Protein–RNA interactions for Protein: A6NM62

LRRC53, Leucine-rich repeat-containing protein 53, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC53A6NM62 MIR411-201ENST00000362239 96 ntBASIC1.11□□□□□ -2.23
LRRC53A6NM62 Y_RNA.83-201ENST00000363005 113 ntBASIC1.11□□□□□ -2.23
LRRC53A6NM62 Y_RNA.121-201ENST00000363309 113 ntBASIC1.11□□□□□ -2.23
LRRC53A6NM62 Y_RNA.182-201ENST00000363880 111 ntBASIC1.11□□□□□ -2.23
LRRC53A6NM62 SNORA24-201ENST00000384096 131 ntBASIC1.11□□□□□ -2.23
LRRC53A6NM62 RNU7-90P-201ENST00000459216 62 ntBASIC1.11□□□□□ -2.23
LRRC53A6NM62 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.11□□□□□ -2.23
LRRC53A6NM62 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.11□□□□□ -2.23
LRRC53A6NM62 AC009779.6-201ENST00000603972 165 ntBASIC1.11□□□□□ -2.23
LRRC53A6NM62 AP000942.4-201ENST00000604811 241 ntBASIC1.11□□□□□ -2.23
LRRC53A6NM62 MIR6516-201ENST00000630554 81 ntBASIC1.11□□□□□ -2.23
LRRC53A6NM62 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
LRRC53A6NM62 RNU6-379P-201ENST00000363813 104 ntBASIC1.1□□□□□ -2.23
LRRC53A6NM62 RNU6-654P-201ENST00000364373 107 ntBASIC1.1□□□□□ -2.23
LRRC53A6NM62 SNORA27-201ENST00000384323 126 ntBASIC1.1□□□□□ -2.23
LRRC53A6NM62 RNU4-70P-201ENST00000384579 139 ntBASIC1.1□□□□□ -2.23
LRRC53A6NM62 SNORD77.3-201ENST00000391113 65 ntBASIC1.1□□□□□ -2.23
LRRC53A6NM62 RNU6-918P-201ENST00000391219 106 ntBASIC1.1□□□□□ -2.23
LRRC53A6NM62 RPS23P4-201ENST00000487908 423 ntBASIC1.1□□□□□ -2.23
LRRC53A6NM62 RNU6-958P-201ENST00000516995 106 ntBASIC1.1□□□□□ -2.23
LRRC53A6NM62 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.1□□□□□ -2.23
LRRC53A6NM62 AC130289.1-201ENST00000577321 73 ntBASIC1.1□□□□□ -2.23
LRRC53A6NM62 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
LRRC53A6NM62 RNU6-47P-201ENST00000383866 107 ntBASIC1.09□□□□□ -2.23
LRRC53A6NM62 SNORD124-201ENST00000459577 104 ntBASIC1.09□□□□□ -2.23
LRRC53A6NM62 RNU11-2P-201ENST00000516898 142 ntBASIC1.09□□□□□ -2.23
LRRC53A6NM62 AC023827.1-201ENST00000569247 97 ntBASIC1.09□□□□□ -2.23
LRRC53A6NM62 MIR3129-201ENST00000581095 76 ntBASIC1.09□□□□□ -2.23
LRRC53A6NM62 snoU13.31-201ENST00000607291 104 ntBASIC1.09□□□□□ -2.23
LRRC53A6NM62 MIR376A2-201ENST00000636782 80 ntBASIC1.09□□□□□ -2.23
LRRC53A6NM62 RNU6-1189P-201ENST00000383958 107 ntBASIC1.08□□□□□ -2.24
LRRC53A6NM62 Y_RNA.410-201ENST00000383992 113 ntBASIC1.08□□□□□ -2.24
LRRC53A6NM62 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
LRRC53A6NM62 AL603825.1-201ENST00000438481 80 ntBASIC1.08□□□□□ -2.24
LRRC53A6NM62 snoU13.16-201ENST00000459350 104 ntBASIC1.08□□□□□ -2.24
LRRC53A6NM62 OR2A41P-201ENST00000473586 105 ntBASIC1.08□□□□□ -2.24
LRRC53A6NM62 RPS29P24-201ENST00000486345 171 ntBASIC1.08□□□□□ -2.24
LRRC53A6NM62 MIR4781-201ENST00000585250 76 ntBASIC1.08□□□□□ -2.24
LRRC53A6NM62 MIR4295-201ENST00000585286 85 ntBASIC1.08□□□□□ -2.24
LRRC53A6NM62 AC103810.9-201ENST00000606688 112 ntBASIC1.08□□□□□ -2.24
LRRC53A6NM62 MIR6078-201ENST00000611069 100 ntBASIC1.08□□□□□ -2.24
LRRC53A6NM62 AC078938.1-201ENST00000620993 318 ntBASIC1.08□□□□□ -2.24
LRRC53A6NM62 U6.106-201ENST00000636360 105 ntBASIC1.08□□□□□ -2.24
LRRC53A6NM62 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
LRRC53A6NM62 RNU4-38P-201ENST00000364472 129 ntBASIC1.07□□□□□ -2.24
LRRC53A6NM62 Y_RNA.274-201ENST00000364714 101 ntBASIC1.07□□□□□ -2.24
LRRC53A6NM62 RNU6-275P-201ENST00000364910 107 ntBASIC1.07□□□□□ -2.24
LRRC53A6NM62 Y_RNA.412-201ENST00000384001 104 ntBASIC1.07□□□□□ -2.24
LRRC53A6NM62 Y_RNA.440-201ENST00000384120 114 ntBASIC1.07□□□□□ -2.24
LRRC53A6NM62 MT-TG-201ENST00000387429 68 ntBASIC1.07□□□□□ -2.24
LRRC53A6NM62 RNU6-913P-201ENST00000390913 95 ntBASIC1.07□□□□□ -2.24
LRRC53A6NM62 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.07□□□□□ -2.24
LRRC53A6NM62 RNA5SP95-201ENST00000410319 137 ntBASIC1.07□□□□□ -2.24
LRRC53A6NM62 MRPL35P3-201ENST00000421557 364 ntBASIC1.07□□□□□ -2.24
LRRC53A6NM62 AC090844.1-201ENST00000422019 156 ntBASIC1.07□□□□□ -2.24
LRRC53A6NM62 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.07□□□□□ -2.24
LRRC53A6NM62 AL138752.1-201ENST00000452964 351 ntBASIC1.07□□□□□ -2.24
LRRC53A6NM62 AC108729.3-201ENST00000513484 108 ntBASIC1.07□□□□□ -2.24
LRRC53A6NM62 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.07□□□□□ -2.24
LRRC53A6NM62 MIR378D2-201ENST00000580636 98 ntBASIC1.07□□□□□ -2.24
LRRC53A6NM62 AC131055.1-201ENST00000584626 316 ntBASIC1.07□□□□□ -2.24
LRRC53A6NM62 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.06□□□□□ -2.24
LRRC53A6NM62 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.06□□□□□ -2.24
LRRC53A6NM62 RNU6-396P-201ENST00000365369 105 ntBASIC1.06□□□□□ -2.24
LRRC53A6NM62 MIR2115-201ENST00000516657 100 ntBASIC1.06□□□□□ -2.24
LRRC53A6NM62 RNU6-388P-201ENST00000517012 105 ntBASIC1.06□□□□□ -2.24
LRRC53A6NM62 RNU6-389P-201ENST00000517048 105 ntBASIC1.06□□□□□ -2.24
LRRC53A6NM62 AC036111.3-201ENST00000526389 112 ntBASIC1.06□□□□□ -2.24
LRRC53A6NM62 MIR4498-201ENST00000577599 66 ntBASIC1.06□□□□□ -2.24
LRRC53A6NM62 Z83818.1-201ENST00000603584 150 ntBASIC1.06□□□□□ -2.24
LRRC53A6NM62 AC141273.2-201ENST00000618989 130 ntBASIC1.06□□□□□ -2.24
LRRC53A6NM62 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.05□□□□□ -2.24
LRRC53A6NM62 Y_RNA.75-201ENST00000362927 97 ntBASIC1.05□□□□□ -2.24
LRRC53A6NM62 RNU6-1020P-201ENST00000363684 107 ntBASIC1.05□□□□□ -2.24
LRRC53A6NM62 RNU6-978P-201ENST00000364371 103 ntBASIC1.05□□□□□ -2.24
LRRC53A6NM62 Y_RNA.338-201ENST00000365320 114 ntBASIC1.05□□□□□ -2.24
LRRC53A6NM62 RNU6-643P-201ENST00000384018 107 ntBASIC1.05□□□□□ -2.24
LRRC53A6NM62 RNU6-125P-201ENST00000384505 107 ntBASIC1.05□□□□□ -2.24
LRRC53A6NM62 RNU6-613P-201ENST00000410412 108 ntBASIC1.05□□□□□ -2.24
LRRC53A6NM62 RNU7-73P-201ENST00000458743 63 ntBASIC1.05□□□□□ -2.24
LRRC53A6NM62 AC087343.1-201ENST00000477341 475 ntBASIC1.05□□□□□ -2.24
LRRC53A6NM62 SNORD116-25-201ENST00000516517 92 ntBASIC1.05□□□□□ -2.24
LRRC53A6NM62 AC012676.2-201ENST00000619258 186 ntBASIC1.05□□□□□ -2.24
LRRC53A6NM62 MIR342-201ENST00000362212 99 ntBASIC1.04□□□□□ -2.24
LRRC53A6NM62 SNORA22-201ENST00000383907 134 ntBASIC1.04□□□□□ -2.24
LRRC53A6NM62 Y_RNA.435-201ENST00000384095 112 ntBASIC1.04□□□□□ -2.24
LRRC53A6NM62 Y_RNA.476-201ENST00000384347 108 ntBASIC1.04□□□□□ -2.24
LRRC53A6NM62 SNORA22C-201ENST00000384614 134 ntBASIC1.04□□□□□ -2.24
LRRC53A6NM62 Y_RNA.542-201ENST00000384641 111 ntBASIC1.04□□□□□ -2.24
LRRC53A6NM62 RNU6ATAC23P-201ENST00000408448 123 ntBASIC1.04□□□□□ -2.24
LRRC53A6NM62 AL035398.1-201ENST00000430869 322 ntBASIC1.04□□□□□ -2.24
LRRC53A6NM62 RNU6-998P-201ENST00000515894 101 ntBASIC1.04□□□□□ -2.24
LRRC53A6NM62 AC022559.1-201ENST00000520905 205 ntBASIC1.04□□□□□ -2.24
LRRC53A6NM62 AL365205.2-201ENST00000594586 68 ntBASIC1.04□□□□□ -2.24
LRRC53A6NM62 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
LRRC53A6NM62 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
LRRC53A6NM62 RNU6-53P-201ENST00000365367 106 ntBASIC1.03□□□□□ -2.24
LRRC53A6NM62 Y_RNA.515-201ENST00000384535 112 ntBASIC1.03□□□□□ -2.24
LRRC53A6NM62 HMGN1P33-201ENST00000432945 451 ntBASIC1.03□□□□□ -2.24
LRRC53A6NM62 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms