Protein–RNA interactions for Protein: O15240

VGF, Neurosecretory protein VGF, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGFO15240 RNU6-1067P-201ENST00000384752 107 ntBASIC4.02□□□□□ -1.77
VGFO15240 RNU6ATAC41P-201ENST00000408600 126 ntBASIC4.02□□□□□ -1.77
VGFO15240 RNA5SP21-201ENST00000410917 96 ntBASIC4.02□□□□□ -1.77
VGFO15240 BX510359.4-201ENST00000423750 193 ntBASIC4.02□□□□□ -1.77
VGFO15240 AC245047.7-201ENST00000440265 293 ntBASIC4.02□□□□□ -1.77
VGFO15240 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC4.02□□□□□ -1.77
VGFO15240 SNORD123-201ENST00000459473 70 ntBASIC4.02□□□□□ -1.77
VGFO15240 AC022202.1-201ENST00000613515 211 ntBASIC4.02□□□□□ -1.77
VGFO15240 RNU6-859P-201ENST00000362728 107 ntBASIC4.01□□□□□ -1.77
VGFO15240 RNU6-826P-201ENST00000516827 104 ntBASIC4.01□□□□□ -1.77
VGFO15240 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC4.01□□□□□ -1.77
VGFO15240 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
VGFO15240 RNU1-109P-201ENST00000383960 147 ntBASIC4□□□□□ -1.77
VGFO15240 RNU6-342P-201ENST00000384521 104 ntBASIC4□□□□□ -1.77
VGFO15240 HMGN1P33-201ENST00000432945 451 ntBASIC4□□□□□ -1.77
VGFO15240 MIR4435-1-201ENST00000582552 80 ntBASIC4□□□□□ -1.77
VGFO15240 AC005336.3-201ENST00000623833 2679 ntBASIC4□□□□□ -1.77
VGFO15240 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC4□□□□□ -1.77
VGFO15240 RNU1-91P-201ENST00000364746 163 ntBASIC3.99□□□□□ -1.77
VGFO15240 RNU6-865P-201ENST00000364772 107 ntBASIC3.99□□□□□ -1.77
VGFO15240 Y_RNA.316-201ENST00000365118 111 ntBASIC3.99□□□□□ -1.77
VGFO15240 MIR34C-201ENST00000384831 77 ntBASIC3.99□□□□□ -1.77
VGFO15240 SEPT14P17-201ENST00000617978 177 ntBASIC3.99□□□□□ -1.77
VGFO15240 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC3.99□□□□□ -1.77
VGFO15240 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
VGFO15240 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
VGFO15240 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.98□□□□□ -1.77
VGFO15240 AC009487.2-201ENST00000420969 6821 ntBASIC3.97□□□□□ -1.77
VGFO15240 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
VGFO15240 AP006437.1-201ENST00000641440 3685 ntBASIC3.97□□□□□ -1.77
VGFO15240 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
VGFO15240 U8.9-201ENST00000365667 134 ntBASIC3.97□□□□□ -1.77
VGFO15240 Y_RNA.567-201ENST00000384736 106 ntBASIC3.97□□□□□ -1.77
VGFO15240 SNORA46-201ENST00000384762 135 ntBASIC3.97□□□□□ -1.77
VGFO15240 RNU6-1307P-201ENST00000391012 103 ntBASIC3.97□□□□□ -1.77
VGFO15240 RNU11-3P-201ENST00000391111 133 ntBASIC3.97□□□□□ -1.77
VGFO15240 RNU2-7P-201ENST00000410794 178 ntBASIC3.97□□□□□ -1.77
VGFO15240 RNU7-35P-201ENST00000517174 62 ntBASIC3.97□□□□□ -1.77
VGFO15240 MIR3126-201ENST00000577443 74 ntBASIC3.97□□□□□ -1.77
VGFO15240 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
VGFO15240 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
VGFO15240 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC3.96□□□□□ -1.78
VGFO15240 RNU6-1244P-201ENST00000363614 108 ntBASIC3.96□□□□□ -1.78
VGFO15240 Y_RNA.448-201ENST00000384185 108 ntBASIC3.96□□□□□ -1.78
VGFO15240 Y_RNA.537-201ENST00000384626 109 ntBASIC3.96□□□□□ -1.78
VGFO15240 MIR597-201ENST00000384968 97 ntBASIC3.96□□□□□ -1.78
VGFO15240 MIR548G-201ENST00000408442 89 ntBASIC3.96□□□□□ -1.78
VGFO15240 snoU13.16-201ENST00000459350 104 ntBASIC3.96□□□□□ -1.78
VGFO15240 RNU6-90P-201ENST00000606352 106 ntBASIC3.96□□□□□ -1.78
VGFO15240 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
VGFO15240 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
VGFO15240 RNA5SP344-201ENST00000411081 104 ntBASIC3.95□□□□□ -1.78
VGFO15240 AL513328.1-201ENST00000446460 224 ntBASIC3.95□□□□□ -1.78
VGFO15240 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
VGFO15240 AC093010.3-201ENST00000570269 15214 ntBASIC3.94□□□□□ -1.78
VGFO15240 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
VGFO15240 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
VGFO15240 MIR148B-201ENST00000362252 99 ntBASIC3.94□□□□□ -1.78
VGFO15240 RNA5SP68-201ENST00000363885 119 ntBASIC3.94□□□□□ -1.78
VGFO15240 Y_RNA.354-201ENST00000365448 111 ntBASIC3.94□□□□□ -1.78
VGFO15240 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.94□□□□□ -1.78
VGFO15240 SPINT5P-201ENST00000448174 155 ntBASIC3.94□□□□□ -1.78
VGFO15240 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
VGFO15240 RNU6-457P-201ENST00000363999 107 ntBASIC3.93□□□□□ -1.78
VGFO15240 SNORA67.4-201ENST00000384688 142 ntBASIC3.93□□□□□ -1.78
VGFO15240 MIR526A1-201ENST00000384897 85 ntBASIC3.93□□□□□ -1.78
VGFO15240 MIR512-1-201ENST00000384913 84 ntBASIC3.93□□□□□ -1.78
VGFO15240 MIR889-201ENST00000401280 79 ntBASIC3.93□□□□□ -1.78
VGFO15240 RNU6-1086P-201ENST00000410930 100 ntBASIC3.93□□□□□ -1.78
VGFO15240 AC104389.3-201ENST00000445629 235 ntBASIC3.93□□□□□ -1.78
VGFO15240 SNORD67.1-201ENST00000516618 108 ntBASIC3.93□□□□□ -1.78
VGFO15240 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.93□□□□□ -1.78
VGFO15240 MIR6817-201ENST00000615588 66 ntBASIC3.93□□□□□ -1.78
VGFO15240 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.93□□□□□ -1.78
VGFO15240 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
VGFO15240 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.92□□□□□ -1.78
VGFO15240 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
VGFO15240 MIR627-201ENST00000384979 97 ntBASIC3.92□□□□□ -1.78
VGFO15240 AL161932.1-201ENST00000437408 146 ntBASIC3.92□□□□□ -1.78
VGFO15240 RNU1-98P-201ENST00000458992 160 ntBASIC3.92□□□□□ -1.78
VGFO15240 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC3.92□□□□□ -1.78
VGFO15240 SCARNA16.3-201ENST00000516595 184 ntBASIC3.92□□□□□ -1.78
VGFO15240 AL513423.1-201ENST00000621695 132 ntBASIC3.92□□□□□ -1.78
VGFO15240 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
VGFO15240 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.92□□□□□ -1.78
VGFO15240 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
VGFO15240 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC3.91□□□□□ -1.78
VGFO15240 SNORD38.2-201ENST00000384470 69 ntBASIC3.91□□□□□ -1.78
VGFO15240 MIR520A-201ENST00000384862 85 ntBASIC3.91□□□□□ -1.78
VGFO15240 RNA5SP508-201ENST00000411327 119 ntBASIC3.91□□□□□ -1.78
VGFO15240 RPL23AP6-201ENST00000446637 472 ntBASIC3.91□□□□□ -1.78
VGFO15240 UQCRHP3-201ENST00000451503 251 ntBASIC3.91□□□□□ -1.78
VGFO15240 AC139453.2-201ENST00000487255 133 ntBASIC3.91□□□□□ -1.78
VGFO15240 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC3.91□□□□□ -1.78
VGFO15240 MIR8055-201ENST00000610739 97 ntBASIC3.91□□□□□ -1.78
VGFO15240 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC3.91□□□□□ -1.78
VGFO15240 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.9□□□□□ -1.78
VGFO15240 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC3.9□□□□□ -1.78
VGFO15240 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.78
VGFO15240 Y_RNA.94-201ENST00000363068 106 ntBASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms