST00000364943 103 ntBASIC1.72□□□□□ -2.13
VPS4BO75351 SNORA1.2-201ENST00000365189 134 ntBASIC1.72□□□□□ -2.13
VPS4BO75351 SNORA24-201ENST00000384096 131 ntBASIC1.72□□□□□ -2.13
VPS4BO75351 Y_RNA.494-201ENST00000384432 111 ntBASIC1.72□□□□□ -2.13
VPS4BO75351 SNORA20-201ENST00000384662 132 ntBASIC1.72□□□□□ -2.13
VPS4BO75351 SNORA67.5-201ENST00000391036 107 ntBASIC1.72□□□□□ -2.13
VPS4BO75351 AP1B1P2-201ENST00000416196 106 ntBASIC1.72□□□□□ -2.13
VPS4BO75351 Y_RNA.686-201ENST00000516548 134 ntBASIC1.72□□□□□ -2.13
VPS4BO75351 RNU7-181P-201ENST00000517234 74 ntBASIC1.72□□□□□ -2.13
VPS4BO75351 MIR3198-2-201ENST00000577868 80 ntBASIC1.72□□□□□ -2.13
VPS4BO75351 MIR548AR-201ENST00000582191 57 ntBASIC1.72□□□□□ -2.13
VPS4BO75351 AL513534.2-201ENST00000603836 250 ntBASIC1.72□□□□□ -2.13
VPS4BO75351 TUG1_4.1-201ENST00000619464 181 ntBASIC1.72□□□□□ -2.13
VPS4BO75351 AC106754.2-201ENST00000623006 233 ntBASIC1.72□□□□□ -2.13
VPS4BO75351 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.72□□□□□ -2.13
VPS4BO75351 SNORD48-201ENST00000364953 64 ntBASIC1.71□□□□□ -2.14
VPS4BO75351 RNA5SP259-201ENST00000365541 109 ntBASIC1.71□□□□□ -2.14
VPS4BO75351 MIR489-201ENST00000384923 84 ntBASIC1.71□□□□□ -2.14
VPS4BO75351 RNU4-62P-201ENST00000410125 130 ntBASIC1.71□□□□□ -2.14
VPS4BO75351 snoU13.9-201ENST00000458927 103 ntBASIC1.71□□□□□ -2.14
VPS4BO75351 MIR3121-201ENST00000579680 77 ntBASIC1.71□□□□□ -2.14
VPS4BO75351 U7.2-201ENST00000607576 63 ntBASIC1.71□□□□□ -2.14
VPS4BO75351 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.71□□□□□ -2.14
VPS4BO75351 ICE2P2-201ENST00000483823 2787 ntBASIC1.71□□□□□ -2.14
VPS4BO75351 SNORA27-201ENST00000384323 126 ntBASIC1.7□□□□□ -2.14
VPS4BO75351 SNORD41-201ENST00000386967 70 ntBASIC1.7□□□□□ -2.14
VPS4BO75351 MTATP6P21-201ENST00000440681 189 ntBASIC1.7□□□□□ -2.14
VPS4BO75351 AC005908.1-201ENST00000468701 347 ntBASIC1.7□□□□□ -2.14
VPS4BO75351 RNU7-43P-201ENST00000516554 64 ntBASIC1.7□□□□□ -2.14
VPS4BO75351 SNORA18.7-201ENST00000516910 131 ntBASIC1.7□□□□□ -2.14
VPS4BO75351 MIR502-201ENST00000606349 86 ntBASIC1.7□□□□□ -2.14
VPS4BO75351 AL512598.1-201ENST00000610158 273 ntBASIC1.7□□□□□ -2.14
VPS4BO75351 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.7□□□□□ -2.14
VPS4BO75351 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
VPS4BO75351 AL157777.2-201ENST00000258070 137 ntBASIC1.69□□□□□ -2.14
VPS4BO75351 Y_RNA.241-201ENST00000364470 117 ntBASIC1.69□□□□□ -2.14
VPS4BO75351 SNORD1A-201ENST00000364968 72 ntBASIC1.69□□□□□ -2.14
VPS4BO75351 Y_RNA.370-201ENST00000365589 108 ntBASIC1.69□□□□□ -2.14
VPS4BO75351 SNORD28B-201ENST00000390993 75 ntBASIC1.69□□□□□ -2.14
VPS4BO75351 Y_RNA.651-201ENST00000459380 103 ntBASIC1.69□□□□□ -2.14
VPS4BO75351 AC008834.1-201ENST00000511612 175 ntBASIC1.69□□□□□ -2.14
VPS4BO75351 RNU6-322P-201ENST00000516010 103 ntBASIC1.69□□□□□ -2.14
VPS4BO75351 AC090821.2-201ENST00000523552 176 ntBASIC1.69□□□□□ -2.14
VPS4BO75351 BX248123.2-201ENST00000606318 124 ntBASIC1.69□□□□□ -2.14
VPS4BO75351 MIR8081-201ENST00000611533 95 ntBASIC1.69□□□□□ -2.14
VPS4BO75351 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.69□□□□□ -2.14
VPS4BO75351 AC091895.1-201ENST00000624494 256 ntBASIC1.69□□□□□ -2.14
VPS4BO75351 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
VPS4BO75351 RNU6-309P-201ENST00000364573 106 ntBASIC1.68□□□□□ -2.14
VPS4BO75351 Y_RNA.537-201ENST00000384626 109 ntBASIC1.68□□□□□ -2.14
VPS4BO75351 RNU6-959P-201ENST00000384671 107 ntBASIC1.68□□□□□ -2.14
VPS4BO75351 AL451046.2-201ENST00000403074 277 ntBASIC1.68□□□□□ -2.14
VPS4BO75351 AC003989.2-201ENST00000440224 169 ntBASIC1.68□□□□□ -2.14
VPS4BO75351 RNU7-96P-201ENST00000459535 64 ntBASIC1.68□□□□□ -2.14
VPS4BO75351 RNU7-80P-201ENST00000459562 61 ntBASIC1.68□□□□□ -2.14
VPS4BO75351 RPS29P24-201ENST00000486345 171 ntBASIC1.68□□□□□ -2.14
VPS4BO75351 RNU6-998P-201ENST00000515894 101 ntBASIC1.68□□□□□ -2.14
VPS4BO75351 Y_RNA.692-201ENST00000516627 105 ntBASIC1.68□□□□□ -2.14
VPS4BO75351 DNAJC19P9-201ENST00000555084 351 ntBASIC1.68□□□□□ -2.14
VPS4BO75351 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.68□□□□□ -2.14
VPS4BO75351 SNORD33-201ENST00000362761 85 ntBASIC1.67□□□□□ -2.14
VPS4BO75351 SNORD18B-201ENST00000365659 72 ntBASIC1.67□□□□□ -2.14
VPS4BO75351 MIR539-201ENST00000365690 78 ntBASIC1.67□□□□□ -2.14
VPS4BO75351 AC027119.1-201ENST00000440877 241 ntBASIC1.67□□□□□ -2.14
VPS4BO75351 Y_RNA.690-201ENST00000516603 95 ntBASIC1.67□□□□□ -2.14
VPS4BO75351 RNU6-113P-201ENST00000516653 101 ntBASIC1.67□□□□□ -2.14
VPS4BO75351 MIR4764-201ENST00000580680 88 ntBASIC1.67□□□□□ -2.14
VPS4BO75351 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.66□□□□□ -2.14
VPS4BO75351 RNU6-508P-201ENST00000363231 103 ntBASIC1.66□□□□□ -2.14
VPS4BO75351 Y_RNA.351-201ENST00000365436 96 ntBASIC1.66□□□□□ -2.14
VPS4BO75351 AC107297.1-201ENST00000459991 176 ntBASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 223 ms