Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.83□□□□□ -2.12
PROM1O43490 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.82□□□□□ -2.12
PROM1O43490 AL596211.1-201ENST00000569873 2277 ntBASIC1.82□□□□□ -2.12
PROM1O43490 RNU6-661P-201ENST00000362409 107 ntBASIC1.82□□□□□ -2.12
PROM1O43490 Y_RNA.118-201ENST00000363300 101 ntBASIC1.82□□□□□ -2.12
PROM1O43490 RNU1-133P-201ENST00000364867 167 ntBASIC1.82□□□□□ -2.12
PROM1O43490 Y_RNA.353-201ENST00000365440 108 ntBASIC1.82□□□□□ -2.12
PROM1O43490 Y_RNA.466-201ENST00000384294 113 ntBASIC1.82□□□□□ -2.12
PROM1O43490 MIR136-201ENST00000385207 82 ntBASIC1.82□□□□□ -2.12
PROM1O43490 MIR934-201ENST00000401241 83 ntBASIC1.82□□□□□ -2.12
PROM1O43490 MIR1287-201ENST00000408492 90 ntBASIC1.82□□□□□ -2.12
PROM1O43490 MIR1267-201ENST00000408723 78 ntBASIC1.82□□□□□ -2.12
PROM1O43490 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.82□□□□□ -2.12
PROM1O43490 RPL31P63-201ENST00000422565 375 ntBASIC1.82□□□□□ -2.12
PROM1O43490 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.82□□□□□ -2.12
PROM1O43490 RNU6-781P-201ENST00000516377 101 ntBASIC1.82□□□□□ -2.12
PROM1O43490 Y_RNA.712-201ENST00000517011 92 ntBASIC1.82□□□□□ -2.12
PROM1O43490 MIR4781-201ENST00000585250 76 ntBASIC1.82□□□□□ -2.12
PROM1O43490 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.82□□□□□ -2.12
PROM1O43490 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
PROM1O43490 MIR424-201ENST00000362227 98 ntBASIC1.81□□□□□ -2.12
PROM1O43490 SNORD58C-201ENST00000365223 64 ntBASIC1.81□□□□□ -2.12
PROM1O43490 RNU6-690P-201ENST00000365242 106 ntBASIC1.81□□□□□ -2.12
PROM1O43490 RNU6-1056P-201ENST00000383996 107 ntBASIC1.81□□□□□ -2.12
PROM1O43490 SNORD20-201ENST00000384550 80 ntBASIC1.81□□□□□ -2.12
PROM1O43490 MIR583-201ENST00000384846 75 ntBASIC1.81□□□□□ -2.12
PROM1O43490 RNU6-360P-201ENST00000390944 104 ntBASIC1.81□□□□□ -2.12
PROM1O43490 U8.17-201ENST00000391292 132 ntBASIC1.81□□□□□ -2.12
PROM1O43490 MIR1263-201ENST00000408324 86 ntBASIC1.81□□□□□ -2.12
PROM1O43490 Y_RNA.630-201ENST00000411370 108 ntBASIC1.81□□□□□ -2.12
PROM1O43490 RNU7-80P-201ENST00000459562 61 ntBASIC1.81□□□□□ -2.12
PROM1O43490 RN7SKP19-201ENST00000516016 252 ntBASIC1.81□□□□□ -2.12
PROM1O43490 RNA5SP182-201ENST00000516064 82 ntBASIC1.81□□□□□ -2.12
PROM1O43490 RNU6-240P-201ENST00000516098 97 ntBASIC1.81□□□□□ -2.12
PROM1O43490 RNU6-830P-201ENST00000516353 107 ntBASIC1.81□□□□□ -2.12
PROM1O43490 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.81□□□□□ -2.12
PROM1O43490 AC106754.2-201ENST00000623006 233 ntBASIC1.81□□□□□ -2.12
PROM1O43490 MIR3914-2-201ENST00000637339 95 ntBASIC1.81□□□□□ -2.12
PROM1O43490 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.8□□□□□ -2.12
PROM1O43490 Y_RNA.366-201ENST00000365540 102 ntBASIC1.8□□□□□ -2.12
PROM1O43490 SNORA27-201ENST00000384323 126 ntBASIC1.8□□□□□ -2.12
PROM1O43490 MIR30A-201ENST00000385092 71 ntBASIC1.8□□□□□ -2.12
PROM1O43490 AL627390.1-201ENST00000396055 340 ntBASIC1.8□□□□□ -2.12
PROM1O43490 AC108667.1-201ENST00000428618 249 ntBASIC1.8□□□□□ -2.12
PROM1O43490 AC003989.2-201ENST00000440224 169 ntBASIC1.8□□□□□ -2.12
PROM1O43490 RNU6-113P-201ENST00000516653 101 ntBASIC1.8□□□□□ -2.12
PROM1O43490 AC090821.2-201ENST00000523552 176 ntBASIC1.8□□□□□ -2.12
PROM1O43490 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.8□□□□□ -2.12
PROM1O43490 U6.95-201ENST00000636931 70 ntBASIC1.8□□□□□ -2.12
PROM1O43490 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.8□□□□□ -2.12
PROM1O43490 AL391516.1-201ENST00000554380 2449 ntBASIC1.8□□□□□ -2.12
PROM1O43490 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.79□□□□□ -2.12
PROM1O43490 Y_RNA.454-201ENST00000384224 113 ntBASIC1.79□□□□□ -2.12
PROM1O43490 MIR526A1-201ENST00000384897 85 ntBASIC1.79□□□□□ -2.12
PROM1O43490 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
PROM1O43490 RNU6-1064P-201ENST00000410626 104 ntBASIC1.79□□□□□ -2.12
PROM1O43490 Y_RNA.617-201ENST00000410920 90 ntBASIC1.79□□□□□ -2.12
PROM1O43490 MTATP6P29-201ENST00000415057 132 ntBASIC1.79□□□□□ -2.12
PROM1O43490 AC107297.1-201ENST00000459991 176 ntBASIC1.79□□□□□ -2.12
PROM1O43490 SNORD33.1-201ENST00000516213 88 ntBASIC1.79□□□□□ -2.12
PROM1O43490 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.79□□□□□ -2.12
PROM1O43490 MIR3122-201ENST00000577243 73 ntBASIC1.79□□□□□ -2.12
PROM1O43490 FAM106DP-201ENST00000586416 501 ntBASIC1.79□□□□□ -2.12
PROM1O43490 AC025166.1-201ENST00000612411 163 ntBASIC1.79□□□□□ -2.12
PROM1O43490 AL137067.1-201ENST00000615933 120 ntBASIC1.79□□□□□ -2.12
PROM1O43490 AC091932.4-201ENST00000623386 200 ntBASIC1.79□□□□□ -2.12
PROM1O43490 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
PROM1O43490 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
PROM1O43490 MIR302B-201ENST00000362188 73 ntBASIC1.78□□□□□ -2.12
PROM1O43490 RNU6-414P-201ENST00000363705 104 ntBASIC1.78□□□□□ -2.12
PROM1O43490 RNU6-457P-201ENST00000363999 107 ntBASIC1.78□□□□□ -2.12
PROM1O43490 RNU6-1325P-201ENST00000364905 105 ntBASIC1.78□□□□□ -2.12
PROM1O43490 SNORA1.2-201ENST00000365189 134 ntBASIC1.78□□□□□ -2.12
PROM1O43490 RNU6-203P-201ENST00000384038 104 ntBASIC1.78□□□□□ -2.12
PROM1O43490 Y_RNA.563-201ENST00000384707 108 ntBASIC1.78□□□□□ -2.12
PROM1O43490 RNU6-476P-201ENST00000384726 107 ntBASIC1.78□□□□□ -2.12
PROM1O43490 SNORA40.18-201ENST00000391200 128 ntBASIC1.78□□□□□ -2.12
PROM1O43490 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC1.78□□□□□ -2.12
PROM1O43490 RPS26P48-201ENST00000491713 339 ntBASIC1.78□□□□□ -2.12
PROM1O43490 SUMO2P16-201ENST00000519475 264 ntBASIC1.78□□□□□ -2.12
PROM1O43490 IGKV1-22-201ENST00000524313 326 ntBASIC1.78□□□□□ -2.12
PROM1O43490 AL121890.5-201ENST00000620848 304 ntBASIC1.78□□□□□ -2.12
PROM1O43490 RNU6-834P-201ENST00000362367 110 ntBASIC1.77□□□□□ -2.13
PROM1O43490 SNORD115-34-201ENST00000362441 82 ntBASIC1.77□□□□□ -2.13
PROM1O43490 SNORD115-12-201ENST00000362583 82 ntBASIC1.77□□□□□ -2.13
PROM1O43490 SNORD115-29-201ENST00000362834 82 ntBASIC1.77□□□□□ -2.13
PROM1O43490 SNORD115-9-201ENST00000362912 82 ntBASIC1.77□□□□□ -2.13
PROM1O43490 SNORD115-21-201ENST00000362963 81 ntBASIC1.77□□□□□ -2.13
PROM1O43490 SNORD115-14-201ENST00000363090 81 ntBASIC1.77□□□□□ -2.13
PROM1O43490 SNORD115-13-201ENST00000363358 82 ntBASIC1.77□□□□□ -2.13
PROM1O43490 SNORD115-41-201ENST00000363608 82 ntBASIC1.77□□□□□ -2.13
PROM1O43490 SNORD115-11-201ENST00000363616 82 ntBASIC1.77□□□□□ -2.13
PROM1O43490 SNORD115-5-201ENST00000363633 82 ntBASIC1.77□□□□□ -2.13
PROM1O43490 SNORD115-39-201ENST00000363694 82 ntBASIC1.77□□□□□ -2.13
PROM1O43490 SNORD115-4-201ENST00000363810 82 ntBASIC1.77□□□□□ -2.13
PROM1O43490 SNORD115-16-201ENST00000363887 82 ntBASIC1.77□□□□□ -2.13
PROM1O43490 SNORD115-6-201ENST00000363942 82 ntBASIC1.77□□□□□ -2.13
PROM1O43490 SNORD115-42-201ENST00000364273 82 ntBASIC1.77□□□□□ -2.13
PROM1O43490 RNU4-16P-201ENST00000364737 141 ntBASIC1.77□□□□□ -2.13
PROM1O43490 SNORD115-15-201ENST00000364809 81 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms