Protein–RNA interactions for Protein: O43542

XRCC3, DNA repair protein XRCC3, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3O43542 AC134878.1-201ENST00000619901 243 ntBASIC0.99□□□□□ -2.25
XRCC3O43542 AL391516.1-201ENST00000554380 2449 ntBASIC0.99□□□□□ -2.25
XRCC3O43542 Y_RNA.330-201ENST00000365230 109 ntBASIC0.98□□□□□ -2.25
XRCC3O43542 RNU6-728P-201ENST00000365375 104 ntBASIC0.98□□□□□ -2.25
XRCC3O43542 MIR200A-201ENST00000384875 90 ntBASIC0.98□□□□□ -2.25
XRCC3O43542 RNU4-43P-201ENST00000410628 137 ntBASIC0.98□□□□□ -2.25
XRCC3O43542 MRPL35P3-201ENST00000421557 364 ntBASIC0.98□□□□□ -2.25
XRCC3O43542 OR2A41P-201ENST00000473586 105 ntBASIC0.98□□□□□ -2.25
XRCC3O43542 RNU4-71P-201ENST00000516258 113 ntBASIC0.98□□□□□ -2.25
XRCC3O43542 RNU6-197P-201ENST00000516680 100 ntBASIC0.98□□□□□ -2.25
XRCC3O43542 AP003484.1-201ENST00000530974 250 ntBASIC0.98□□□□□ -2.25
XRCC3O43542 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
XRCC3O43542 Y_RNA.144-201ENST00000363521 113 ntBASIC0.97□□□□□ -2.25
XRCC3O43542 SNORD114-24-201ENST00000365029 72 ntBASIC0.97□□□□□ -2.25
XRCC3O43542 Y_RNA.308-201ENST00000365043 101 ntBASIC0.97□□□□□ -2.25
XRCC3O43542 SNORD114-22-201ENST00000365423 72 ntBASIC0.97□□□□□ -2.25
XRCC3O43542 Y_RNA.447-201ENST00000384184 113 ntBASIC0.97□□□□□ -2.25
XRCC3O43542 RNU6-574P-201ENST00000384265 107 ntBASIC0.97□□□□□ -2.25
XRCC3O43542 Y_RNA.626-201ENST00000411288 95 ntBASIC0.97□□□□□ -2.25
XRCC3O43542 snoU13.16-201ENST00000459350 104 ntBASIC0.97□□□□□ -2.25
XRCC3O43542 RNU6-561P-201ENST00000516222 102 ntBASIC0.97□□□□□ -2.25
XRCC3O43542 RNY3P16-201ENST00000516338 101 ntBASIC0.97□□□□□ -2.25
XRCC3O43542 SNORA18.4-201ENST00000516440 124 ntBASIC0.97□□□□□ -2.25
XRCC3O43542 AC004817.2-201ENST00000561794 651 ntBASIC0.97□□□□□ -2.25
XRCC3O43542 MIR548AO-201ENST00000579992 96 ntBASIC0.97□□□□□ -2.25
XRCC3O43542 MIR4744-201ENST00000581563 82 ntBASIC0.97□□□□□ -2.25
XRCC3O43542 HSPE1P19-201ENST00000603327 295 ntBASIC0.97□□□□□ -2.25
XRCC3O43542 AP000942.4-201ENST00000604811 241 ntBASIC0.97□□□□□ -2.25
XRCC3O43542 MIR6516-201ENST00000630554 81 ntBASIC0.97□□□□□ -2.25
XRCC3O43542 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
XRCC3O43542 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.96□□□□□ -2.25
XRCC3O43542 Y_RNA.60-201ENST00000362831 98 ntBASIC0.96□□□□□ -2.26
XRCC3O43542 SNORA20.1-201ENST00000364790 130 ntBASIC0.96□□□□□ -2.26
XRCC3O43542 Y_RNA.410-201ENST00000383992 113 ntBASIC0.96□□□□□ -2.26
XRCC3O43542 AF228730.3-201ENST00000436691 102 ntBASIC0.96□□□□□ -2.26
XRCC3O43542 SNORD124-201ENST00000459577 104 ntBASIC0.96□□□□□ -2.26
XRCC3O43542 MIR2115-201ENST00000516657 100 ntBASIC0.96□□□□□ -2.26
XRCC3O43542 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.96□□□□□ -2.26
XRCC3O43542 AC131055.1-201ENST00000584626 316 ntBASIC0.96□□□□□ -2.26
XRCC3O43542 AC012676.2-201ENST00000619258 186 ntBASIC0.96□□□□□ -2.26
XRCC3O43542 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
XRCC3O43542 Y_RNA.121-201ENST00000363309 113 ntBASIC0.95□□□□□ -2.26
XRCC3O43542 RNY1-201ENST00000364228 113 ntBASIC0.95□□□□□ -2.26
XRCC3O43542 Y_RNA.307-201ENST00000365022 117 ntBASIC0.95□□□□□ -2.26
XRCC3O43542 RNU6-396P-201ENST00000365369 105 ntBASIC0.95□□□□□ -2.26
XRCC3O43542 SNORA22-201ENST00000383907 134 ntBASIC0.95□□□□□ -2.26
XRCC3O43542 SNORA27-201ENST00000384323 126 ntBASIC0.95□□□□□ -2.26
XRCC3O43542 SNORA22C-201ENST00000384614 134 ntBASIC0.95□□□□□ -2.26
XRCC3O43542 SNORA79-201ENST00000408376 140 ntBASIC0.95□□□□□ -2.26
XRCC3O43542 RNU6-613P-201ENST00000410412 108 ntBASIC0.95□□□□□ -2.26
XRCC3O43542 RNU7-67P-201ENST00000459003 62 ntBASIC0.95□□□□□ -2.26
XRCC3O43542 SNORD36C-201ENST00000516733 66 ntBASIC0.95□□□□□ -2.26
XRCC3O43542 RNU6-111P-201ENST00000517179 105 ntBASIC0.95□□□□□ -2.26
XRCC3O43542 AC036111.3-201ENST00000526389 112 ntBASIC0.95□□□□□ -2.26
XRCC3O43542 AC106800.4-201ENST00000614905 153 ntBASIC0.95□□□□□ -2.26
XRCC3O43542 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC0.94□□□□□ -2.26
XRCC3O43542 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
XRCC3O43542 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
XRCC3O43542 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.94□□□□□ -2.26
XRCC3O43542 Y_RNA.7-201ENST00000362352 102 ntBASIC0.94□□□□□ -2.26
XRCC3O43542 Y_RNA.23-201ENST00000362496 106 ntBASIC0.94□□□□□ -2.26
XRCC3O43542 SNORD114-27-201ENST00000363766 70 ntBASIC0.94□□□□□ -2.26
XRCC3O43542 RNU6-53P-201ENST00000365367 106 ntBASIC0.94□□□□□ -2.26
XRCC3O43542 MT-TN-201ENST00000387400 73 ntBASIC0.94□□□□□ -2.26
XRCC3O43542 RNU6-493P-201ENST00000391321 108 ntBASIC0.94□□□□□ -2.26
XRCC3O43542 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
XRCC3O43542 AC103810.9-201ENST00000606688 112 ntBASIC0.94□□□□□ -2.26
XRCC3O43542 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
XRCC3O43542 RNU6-654P-201ENST00000364373 107 ntBASIC0.93□□□□□ -2.26
XRCC3O43542 SNORD113.3-201ENST00000364630 78 ntBASIC0.93□□□□□ -2.26
XRCC3O43542 RNU6-1189P-201ENST00000383958 107 ntBASIC0.93□□□□□ -2.26
XRCC3O43542 RNU6-578P-201ENST00000390980 103 ntBASIC0.93□□□□□ -2.26
XRCC3O43542 SNORD111-201ENST00000408139 94 ntBASIC0.93□□□□□ -2.26
XRCC3O43542 RNU7-73P-201ENST00000458743 63 ntBASIC0.93□□□□□ -2.26
XRCC3O43542 RPS29P24-201ENST00000486345 171 ntBASIC0.93□□□□□ -2.26
XRCC3O43542 UBL5P1-201ENST00000507979 193 ntBASIC0.93□□□□□ -2.26
XRCC3O43542 RNU6-958P-201ENST00000516995 106 ntBASIC0.93□□□□□ -2.26
XRCC3O43542 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC0.93□□□□□ -2.26
XRCC3O43542 AC023827.1-201ENST00000569247 97 ntBASIC0.93□□□□□ -2.26
XRCC3O43542 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.93□□□□□ -2.26
XRCC3O43542 AC108706.1-201ENST00000611053 297 ntBASIC0.93□□□□□ -2.26
XRCC3O43542 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.92□□□□□ -2.26
XRCC3O43542 SNORA1-201ENST00000384107 130 ntBASIC0.92□□□□□ -2.26
XRCC3O43542 Y_RNA.542-201ENST00000384641 111 ntBASIC0.92□□□□□ -2.26
XRCC3O43542 MIR613-201ENST00000385248 95 ntBASIC0.92□□□□□ -2.26
XRCC3O43542 SNORD77.3-201ENST00000391113 65 ntBASIC0.92□□□□□ -2.26
XRCC3O43542 AL121914.1-201ENST00000450188 156 ntBASIC0.92□□□□□ -2.26
XRCC3O43542 RNU7-53P-201ENST00000516705 60 ntBASIC0.92□□□□□ -2.26
XRCC3O43542 MIR4308-201ENST00000580634 81 ntBASIC0.92□□□□□ -2.26
XRCC3O43542 MIR4661-201ENST00000582720 75 ntBASIC0.92□□□□□ -2.26
XRCC3O43542 RNU2-4P-201ENST00000606190 192 ntBASIC0.92□□□□□ -2.26
XRCC3O43542 RMST_2.1-201ENST00000617263 136 ntBASIC0.92□□□□□ -2.26
XRCC3O43542 RNU6-923P-201ENST00000364753 107 ntBASIC0.91□□□□□ -2.26
XRCC3O43542 Y_RNA.440-201ENST00000384120 114 ntBASIC0.91□□□□□ -2.26
XRCC3O43542 Y_RNA.571-201ENST00000384753 98 ntBASIC0.91□□□□□ -2.26
XRCC3O43542 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.91□□□□□ -2.26
XRCC3O43542 MIR942-201ENST00000401111 86 ntBASIC0.91□□□□□ -2.26
XRCC3O43542 AL035398.1-201ENST00000430869 322 ntBASIC0.91□□□□□ -2.26
XRCC3O43542 FABP5P4-201ENST00000437203 171 ntBASIC0.91□□□□□ -2.26
XRCC3O43542 RNU7-96P-201ENST00000459535 64 ntBASIC0.91□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 208.6 ms