Protein–RNA interactions for Protein: O00273

DFFA, DNA fragmentation factor subunit alpha, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DFFAO00273 RNU6-929P-201ENST00000384429 107 ntBASIC-0.28□□□□□ -2.45
DFFAO00273 MIR548A2-201ENST00000384956 97 ntBASIC-0.28□□□□□ -2.45
DFFAO00273 RNU6-383P-201ENST00000410864 94 ntBASIC-0.28□□□□□ -2.45
DFFAO00273 RNU2-11P-201ENST00000459191 187 ntBASIC-0.28□□□□□ -2.45
DFFAO00273 RNU6-693P-201ENST00000516134 107 ntBASIC-0.28□□□□□ -2.45
DFFAO00273 SNORD77.4-201ENST00000516158 81 ntBASIC-0.28□□□□□ -2.45
DFFAO00273 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC-0.28□□□□□ -2.45
DFFAO00273 Y_RNA.279-201ENST00000364763 95 ntBASIC-0.29□□□□□ -2.46
DFFAO00273 RNU6-302P-201ENST00000365249 107 ntBASIC-0.29□□□□□ -2.46
DFFAO00273 SNORD24-201ENST00000383884 75 ntBASIC-0.29□□□□□ -2.46
DFFAO00273 RNU6-514P-201ENST00000384208 107 ntBASIC-0.29□□□□□ -2.46
DFFAO00273 Y_RNA.466-201ENST00000384294 113 ntBASIC-0.29□□□□□ -2.46
DFFAO00273 SNORA26-201ENST00000391286 122 ntBASIC-0.29□□□□□ -2.46
DFFAO00273 RNA5SP127-201ENST00000411051 133 ntBASIC-0.29□□□□□ -2.46
DFFAO00273 AL138752.1-201ENST00000452964 351 ntBASIC-0.29□□□□□ -2.46
DFFAO00273 RNU6-998P-201ENST00000515894 101 ntBASIC-0.29□□□□□ -2.46
DFFAO00273 RNU6-559P-201ENST00000516151 98 ntBASIC-0.29□□□□□ -2.46
DFFAO00273 RNU6-191P-201ENST00000516295 94 ntBASIC-0.29□□□□□ -2.46
DFFAO00273 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC-0.29□□□□□ -2.46
DFFAO00273 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC-0.29□□□□□ -2.46
DFFAO00273 MIR6082-201ENST00000613604 109 ntBASIC-0.29□□□□□ -2.46
DFFAO00273 AP001282.2-201ENST00000616149 309 ntBASIC-0.29□□□□□ -2.46
DFFAO00273 Y_RNA.14-201ENST00000362415 103 ntBASIC-0.3□□□□□ -2.46
DFFAO00273 Y_RNA.439-201ENST00000384119 94 ntBASIC-0.3□□□□□ -2.46
DFFAO00273 MIR7-2-201ENST00000384970 110 ntBASIC-0.3□□□□□ -2.46
DFFAO00273 MIR892B-201ENST00000401279 77 ntBASIC-0.3□□□□□ -2.46
DFFAO00273 RNU6-504P-201ENST00000516568 104 ntBASIC-0.3□□□□□ -2.46
DFFAO00273 RNU6-765P-201ENST00000516916 99 ntBASIC-0.3□□□□□ -2.46
DFFAO00273 AL662814.1-201ENST00000617364 121 ntBASIC-0.3□□□□□ -2.46
DFFAO00273 Y_RNA.6-201ENST00000362350 114 ntBASIC-0.31□□□□□ -2.46
DFFAO00273 Y_RNA.7-201ENST00000362352 102 ntBASIC-0.31□□□□□ -2.46
DFFAO00273 RNU6-403P-201ENST00000363163 104 ntBASIC-0.31□□□□□ -2.46
DFFAO00273 Y_RNA.286-201ENST00000364813 102 ntBASIC-0.31□□□□□ -2.46
DFFAO00273 RNU6-1040P-201ENST00000383974 107 ntBASIC-0.31□□□□□ -2.46
DFFAO00273 Y_RNA.428-201ENST00000384078 102 ntBASIC-0.31□□□□□ -2.46
DFFAO00273 Y_RNA.474-201ENST00000384341 102 ntBASIC-0.31□□□□□ -2.46
DFFAO00273 SNORD28-201ENST00000384706 75 ntBASIC-0.31□□□□□ -2.46
DFFAO00273 RNU6-763P-201ENST00000390865 106 ntBASIC-0.31□□□□□ -2.46
DFFAO00273 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.31□□□□□ -2.46
DFFAO00273 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.31□□□□□ -2.46
DFFAO00273 Y_RNA.713-201ENST00000517013 96 ntBASIC-0.31□□□□□ -2.46
DFFAO00273 MIR4639-201ENST00000584938 69 ntBASIC-0.31□□□□□ -2.46
DFFAO00273 RPS29P30-201ENST00000600975 111 ntBASIC-0.31□□□□□ -2.46
DFFAO00273 SNORD113-5-201ENST00000607261 78 ntBASIC-0.31□□□□□ -2.46
DFFAO00273 AC025253.1-201ENST00000613623 543 ntBASIC-0.31□□□□□ -2.46
DFFAO00273 MIR1295B-201ENST00000636144 60 ntBASIC-0.31□□□□□ -2.46
DFFAO00273 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.31□□□□□ -2.46
DFFAO00273 Y_RNA.143-201ENST00000363520 106 ntBASIC-0.32□□□□□ -2.46
DFFAO00273 SNORD81.2-201ENST00000365153 76 ntBASIC-0.32□□□□□ -2.46
DFFAO00273 SNORD61-201ENST00000384252 73 ntBASIC-0.32□□□□□ -2.46
DFFAO00273 Y_RNA.588-201ENST00000391254 102 ntBASIC-0.32□□□□□ -2.46
DFFAO00273 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-0.32□□□□□ -2.46
DFFAO00273 RNA5SP237-201ENST00000410414 113 ntBASIC-0.32□□□□□ -2.46
DFFAO00273 MTND1P34-201ENST00000438556 671 ntBASIC-0.32□□□□□ -2.46
DFFAO00273 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC-0.32□□□□□ -2.46
DFFAO00273 SEPT14P8-201ENST00000508026 178 ntBASIC-0.32□□□□□ -2.46
DFFAO00273 RNU6-782P-201ENST00000516852 104 ntBASIC-0.32□□□□□ -2.46
DFFAO00273 RNU6-1270P-201ENST00000517128 108 ntBASIC-0.32□□□□□ -2.46
DFFAO00273 SNORD116.3-201ENST00000517176 78 ntBASIC-0.32□□□□□ -2.46
DFFAO00273 AC113139.1-201ENST00000605049 239 ntBASIC-0.32□□□□□ -2.46
DFFAO00273 MIR6717-201ENST00000622747 73 ntBASIC-0.32□□□□□ -2.46
DFFAO00273 MIR499B-201ENST00000636498 73 ntBASIC-0.32□□□□□ -2.46
DFFAO00273 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC-0.33□□□□□ -2.46
DFFAO00273 MIR367-201ENST00000362299 68 ntBASIC-0.33□□□□□ -2.46
DFFAO00273 RNU6-888P-201ENST00000363010 101 ntBASIC-0.33□□□□□ -2.46
DFFAO00273 Y_RNA.85-201ENST00000363014 111 ntBASIC-0.33□□□□□ -2.46
DFFAO00273 RNA5SP457-201ENST00000363657 124 ntBASIC-0.33□□□□□ -2.46
DFFAO00273 Y_RNA.160-201ENST00000363677 92 ntBASIC-0.33□□□□□ -2.46
DFFAO00273 Y_RNA.813-201ENST00000364639 102 ntBASIC-0.33□□□□□ -2.46
DFFAO00273 Y_RNA.418-201ENST00000384029 102 ntBASIC-0.33□□□□□ -2.46
DFFAO00273 SNORA26.6-201ENST00000391256 115 ntBASIC-0.33□□□□□ -2.46
DFFAO00273 MTND1P14-201ENST00000427400 950 ntBASIC-0.33□□□□□ -2.46
DFFAO00273 Y_RNA.631-201ENST00000459607 101 ntBASIC-0.33□□□□□ -2.46
DFFAO00273 RPL39P34-201ENST00000477141 156 ntBASIC-0.33□□□□□ -2.46
DFFAO00273 AC013791.1-201ENST00000616619 62 ntBASIC-0.33□□□□□ -2.46
DFFAO00273 AL138825.1-201ENST00000618587 192 ntBASIC-0.33□□□□□ -2.46
DFFAO00273 TUG1_4.1-201ENST00000619464 181 ntBASIC-0.33□□□□□ -2.46
DFFAO00273 AC073869.6-201ENST00000640656 341 ntBASIC-0.33□□□□□ -2.46
DFFAO00273 Y_RNA.222-201ENST00000364264 102 ntBASIC-0.34□□□□□ -2.46
DFFAO00273 Y_RNA.536-201ENST00000384621 113 ntBASIC-0.34□□□□□ -2.46
DFFAO00273 RNU6-291P-201ENST00000384720 107 ntBASIC-0.34□□□□□ -2.46
DFFAO00273 SNORD116-4-201ENST00000384733 96 ntBASIC-0.34□□□□□ -2.46
DFFAO00273 U8.15-201ENST00000390947 134 ntBASIC-0.34□□□□□ -2.46
DFFAO00273 U8.20-201ENST00000459445 131 ntBASIC-0.34□□□□□ -2.46
DFFAO00273 RNU6-126P-201ENST00000516685 103 ntBASIC-0.34□□□□□ -2.46
DFFAO00273 AC100767.1-201ENST00000528178 123 ntBASIC-0.34□□□□□ -2.46
DFFAO00273 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC-0.34□□□□□ -2.46
DFFAO00273 MIR4752-201ENST00000579672 72 ntBASIC-0.34□□□□□ -2.46
DFFAO00273 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.35□□□□□ -2.47
DFFAO00273 RNU6-653P-201ENST00000363074 106 ntBASIC-0.35□□□□□ -2.47
DFFAO00273 Y_RNA.463-201ENST00000384271 102 ntBASIC-0.35□□□□□ -2.47
DFFAO00273 MIR215-201ENST00000384858 110 ntBASIC-0.35□□□□□ -2.47
DFFAO00273 RNU7-159P-201ENST00000459284 62 ntBASIC-0.35□□□□□ -2.47
DFFAO00273 AC104692.1-201ENST00000472406 90 ntBASIC-0.35□□□□□ -2.47
DFFAO00273 Y_RNA.655-201ENST00000515919 96 ntBASIC-0.35□□□□□ -2.47
DFFAO00273 RNU6-764P-201ENST00000516396 105 ntBASIC-0.35□□□□□ -2.47
DFFAO00273 RNU6-365P-201ENST00000517113 106 ntBASIC-0.35□□□□□ -2.47
DFFAO00273 MIR4724-201ENST00000579485 89 ntBASIC-0.35□□□□□ -2.47
DFFAO00273 MIR4491-201ENST00000581087 68 ntBASIC-0.35□□□□□ -2.47
DFFAO00273 RNU1-29P-201ENST00000606574 126 ntBASIC-0.35□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 199.3 ms