Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
TRIM49D1C9J1S8 PRELID3BP2-201ENST00000605362 201 ntBASIC0.79□□□□□ -2.28
TRIM49D1C9J1S8 BX284668.6-201ENST00000606899 438 ntBASIC0.79□□□□□ -2.28
TRIM49D1C9J1S8 MIR4791-201ENST00000607666 84 ntBASIC0.79□□□□□ -2.28
TRIM49D1C9J1S8 RNU6-94P-201ENST00000607728 107 ntBASIC0.79□□□□□ -2.28
TRIM49D1C9J1S8 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.79□□□□□ -2.28
TRIM49D1C9J1S8 MIR6516-201ENST00000630554 81 ntBASIC0.79□□□□□ -2.28
TRIM49D1C9J1S8 MIR4251-201ENST00000635819 61 ntBASIC0.79□□□□□ -2.28
TRIM49D1C9J1S8 U6.106-201ENST00000636360 105 ntBASIC0.79□□□□□ -2.28
TRIM49D1C9J1S8 MIR103A2-201ENST00000362154 78 ntBASIC0.78□□□□□ -2.28
TRIM49D1C9J1S8 Y_RNA.37-201ENST00000362606 108 ntBASIC0.78□□□□□ -2.28
TRIM49D1C9J1S8 RNA5SP264-201ENST00000363115 107 ntBASIC0.78□□□□□ -2.28
TRIM49D1C9J1S8 Y_RNA.199-201ENST00000364014 102 ntBASIC0.78□□□□□ -2.28
TRIM49D1C9J1S8 Y_RNA.262-201ENST00000364641 102 ntBASIC0.78□□□□□ -2.28
TRIM49D1C9J1S8 SNORA20.1-201ENST00000364790 130 ntBASIC0.78□□□□□ -2.28
TRIM49D1C9J1S8 POLR2J4-204ENST00000418424 324 ntBASIC0.78□□□□□ -2.28
TRIM49D1C9J1S8 AC002429.1-201ENST00000437672 148 ntBASIC0.78□□□□□ -2.28
TRIM49D1C9J1S8 RNU2-13P-201ENST00000515909 113 ntBASIC0.78□□□□□ -2.28
TRIM49D1C9J1S8 RNU6-1219P-201ENST00000516143 112 ntBASIC0.78□□□□□ -2.28
TRIM49D1C9J1S8 RNU6-1271P-201ENST00000517049 105 ntBASIC0.78□□□□□ -2.28
TRIM49D1C9J1S8 AC109810.1-201ENST00000534066 224 ntBASIC0.78□□□□□ -2.28
TRIM49D1C9J1S8 MIR3973-201ENST00000579824 107 ntBASIC0.78□□□□□ -2.28
TRIM49D1C9J1S8 MIR3129-201ENST00000581095 76 ntBASIC0.78□□□□□ -2.28
TRIM49D1C9J1S8 AC087685.1-201ENST00000587507 141 ntBASIC0.78□□□□□ -2.28
TRIM49D1C9J1S8 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.78□□□□□ -2.28
TRIM49D1C9J1S8 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.78□□□□□ -2.28
TRIM49D1C9J1S8 U6.104-201ENST00000637979 90 ntBASIC0.78□□□□□ -2.28
TRIM49D1C9J1S8 MIR411-201ENST00000362239 96 ntBASIC0.77□□□□□ -2.29
TRIM49D1C9J1S8 Y_RNA.182-201ENST00000363880 111 ntBASIC0.77□□□□□ -2.29
TRIM49D1C9J1S8 Y_RNA.241-201ENST00000364470 117 ntBASIC0.77□□□□□ -2.29
TRIM49D1C9J1S8 Y_RNA.432-201ENST00000384087 111 ntBASIC0.77□□□□□ -2.29
TRIM49D1C9J1S8 RNU6-125P-201ENST00000384505 107 ntBASIC0.77□□□□□ -2.29
TRIM49D1C9J1S8 Y_RNA.556-201ENST00000384677 113 ntBASIC0.77□□□□□ -2.29
TRIM49D1C9J1S8 Y_RNA.571-201ENST00000384753 98 ntBASIC0.77□□□□□ -2.29
TRIM49D1C9J1S8 MIR15B-201ENST00000385045 98 ntBASIC0.77□□□□□ -2.29
TRIM49D1C9J1S8 SNORD77.3-201ENST00000391113 65 ntBASIC0.77□□□□□ -2.29
TRIM49D1C9J1S8 AL392103.1-201ENST00000447000 198 ntBASIC0.77□□□□□ -2.29
TRIM49D1C9J1S8 RNU6-830P-201ENST00000516353 107 ntBASIC0.77□□□□□ -2.29
TRIM49D1C9J1S8 MIR6857-201ENST00000613267 93 ntBASIC0.77□□□□□ -2.29
TRIM49D1C9J1S8 MIR342-201ENST00000362212 99 ntBASIC0.76□□□□□ -2.29
TRIM49D1C9J1S8 RNU6-888P-201ENST00000363010 101 ntBASIC0.76□□□□□ -2.29
TRIM49D1C9J1S8 SNORD115-28-201ENST00000363931 81 ntBASIC0.76□□□□□ -2.29
TRIM49D1C9J1S8 RNU6-818P-201ENST00000364837 108 ntBASIC0.76□□□□□ -2.29
TRIM49D1C9J1S8 Y_RNA.370-201ENST00000365589 108 ntBASIC0.76□□□□□ -2.29
TRIM49D1C9J1S8 MIR518E-201ENST00000385252 88 ntBASIC0.76□□□□□ -2.29
TRIM49D1C9J1S8 RNU6-205P-201ENST00000390858 107 ntBASIC0.76□□□□□ -2.29
TRIM49D1C9J1S8 RNU6ATAC23P-201ENST00000408448 123 ntBASIC0.76□□□□□ -2.29
TRIM49D1C9J1S8 RNU2-70P-201ENST00000410718 179 ntBASIC0.76□□□□□ -2.29
TRIM49D1C9J1S8 RNU5E-9P-201ENST00000411164 104 ntBASIC0.76□□□□□ -2.29
TRIM49D1C9J1S8 RNU7-21P-201ENST00000459430 62 ntBASIC0.76□□□□□ -2.29
TRIM49D1C9J1S8 AC074198.2-201ENST00000508153 258 ntBASIC0.76□□□□□ -2.29
TRIM49D1C9J1S8 RNU7-43P-201ENST00000516554 64 ntBASIC0.76□□□□□ -2.29
TRIM49D1C9J1S8 SNORA70.22-201ENST00000517160 124 ntBASIC0.76□□□□□ -2.29
TRIM49D1C9J1S8 MIR4661-201ENST00000582720 75 ntBASIC0.76□□□□□ -2.29
TRIM49D1C9J1S8 SNORA4-201ENST00000584302 138 ntBASIC0.76□□□□□ -2.29
TRIM49D1C9J1S8 AC009779.6-201ENST00000603972 165 ntBASIC0.76□□□□□ -2.29
TRIM49D1C9J1S8 AC211469.2-201ENST00000605461 205 ntBASIC0.76□□□□□ -2.29
TRIM49D1C9J1S8 AL020996.3-201ENST00000606617 222 ntBASIC0.76□□□□□ -2.29
TRIM49D1C9J1S8 AC243994.1-201ENST00000618627 109 ntBASIC0.76□□□□□ -2.29
TRIM49D1C9J1S8 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.76□□□□□ -2.29
TRIM49D1C9J1S8 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
TRIM49D1C9J1S8 RNY1-201ENST00000364228 113 ntBASIC0.75□□□□□ -2.29
TRIM49D1C9J1S8 Y_RNA.355-201ENST00000365462 98 ntBASIC0.75□□□□□ -2.29
TRIM49D1C9J1S8 SNORA51.10-201ENST00000384418 136 ntBASIC0.75□□□□□ -2.29
TRIM49D1C9J1S8 MIR605-201ENST00000385078 83 ntBASIC0.75□□□□□ -2.29
TRIM49D1C9J1S8 RNU6-578P-201ENST00000390980 103 ntBASIC0.75□□□□□ -2.29
TRIM49D1C9J1S8 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.75□□□□□ -2.29
TRIM49D1C9J1S8 AL121914.1-201ENST00000450188 156 ntBASIC0.75□□□□□ -2.29
TRIM49D1C9J1S8 RNU6-1299P-201ENST00000516316 100 ntBASIC0.75□□□□□ -2.29
TRIM49D1C9J1S8 RNU6-958P-201ENST00000516995 106 ntBASIC0.75□□□□□ -2.29
TRIM49D1C9J1S8 Y_RNA.714-201ENST00000517065 90 ntBASIC0.75□□□□□ -2.29
TRIM49D1C9J1S8 AP003484.1-201ENST00000530974 250 ntBASIC0.75□□□□□ -2.29
TRIM49D1C9J1S8 AC097639.2-201ENST00000603159 172 ntBASIC0.75□□□□□ -2.29
TRIM49D1C9J1S8 AL357312.1-201ENST00000603879 298 ntBASIC0.75□□□□□ -2.29
TRIM49D1C9J1S8 AC106800.4-201ENST00000614905 153 ntBASIC0.75□□□□□ -2.29
TRIM49D1C9J1S8 MIR6866-201ENST00000638146 69 ntBASIC0.75□□□□□ -2.29
TRIM49D1C9J1S8 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.75□□□□□ -2.29
TRIM49D1C9J1S8 RNU6-508P-201ENST00000363231 103 ntBASIC0.74□□□□□ -2.29
TRIM49D1C9J1S8 Y_RNA.188-201ENST00000363952 111 ntBASIC0.74□□□□□ -2.29
TRIM49D1C9J1S8 Y_RNA.200-201ENST00000364018 102 ntBASIC0.74□□□□□ -2.29
TRIM49D1C9J1S8 RNU6-978P-201ENST00000364371 103 ntBASIC0.74□□□□□ -2.29
TRIM49D1C9J1S8 RNU1-36P-201ENST00000365130 165 ntBASIC0.74□□□□□ -2.29
TRIM49D1C9J1S8 Y_RNA.508-201ENST00000384502 114 ntBASIC0.74□□□□□ -2.29
TRIM49D1C9J1S8 AC063976.4-201ENST00000421971 163 ntBASIC0.74□□□□□ -2.29
TRIM49D1C9J1S8 RPL39P39-201ENST00000455840 151 ntBASIC0.74□□□□□ -2.29
TRIM49D1C9J1S8 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.74□□□□□ -2.29
TRIM49D1C9J1S8 RNU6-138P-201ENST00000515952 107 ntBASIC0.74□□□□□ -2.29
TRIM49D1C9J1S8 RNU4-71P-201ENST00000516258 113 ntBASIC0.74□□□□□ -2.29
TRIM49D1C9J1S8 RNU6-197P-201ENST00000516680 100 ntBASIC0.74□□□□□ -2.29
TRIM49D1C9J1S8 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC0.74□□□□□ -2.29
TRIM49D1C9J1S8 AC004817.2-201ENST00000561794 651 ntBASIC0.74□□□□□ -2.29
TRIM49D1C9J1S8 MIR4744-201ENST00000581563 82 ntBASIC0.74□□□□□ -2.29
TRIM49D1C9J1S8 AC131055.1-201ENST00000584626 316 ntBASIC0.74□□□□□ -2.29
TRIM49D1C9J1S8 AP000942.4-201ENST00000604811 241 ntBASIC0.74□□□□□ -2.29
TRIM49D1C9J1S8 MIR3658-201ENST00000636291 56 ntBASIC0.74□□□□□ -2.29
TRIM49D1C9J1S8 AC023934.1-201ENST00000574529 2389 ntBASIC0.74□□□□□ -2.29
TRIM49D1C9J1S8 Y_RNA.7-201ENST00000362352 102 ntBASIC0.73□□□□□ -2.29
TRIM49D1C9J1S8 Y_RNA.83-201ENST00000363005 113 ntBASIC0.73□□□□□ -2.29
TRIM49D1C9J1S8 SNORD24-201ENST00000383884 75 ntBASIC0.73□□□□□ -2.29
TRIM49D1C9J1S8 AC244023.1-201ENST00000426884 112 ntBASIC0.73□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 7.9 ms