Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 RNU6-1270P-201ENST00000517128 108 ntBASIC-0.06□□□□□ -2.42
SMKR1H3BMG3 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC-0.06□□□□□ -2.42
SMKR1H3BMG3 MIR4452-201ENST00000583004 71 ntBASIC-0.06□□□□□ -2.42
SMKR1H3BMG3 MIR1302-2-201ENST00000607096 138 ntBASIC-0.06□□□□□ -2.42
SMKR1H3BMG3 AC006157.1-201ENST00000611750 366 ntBASIC-0.06□□□□□ -2.42
SMKR1H3BMG3 MIR6504-201ENST00000613520 61 ntBASIC-0.06□□□□□ -2.42
SMKR1H3BMG3 Y_RNA.7-201ENST00000362352 102 ntBASIC-0.07□□□□□ -2.42
SMKR1H3BMG3 Y_RNA.445-201ENST00000384168 102 ntBASIC-0.07□□□□□ -2.42
SMKR1H3BMG3 AF228730.3-201ENST00000436691 102 ntBASIC-0.07□□□□□ -2.42
SMKR1H3BMG3 Y_RNA.715-201ENST00000517082 110 ntBASIC-0.07□□□□□ -2.42
SMKR1H3BMG3 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC-0.07□□□□□ -2.42
SMKR1H3BMG3 MIR5688-201ENST00000580619 83 ntBASIC-0.07□□□□□ -2.42
SMKR1H3BMG3 SNORA4-201ENST00000584302 138 ntBASIC-0.07□□□□□ -2.42
SMKR1H3BMG3 AC104408.1-201ENST00000605241 170 ntBASIC-0.07□□□□□ -2.42
SMKR1H3BMG3 RNU6-1272P-201ENST00000362776 107 ntBASIC-0.08□□□□□ -2.42
SMKR1H3BMG3 Y_RNA.410-201ENST00000383992 113 ntBASIC-0.08□□□□□ -2.42
SMKR1H3BMG3 MIR526A2-201ENST00000390198 65 ntBASIC-0.08□□□□□ -2.42
SMKR1H3BMG3 SNORD115-46-201ENST00000390982 71 ntBASIC-0.08□□□□□ -2.42
SMKR1H3BMG3 Y_RNA.617-201ENST00000410920 90 ntBASIC-0.08□□□□□ -2.42
SMKR1H3BMG3 RPL39P25-201ENST00000449384 154 ntBASIC-0.08□□□□□ -2.42
SMKR1H3BMG3 RNU6-397P-201ENST00000516226 104 ntBASIC-0.08□□□□□ -2.42
SMKR1H3BMG3 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC-0.08□□□□□ -2.42
SMKR1H3BMG3 AP003733.2-201ENST00000529409 171 ntBASIC-0.08□□□□□ -2.42
SMKR1H3BMG3 AC104984.5-201ENST00000586878 94 ntBASIC-0.08□□□□□ -2.42
SMKR1H3BMG3 RAC1P9-201ENST00000604990 392 ntBASIC-0.08□□□□□ -2.42
SMKR1H3BMG3 AP001282.2-201ENST00000616149 309 ntBASIC-0.08□□□□□ -2.42
SMKR1H3BMG3 MIR6717-201ENST00000622747 73 ntBASIC-0.08□□□□□ -2.42
SMKR1H3BMG3 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC-0.09□□□□□ -2.42
SMKR1H3BMG3 Y_RNA.183-201ENST00000363882 113 ntBASIC-0.09□□□□□ -2.42
SMKR1H3BMG3 SNORA63.7-201ENST00000365579 123 ntBASIC-0.09□□□□□ -2.42
SMKR1H3BMG3 RNU6-1189P-201ENST00000383958 107 ntBASIC-0.09□□□□□ -2.42
SMKR1H3BMG3 Y_RNA.440-201ENST00000384120 114 ntBASIC-0.09□□□□□ -2.42
SMKR1H3BMG3 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.09□□□□□ -2.42
SMKR1H3BMG3 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC-0.09□□□□□ -2.42
SMKR1H3BMG3 RNA5SP261-201ENST00000410536 106 ntBASIC-0.09□□□□□ -2.42
SMKR1H3BMG3 PMCHL1-202ENST00000423102 261 ntBASIC-0.09□□□□□ -2.42
SMKR1H3BMG3 AL603825.1-201ENST00000438481 80 ntBASIC-0.09□□□□□ -2.42
SMKR1H3BMG3 AC069271.1-201ENST00000445577 156 ntBASIC-0.09□□□□□ -2.42
SMKR1H3BMG3 MTND4LP30-201ENST00000454092 297 ntBASIC-0.09□□□□□ -2.42
SMKR1H3BMG3 Y_RNA.639-201ENST00000458981 102 ntBASIC-0.09□□□□□ -2.42
SMKR1H3BMG3 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-0.09□□□□□ -2.42
SMKR1H3BMG3 MIR6755-201ENST00000619993 66 ntBASIC-0.09□□□□□ -2.42
SMKR1H3BMG3 MIR302B-201ENST00000362188 73 ntBASIC-0.1□□□□□ -2.43
SMKR1H3BMG3 SNORD114-16-201ENST00000363044 70 ntBASIC-0.1□□□□□ -2.43
SMKR1H3BMG3 Y_RNA.174-201ENST00000363781 105 ntBASIC-0.1□□□□□ -2.43
SMKR1H3BMG3 SNORA26.6-201ENST00000391256 115 ntBASIC-0.1□□□□□ -2.43
SMKR1H3BMG3 SNORA26-201ENST00000391286 122 ntBASIC-0.1□□□□□ -2.43
SMKR1H3BMG3 RNA5SP237-201ENST00000410414 113 ntBASIC-0.1□□□□□ -2.43
SMKR1H3BMG3 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.1□□□□□ -2.43
SMKR1H3BMG3 RNU6-135P-201ENST00000516769 101 ntBASIC-0.1□□□□□ -2.43
SMKR1H3BMG3 MIR4290-201ENST00000583807 95 ntBASIC-0.1□□□□□ -2.43
SMKR1H3BMG3 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-0.1□□□□□ -2.43
SMKR1H3BMG3 MIR7107-201ENST00000611489 80 ntBASIC-0.1□□□□□ -2.43
SMKR1H3BMG3 Y_RNA.802-201ENST00000614892 130 ntBASIC-0.1□□□□□ -2.43
SMKR1H3BMG3 AC007485.1-201ENST00000616755 206 ntBASIC-0.1□□□□□ -2.43
SMKR1H3BMG3 AL662814.1-201ENST00000617364 121 ntBASIC-0.1□□□□□ -2.43
SMKR1H3BMG3 uc_338.22-201ENST00000622722 187 ntBASIC-0.1□□□□□ -2.43
SMKR1H3BMG3 MIR6828-201ENST00000636181 60 ntBASIC-0.1□□□□□ -2.43
SMKR1H3BMG3 AC112487.2-201ENST00000637950 304 ntBASIC-0.1□□□□□ -2.43
SMKR1H3BMG3 AL589743.1-201ENST00000551932 2712 ntBASIC-0.1□□□□□ -2.43
SMKR1H3BMG3 MIR342-201ENST00000362212 99 ntBASIC-0.11□□□□□ -2.43
SMKR1H3BMG3 Y_RNA.13-201ENST00000362403 112 ntBASIC-0.11□□□□□ -2.43
SMKR1H3BMG3 Y_RNA.66-201ENST00000362862 102 ntBASIC-0.11□□□□□ -2.43
SMKR1H3BMG3 Y_RNA.390-201ENST00000383932 102 ntBASIC-0.11□□□□□ -2.43
SMKR1H3BMG3 PCNPP3-201ENST00000393579 471 ntBASIC-0.11□□□□□ -2.43
SMKR1H3BMG3 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-0.11□□□□□ -2.43
SMKR1H3BMG3 RBMX2P4-201ENST00000441256 376 ntBASIC-0.11□□□□□ -2.43
SMKR1H3BMG3 RNU6-848P-201ENST00000515948 107 ntBASIC-0.11□□□□□ -2.43
SMKR1H3BMG3 RNU6-617P-201ENST00000516147 107 ntBASIC-0.11□□□□□ -2.43
SMKR1H3BMG3 RNU6-473P-201ENST00000516164 107 ntBASIC-0.11□□□□□ -2.43
SMKR1H3BMG3 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.11□□□□□ -2.43
SMKR1H3BMG3 MIR6082-201ENST00000613604 109 ntBASIC-0.11□□□□□ -2.43
SMKR1H3BMG3 MIR6718-201ENST00000616153 80 ntBASIC-0.11□□□□□ -2.43
SMKR1H3BMG3 AC090574.1-201ENST00000623186 233 ntBASIC-0.11□□□□□ -2.43
SMKR1H3BMG3 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.12□□□□□ -2.43
SMKR1H3BMG3 RNU6-653P-201ENST00000363074 106 ntBASIC-0.12□□□□□ -2.43
SMKR1H3BMG3 RNU6-403P-201ENST00000363163 104 ntBASIC-0.12□□□□□ -2.43
SMKR1H3BMG3 Y_RNA.197-201ENST00000364004 102 ntBASIC-0.12□□□□□ -2.43
SMKR1H3BMG3 Y_RNA.315-201ENST00000365117 102 ntBASIC-0.12□□□□□ -2.43
SMKR1H3BMG3 Y_RNA.505-201ENST00000384489 102 ntBASIC-0.12□□□□□ -2.43
SMKR1H3BMG3 MIR610-201ENST00000385139 96 ntBASIC-0.12□□□□□ -2.43
SMKR1H3BMG3 Y_RNA.581-201ENST00000391017 97 ntBASIC-0.12□□□□□ -2.43
SMKR1H3BMG3 SNORA31.14-201ENST00000516728 116 ntBASIC-0.12□□□□□ -2.43
SMKR1H3BMG3 SCARNA16.5-201ENST00000517114 183 ntBASIC-0.12□□□□□ -2.43
SMKR1H3BMG3 AC006006.1-201ENST00000603082 144 ntBASIC-0.12□□□□□ -2.43
SMKR1H3BMG3 Y_RNA.32-201ENST00000362589 110 ntBASIC-0.13□□□□□ -2.43
SMKR1H3BMG3 Y_RNA.112-201ENST00000363250 102 ntBASIC-0.13□□□□□ -2.43
SMKR1H3BMG3 Y_RNA.154-201ENST00000363624 102 ntBASIC-0.13□□□□□ -2.43
SMKR1H3BMG3 RNU6-1229P-201ENST00000364295 107 ntBASIC-0.13□□□□□ -2.43
SMKR1H3BMG3 RNU4-67P-201ENST00000364569 141 ntBASIC-0.13□□□□□ -2.43
SMKR1H3BMG3 Y_RNA.303-201ENST00000364998 94 ntBASIC-0.13□□□□□ -2.43
SMKR1H3BMG3 RNU6-290P-201ENST00000365212 101 ntBASIC-0.13□□□□□ -2.43
SMKR1H3BMG3 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.13□□□□□ -2.43
SMKR1H3BMG3 RNU6-42P-201ENST00000384165 107 ntBASIC-0.13□□□□□ -2.43
SMKR1H3BMG3 RNU2-55P-201ENST00000411146 174 ntBASIC-0.13□□□□□ -2.43
SMKR1H3BMG3 SUMO1P3-201ENST00000439961 304 ntBASIC-0.13□□□□□ -2.43
SMKR1H3BMG3 RNA5SP436-201ENST00000516020 115 ntBASIC-0.13□□□□□ -2.43
SMKR1H3BMG3 RNU6-507P-201ENST00000516045 100 ntBASIC-0.13□□□□□ -2.43
SMKR1H3BMG3 RNU6-1299P-201ENST00000516316 100 ntBASIC-0.13□□□□□ -2.43
SMKR1H3BMG3 RNU6-765P-201ENST00000516916 99 ntBASIC-0.13□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms