Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 Y_RNA.117-201ENST00000363294 101 ntBASIC0.7□□□□□ -2.3
CCDC188H7C350 RNA5SP457-201ENST00000363657 124 ntBASIC0.7□□□□□ -2.3
CCDC188H7C350 Y_RNA.229-201ENST00000364347 113 ntBASIC0.7□□□□□ -2.3
CCDC188H7C350 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.7□□□□□ -2.3
CCDC188H7C350 RNA5SP222-201ENST00000411039 105 ntBASIC0.7□□□□□ -2.3
CCDC188H7C350 RNU7-62P-201ENST00000458856 62 ntBASIC0.7□□□□□ -2.3
CCDC188H7C350 RNU6-1299P-201ENST00000516316 100 ntBASIC0.7□□□□□ -2.3
CCDC188H7C350 RNU6-977P-201ENST00000516411 103 ntBASIC0.7□□□□□ -2.3
CCDC188H7C350 RNU6-635P-201ENST00000516651 102 ntBASIC0.7□□□□□ -2.3
CCDC188H7C350 RNU6-1153P-201ENST00000516760 105 ntBASIC0.7□□□□□ -2.3
CCDC188H7C350 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
CCDC188H7C350 MIR377-201ENST00000362145 69 ntBASIC0.69□□□□□ -2.3
CCDC188H7C350 Y_RNA.11-201ENST00000362375 109 ntBASIC0.69□□□□□ -2.3
CCDC188H7C350 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
CCDC188H7C350 SNORA36.2-201ENST00000384004 127 ntBASIC0.69□□□□□ -2.3
CCDC188H7C350 SNORA27-201ENST00000384323 126 ntBASIC0.69□□□□□ -2.3
CCDC188H7C350 Y_RNA.590-201ENST00000410140 107 ntBASIC0.69□□□□□ -2.3
CCDC188H7C350 SNORD83.1-201ENST00000411362 77 ntBASIC0.69□□□□□ -2.3
CCDC188H7C350 AC006461.1-201ENST00000412637 326 ntBASIC0.69□□□□□ -2.3
CCDC188H7C350 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.69□□□□□ -2.3
CCDC188H7C350 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.69□□□□□ -2.3
CCDC188H7C350 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.69□□□□□ -2.3
CCDC188H7C350 RNU6-504P-201ENST00000516568 104 ntBASIC0.69□□□□□ -2.3
CCDC188H7C350 AC004817.2-201ENST00000561794 651 ntBASIC0.69□□□□□ -2.3
CCDC188H7C350 MIR4771-2-201ENST00000577758 74 ntBASIC0.69□□□□□ -2.3
CCDC188H7C350 MIR5688-201ENST00000580619 83 ntBASIC0.69□□□□□ -2.3
CCDC188H7C350 MIR4771-1-201ENST00000582617 74 ntBASIC0.69□□□□□ -2.3
CCDC188H7C350 AP000942.4-201ENST00000604811 241 ntBASIC0.69□□□□□ -2.3
CCDC188H7C350 Y_RNA.7-201ENST00000362352 102 ntBASIC0.68□□□□□ -2.3
CCDC188H7C350 Y_RNA.37-201ENST00000362606 108 ntBASIC0.68□□□□□ -2.3
CCDC188H7C350 RNU6-238P-201ENST00000363313 106 ntBASIC0.68□□□□□ -2.3
CCDC188H7C350 Y_RNA.199-201ENST00000364014 102 ntBASIC0.68□□□□□ -2.3
CCDC188H7C350 RNU6-934P-201ENST00000365154 107 ntBASIC0.68□□□□□ -2.3
CCDC188H7C350 RNU6-125P-201ENST00000384505 107 ntBASIC0.68□□□□□ -2.3
CCDC188H7C350 Y_RNA.572-201ENST00000384757 98 ntBASIC0.68□□□□□ -2.3
CCDC188H7C350 MIR520F-201ENST00000384824 87 ntBASIC0.68□□□□□ -2.3
CCDC188H7C350 SNORA40.5-201ENST00000391061 128 ntBASIC0.68□□□□□ -2.3
CCDC188H7C350 RNU1-119P-201ENST00000391122 165 ntBASIC0.68□□□□□ -2.3
CCDC188H7C350 RNU6-1132P-201ENST00000459214 107 ntBASIC0.68□□□□□ -2.3
CCDC188H7C350 RNU2-13P-201ENST00000515909 113 ntBASIC0.68□□□□□ -2.3
CCDC188H7C350 MIR342-201ENST00000362212 99 ntBASIC0.67□□□□□ -2.3
CCDC188H7C350 Y_RNA.237-201ENST00000364439 102 ntBASIC0.67□□□□□ -2.3
CCDC188H7C350 SNORD24-201ENST00000383884 75 ntBASIC0.67□□□□□ -2.3
CCDC188H7C350 Y_RNA.432-201ENST00000384087 111 ntBASIC0.67□□□□□ -2.3
CCDC188H7C350 SNORD38B-201ENST00000384690 67 ntBASIC0.67□□□□□ -2.3
CCDC188H7C350 MIR193B-201ENST00000384907 83 ntBASIC0.67□□□□□ -2.3
CCDC188H7C350 MIR518F-201ENST00000384973 87 ntBASIC0.67□□□□□ -2.3
CCDC188H7C350 Y_RNA.622-201ENST00000411091 108 ntBASIC0.67□□□□□ -2.3
CCDC188H7C350 RPS29P24-201ENST00000486345 171 ntBASIC0.67□□□□□ -2.3
CCDC188H7C350 SNORA18.4-201ENST00000516440 124 ntBASIC0.67□□□□□ -2.3
CCDC188H7C350 AC007751.1-201ENST00000529260 376 ntBASIC0.67□□□□□ -2.3
CCDC188H7C350 MIR1273G-201ENST00000577677 100 ntBASIC0.67□□□□□ -2.3
CCDC188H7C350 Z83818.1-201ENST00000603584 150 ntBASIC0.67□□□□□ -2.3
CCDC188H7C350 MIR6513-201ENST00000621188 64 ntBASIC0.67□□□□□ -2.3
CCDC188H7C350 SNORD38B-202ENST00000625943 69 ntBASIC0.67□□□□□ -2.3
CCDC188H7C350 SNORA1.1-201ENST00000364671 133 ntBASIC0.66□□□□□ -2.3
CCDC188H7C350 Y_RNA.422-201ENST00000384054 114 ntBASIC0.66□□□□□ -2.3
CCDC188H7C350 SNORD61-201ENST00000384252 73 ntBASIC0.66□□□□□ -2.3
CCDC188H7C350 Y_RNA.494-201ENST00000384432 111 ntBASIC0.66□□□□□ -2.3
CCDC188H7C350 MIR1302-6-201ENST00000408466 90 ntBASIC0.66□□□□□ -2.3
CCDC188H7C350 COX6CP6-201ENST00000490840 228 ntBASIC0.66□□□□□ -2.3
CCDC188H7C350 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.66□□□□□ -2.3
CCDC188H7C350 MIR4714-201ENST00000580728 77 ntBASIC0.66□□□□□ -2.3
CCDC188H7C350 AC006504.6-201ENST00000590142 199 ntBASIC0.66□□□□□ -2.3
CCDC188H7C350 AL590095.2-201ENST00000604136 117 ntBASIC0.66□□□□□ -2.3
CCDC188H7C350 U2.14-201ENST00000615943 113 ntBASIC0.66□□□□□ -2.3
CCDC188H7C350 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.65□□□□□ -2.31
CCDC188H7C350 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.65□□□□□ -2.31
CCDC188H7C350 SNORD45.3-201ENST00000363836 72 ntBASIC0.65□□□□□ -2.31
CCDC188H7C350 SNORA63C-201ENST00000364578 129 ntBASIC0.65□□□□□ -2.31
CCDC188H7C350 RNU6-740P-201ENST00000364734 105 ntBASIC0.65□□□□□ -2.31
CCDC188H7C350 RNU6-1227P-201ENST00000383981 107 ntBASIC0.65□□□□□ -2.31
CCDC188H7C350 SNORA24-201ENST00000384096 131 ntBASIC0.65□□□□□ -2.31
CCDC188H7C350 Y_RNA.512-201ENST00000384518 102 ntBASIC0.65□□□□□ -2.31
CCDC188H7C350 MIR626-201ENST00000385032 94 ntBASIC0.65□□□□□ -2.31
CCDC188H7C350 MIR520H-201ENST00000385126 88 ntBASIC0.65□□□□□ -2.31
CCDC188H7C350 AC015818.7-201ENST00000428754 109 ntBASIC0.65□□□□□ -2.31
CCDC188H7C350 AC087499.7-201ENST00000441958 109 ntBASIC0.65□□□□□ -2.31
CCDC188H7C350 AL138752.1-201ENST00000452964 351 ntBASIC0.65□□□□□ -2.31
CCDC188H7C350 snoU13.21-201ENST00000459368 105 ntBASIC0.65□□□□□ -2.31
CCDC188H7C350 SNORD36C-201ENST00000516733 66 ntBASIC0.65□□□□□ -2.31
CCDC188H7C350 AC133485.1-201ENST00000567176 124 ntBASIC0.65□□□□□ -2.31
CCDC188H7C350 AC138907.6-201ENST00000568401 126 ntBASIC0.65□□□□□ -2.31
CCDC188H7C350 MIR6835-201ENST00000621552 64 ntBASIC0.65□□□□□ -2.31
CCDC188H7C350 MIR302B-201ENST00000362188 73 ntBASIC0.64□□□□□ -2.31
CCDC188H7C350 RNU6-888P-201ENST00000363010 101 ntBASIC0.64□□□□□ -2.31
CCDC188H7C350 Y_RNA.461-201ENST00000384263 103 ntBASIC0.64□□□□□ -2.31
CCDC188H7C350 RNU6-1109P-201ENST00000391187 107 ntBASIC0.64□□□□□ -2.31
CCDC188H7C350 SNORA79-201ENST00000408376 140 ntBASIC0.64□□□□□ -2.31
CCDC188H7C350 MTCYBP6-201ENST00000441810 138 ntBASIC0.64□□□□□ -2.31
CCDC188H7C350 RNU7-73P-201ENST00000458743 63 ntBASIC0.64□□□□□ -2.31
CCDC188H7C350 MTATP8P1-201ENST00000467115 207 ntBASIC0.64□□□□□ -2.31
CCDC188H7C350 RNA5SP121-201ENST00000516537 101 ntBASIC0.64□□□□□ -2.31
CCDC188H7C350 AP003072.1-201ENST00000531740 145 ntBASIC0.64□□□□□ -2.31
CCDC188H7C350 AC010487.4-201ENST00000637027 61 ntBASIC0.64□□□□□ -2.31
CCDC188H7C350 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.63□□□□□ -2.31
CCDC188H7C350 MIR92A1-201ENST00000385233 78 ntBASIC0.63□□□□□ -2.31
CCDC188H7C350 AC090844.1-201ENST00000422019 156 ntBASIC0.63□□□□□ -2.31
CCDC188H7C350 AC244098.3-201ENST00000424803 96 ntBASIC0.63□□□□□ -2.31
CCDC188H7C350 AP001282.2-201ENST00000616149 309 ntBASIC0.63□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 171.9 ms