Protein–RNA interactions for Protein: O00303

EIF3F, Eukaryotic translation initiation factor 3 subunit F, humanhuman

Predicted RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3FO00303 AC062037.2-201ENST00000610137 73 ntBASIC1.07□□□□□ -2.24
EIF3FO00303 AC067940.1-201ENST00000458411 300 ntBASIC1.06□□□□□ -2.24
EIF3FO00303 RPS29P24-201ENST00000486345 171 ntBASIC1.06□□□□□ -2.24
EIF3FO00303 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.06□□□□□ -2.24
EIF3FO00303 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.06□□□□□ -2.24
EIF3FO00303 AP000753.3-201ENST00000604083 169 ntBASIC1.06□□□□□ -2.24
EIF3FO00303 Y_RNA.168-201ENST00000363740 102 ntBASIC1.05□□□□□ -2.24
EIF3FO00303 SNORD27-201ENST00000363981 72 ntBASIC1.05□□□□□ -2.24
EIF3FO00303 RNU6-654P-201ENST00000364373 107 ntBASIC1.05□□□□□ -2.24
EIF3FO00303 Y_RNA.238-201ENST00000364441 102 ntBASIC1.05□□□□□ -2.24
EIF3FO00303 RNY4P28-201ENST00000365281 93 ntBASIC1.05□□□□□ -2.24
EIF3FO00303 Y_RNA.494-201ENST00000384432 111 ntBASIC1.05□□□□□ -2.24
EIF3FO00303 RNU4-43P-201ENST00000410628 137 ntBASIC1.05□□□□□ -2.24
EIF3FO00303 RNA5SP255-201ENST00000516370 107 ntBASIC1.05□□□□□ -2.24
EIF3FO00303 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.05□□□□□ -2.24
EIF3FO00303 AL020996.3-201ENST00000606617 222 ntBASIC1.05□□□□□ -2.24
EIF3FO00303 RNU1-36P-201ENST00000365130 165 ntBASIC1.04□□□□□ -2.24
EIF3FO00303 RNU6-1189P-201ENST00000383958 107 ntBASIC1.04□□□□□ -2.24
EIF3FO00303 RNU6-196P-201ENST00000384315 107 ntBASIC1.04□□□□□ -2.24
EIF3FO00303 SNORA2B-201ENST00000384583 137 ntBASIC1.04□□□□□ -2.24
EIF3FO00303 MIR1276-201ENST00000408707 83 ntBASIC1.04□□□□□ -2.24
EIF3FO00303 RNU6-994P-201ENST00000410507 111 ntBASIC1.04□□□□□ -2.24
EIF3FO00303 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC1.04□□□□□ -2.24
EIF3FO00303 AF228730.3-201ENST00000436691 102 ntBASIC1.04□□□□□ -2.24
EIF3FO00303 U7.7-201ENST00000459276 60 ntBASIC1.04□□□□□ -2.24
EIF3FO00303 RNU7-96P-201ENST00000459535 64 ntBASIC1.04□□□□□ -2.24
EIF3FO00303 RPL39P28-201ENST00000465655 155 ntBASIC1.04□□□□□ -2.24
EIF3FO00303 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.04□□□□□ -2.24
EIF3FO00303 SNORD36C-201ENST00000516733 66 ntBASIC1.04□□□□□ -2.24
EIF3FO00303 RNU6-958P-201ENST00000516995 106 ntBASIC1.04□□□□□ -2.24
EIF3FO00303 MIR4744-201ENST00000581563 82 ntBASIC1.04□□□□□ -2.24
EIF3FO00303 MIR4264-201ENST00000583520 66 ntBASIC1.04□□□□□ -2.24
EIF3FO00303 MIR4295-201ENST00000585286 85 ntBASIC1.04□□□□□ -2.24
EIF3FO00303 AC099654.10-201ENST00000640395 161 ntBASIC1.04□□□□□ -2.24
EIF3FO00303 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
EIF3FO00303 Y_RNA.193-201ENST00000363979 102 ntBASIC1.03□□□□□ -2.24
EIF3FO00303 RNU6-702P-201ENST00000364982 107 ntBASIC1.03□□□□□ -2.24
EIF3FO00303 Y_RNA.542-201ENST00000384641 111 ntBASIC1.03□□□□□ -2.24
EIF3FO00303 RPS3AP1-201ENST00000413190 320 ntBASIC1.03□□□□□ -2.24
EIF3FO00303 AC087343.1-201ENST00000477341 475 ntBASIC1.03□□□□□ -2.24
EIF3FO00303 MTND1P19-201ENST00000511780 315 ntBASIC1.03□□□□□ -2.24
EIF3FO00303 AL136317.1-201ENST00000612653 226 ntBASIC1.03□□□□□ -2.24
EIF3FO00303 AC091895.1-201ENST00000624494 256 ntBASIC1.03□□□□□ -2.24
EIF3FO00303 Y_RNA.121-201ENST00000363309 113 ntBASIC1.02□□□□□ -2.25
EIF3FO00303 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
EIF3FO00303 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
EIF3FO00303 AL035398.1-201ENST00000430869 322 ntBASIC1.02□□□□□ -2.25
EIF3FO00303 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.02□□□□□ -2.25
EIF3FO00303 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.02□□□□□ -2.25
EIF3FO00303 RNU4-71P-201ENST00000516258 113 ntBASIC1.02□□□□□ -2.25
EIF3FO00303 RNU6-1110P-201ENST00000516462 101 ntBASIC1.02□□□□□ -2.25
EIF3FO00303 AL353621.2-201ENST00000605340 133 ntBASIC1.02□□□□□ -2.25
EIF3FO00303 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
EIF3FO00303 Y_RNA.7-201ENST00000362352 102 ntBASIC1.01□□□□□ -2.25
EIF3FO00303 Y_RNA.65-201ENST00000362846 100 ntBASIC1.01□□□□□ -2.25
EIF3FO00303 Y_RNA.269-201ENST00000364685 89 ntBASIC1.01□□□□□ -2.25
EIF3FO00303 RNU6-580P-201ENST00000365159 107 ntBASIC1.01□□□□□ -2.25
EIF3FO00303 Y_RNA.452-201ENST00000384202 108 ntBASIC1.01□□□□□ -2.25
EIF3FO00303 RNU6-1023P-201ENST00000516137 106 ntBASIC1.01□□□□□ -2.25
EIF3FO00303 RNA5SP102-201ENST00000516865 106 ntBASIC1.01□□□□□ -2.25
EIF3FO00303 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.01□□□□□ -2.25
EIF3FO00303 AC025627.3-201ENST00000582078 182 ntBASIC1.01□□□□□ -2.25
EIF3FO00303 AC103810.9-201ENST00000606688 112 ntBASIC1.01□□□□□ -2.25
EIF3FO00303 RNU6-94P-201ENST00000607728 107 ntBASIC1.01□□□□□ -2.25
EIF3FO00303 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.01□□□□□ -2.25
EIF3FO00303 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
EIF3FO00303 Y_RNA.308-201ENST00000365043 101 ntBASIC1□□□□□ -2.25
EIF3FO00303 SNORA25.9-201ENST00000365087 128 ntBASIC1□□□□□ -2.25
EIF3FO00303 Y_RNA.440-201ENST00000384120 114 ntBASIC1□□□□□ -2.25
EIF3FO00303 Y_RNA.477-201ENST00000384352 108 ntBASIC1□□□□□ -2.25
EIF3FO00303 Y_RNA.539-201ENST00000384635 107 ntBASIC1□□□□□ -2.25
EIF3FO00303 MIR499A-201ENST00000384903 122 ntBASIC1□□□□□ -2.25
EIF3FO00303 RNU6-998P-201ENST00000515894 101 ntBASIC1□□□□□ -2.25
EIF3FO00303 Y_RNA.673-201ENST00000516306 88 ntBASIC1□□□□□ -2.25
EIF3FO00303 SNORD114-21-201ENST00000606412 72 ntBASIC1□□□□□ -2.25
EIF3FO00303 MIR6504-201ENST00000613520 61 ntBASIC1□□□□□ -2.25
EIF3FO00303 Y_RNA.23-201ENST00000362496 106 ntBASIC0.99□□□□□ -2.25
EIF3FO00303 Y_RNA.226-201ENST00000364337 114 ntBASIC0.99□□□□□ -2.25
EIF3FO00303 RNU4-38P-201ENST00000364472 129 ntBASIC0.99□□□□□ -2.25
EIF3FO00303 RNU6-125P-201ENST00000384505 107 ntBASIC0.99□□□□□ -2.25
EIF3FO00303 SNORD77.3-201ENST00000391113 65 ntBASIC0.99□□□□□ -2.25
EIF3FO00303 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.99□□□□□ -2.25
EIF3FO00303 RNA5SP95-201ENST00000410319 137 ntBASIC0.99□□□□□ -2.25
EIF3FO00303 RNU2-64P-201ENST00000411315 191 ntBASIC0.99□□□□□ -2.25
EIF3FO00303 AL121914.1-201ENST00000450188 156 ntBASIC0.99□□□□□ -2.25
EIF3FO00303 RNU6-561P-201ENST00000516222 102 ntBASIC0.99□□□□□ -2.25
EIF3FO00303 MIR3128-201ENST00000581957 66 ntBASIC0.99□□□□□ -2.25
EIF3FO00303 MIR4503-201ENST00000582187 83 ntBASIC0.99□□□□□ -2.25
EIF3FO00303 MIR8055-201ENST00000610739 97 ntBASIC0.99□□□□□ -2.25
EIF3FO00303 Z97988.1-201ENST00000637697 135 ntBASIC0.99□□□□□ -2.25
EIF3FO00303 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
EIF3FO00303 RNU6-1292P-201ENST00000383856 107 ntBASIC0.98□□□□□ -2.25
EIF3FO00303 SNORD38B-201ENST00000384690 67 ntBASIC0.98□□□□□ -2.25
EIF3FO00303 RNU6-913P-201ENST00000390913 95 ntBASIC0.98□□□□□ -2.25
EIF3FO00303 RNU6-578P-201ENST00000390980 103 ntBASIC0.98□□□□□ -2.25
EIF3FO00303 RNA5SP247-201ENST00000411181 105 ntBASIC0.98□□□□□ -2.25
EIF3FO00303 Y_RNA.626-201ENST00000411288 95 ntBASIC0.98□□□□□ -2.25
EIF3FO00303 MIR3149-201ENST00000584629 83 ntBASIC0.98□□□□□ -2.25
EIF3FO00303 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.98□□□□□ -2.25
EIF3FO00303 AL365205.2-201ENST00000594586 68 ntBASIC0.98□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 279.6 ms