Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 AL593851.1-201ENST00000426171 157 ntBASIC-1.39□□□□□ -2.63
HLA-DRB4X5D2U9 RNA5SP33-201ENST00000516687 98 ntBASIC-1.39□□□□□ -2.63
HLA-DRB4X5D2U9 RNU7-188P-201ENST00000517063 64 ntBASIC-1.39□□□□□ -2.63
HLA-DRB4X5D2U9 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-1.39□□□□□ -2.63
HLA-DRB4X5D2U9 AC018638.8-201ENST00000588755 281 ntBASIC-1.39□□□□□ -2.63
HLA-DRB4X5D2U9 AL356055.1-201ENST00000602528 446 ntBASIC-1.39□□□□□ -2.63
HLA-DRB4X5D2U9 Y_RNA.133-201ENST00000363428 110 ntBASIC-1.4□□□□□ -2.63
HLA-DRB4X5D2U9 SNORD77.3-201ENST00000391113 65 ntBASIC-1.4□□□□□ -2.63
HLA-DRB4X5D2U9 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC-1.4□□□□□ -2.63
HLA-DRB4X5D2U9 AL009048.1-201ENST00000450437 298 ntBASIC-1.4□□□□□ -2.63
HLA-DRB4X5D2U9 RNU7-87P-201ENST00000459343 62 ntBASIC-1.4□□□□□ -2.63
HLA-DRB4X5D2U9 RNU6-408P-201ENST00000515910 100 ntBASIC-1.4□□□□□ -2.63
HLA-DRB4X5D2U9 AC127455.1-201ENST00000565496 145 ntBASIC-1.4□□□□□ -2.63
HLA-DRB4X5D2U9 AC055872.1-201ENST00000570978 278 ntBASIC-1.4□□□□□ -2.63
HLA-DRB4X5D2U9 MIR4280-201ENST00000582178 76 ntBASIC-1.4□□□□□ -2.63
HLA-DRB4X5D2U9 RNA5SP403-201ENST00000363598 108 ntBASIC-1.41□□□□□ -2.64
HLA-DRB4X5D2U9 SNORD115-28-201ENST00000363931 81 ntBASIC-1.41□□□□□ -2.64
HLA-DRB4X5D2U9 Y_RNA.201-201ENST00000364052 96 ntBASIC-1.41□□□□□ -2.64
HLA-DRB4X5D2U9 Y_RNA.381-201ENST00000365666 102 ntBASIC-1.41□□□□□ -2.64
HLA-DRB4X5D2U9 RNU4-55P-201ENST00000410731 137 ntBASIC-1.41□□□□□ -2.64
HLA-DRB4X5D2U9 AL445193.1-201ENST00000441183 141 ntBASIC-1.41□□□□□ -2.64
HLA-DRB4X5D2U9 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC-1.41□□□□□ -2.64
HLA-DRB4X5D2U9 RNA5SP461-201ENST00000516451 104 ntBASIC-1.41□□□□□ -2.64
HLA-DRB4X5D2U9 MRPS18CP4-201ENST00000535821 231 ntBASIC-1.41□□□□□ -2.64
HLA-DRB4X5D2U9 RNU6-653P-201ENST00000363074 106 ntBASIC-1.42□□□□□ -2.64
HLA-DRB4X5D2U9 Y_RNA.101-201ENST00000363154 102 ntBASIC-1.42□□□□□ -2.64
HLA-DRB4X5D2U9 RNU6-702P-201ENST00000364982 107 ntBASIC-1.42□□□□□ -2.64
HLA-DRB4X5D2U9 RNU6-596P-201ENST00000365395 98 ntBASIC-1.42□□□□□ -2.64
HLA-DRB4X5D2U9 RNU6-949P-201ENST00000384040 107 ntBASIC-1.42□□□□□ -2.64
HLA-DRB4X5D2U9 Y_RNA.452-201ENST00000384202 108 ntBASIC-1.42□□□□□ -2.64
HLA-DRB4X5D2U9 SNORD12B-201ENST00000410433 91 ntBASIC-1.42□□□□□ -2.64
HLA-DRB4X5D2U9 SNORD11-201ENST00000459124 84 ntBASIC-1.42□□□□□ -2.64
HLA-DRB4X5D2U9 AC083904.1-201ENST00000487828 231 ntBASIC-1.42□□□□□ -2.64
HLA-DRB4X5D2U9 RNU6-436P-201ENST00000516171 114 ntBASIC-1.42□□□□□ -2.64
HLA-DRB4X5D2U9 AC026421.1-201ENST00000519101 163 ntBASIC-1.42□□□□□ -2.64
HLA-DRB4X5D2U9 RNU6-86P-201ENST00000606534 107 ntBASIC-1.42□□□□□ -2.64
HLA-DRB4X5D2U9 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC-1.42□□□□□ -2.64
HLA-DRB4X5D2U9 RNU6-865P-201ENST00000364772 107 ntBASIC-1.43□□□□□ -2.64
HLA-DRB4X5D2U9 RNU6-431P-201ENST00000383874 107 ntBASIC-1.43□□□□□ -2.64
HLA-DRB4X5D2U9 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.43□□□□□ -2.64
HLA-DRB4X5D2U9 MIR1278-201ENST00000408753 81 ntBASIC-1.43□□□□□ -2.64
HLA-DRB4X5D2U9 RNU6-710P-201ENST00000410424 105 ntBASIC-1.43□□□□□ -2.64
HLA-DRB4X5D2U9 RNU6-938P-201ENST00000411285 103 ntBASIC-1.43□□□□□ -2.64
HLA-DRB4X5D2U9 MTND2P14-201ENST00000482139 351 ntBASIC-1.43□□□□□ -2.64
HLA-DRB4X5D2U9 MIR6717-201ENST00000622747 73 ntBASIC-1.43□□□□□ -2.64
HLA-DRB4X5D2U9 Y_RNA.6-201ENST00000362350 114 ntBASIC-1.44□□□□□ -2.64
HLA-DRB4X5D2U9 Y_RNA.150-201ENST00000363562 102 ntBASIC-1.44□□□□□ -2.64
HLA-DRB4X5D2U9 RNU6-597P-201ENST00000365620 102 ntBASIC-1.44□□□□□ -2.64
HLA-DRB4X5D2U9 SNORD56B-201ENST00000384713 71 ntBASIC-1.44□□□□□ -2.64
HLA-DRB4X5D2U9 RNA5SP261-201ENST00000410536 106 ntBASIC-1.44□□□□□ -2.64
HLA-DRB4X5D2U9 SNORA13-201ENST00000458790 133 ntBASIC-1.44□□□□□ -2.64
HLA-DRB4X5D2U9 RNU7-96P-201ENST00000459535 64 ntBASIC-1.44□□□□□ -2.64
HLA-DRB4X5D2U9 RNU7-115P-201ENST00000516433 55 ntBASIC-1.44□□□□□ -2.64
HLA-DRB4X5D2U9 SNORD38.3-201ENST00000516599 73 ntBASIC-1.44□□□□□ -2.64
HLA-DRB4X5D2U9 DEFB131E-201ENST00000532329 154 ntBASIC-1.44□□□□□ -2.64
HLA-DRB4X5D2U9 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC-1.44□□□□□ -2.64
HLA-DRB4X5D2U9 MIR6851-201ENST00000617060 67 ntBASIC-1.44□□□□□ -2.64
HLA-DRB4X5D2U9 RNU6-502P-201ENST00000362419 108 ntBASIC-1.45□□□□□ -2.64
HLA-DRB4X5D2U9 RNU4-58P-201ENST00000363192 141 ntBASIC-1.45□□□□□ -2.64
HLA-DRB4X5D2U9 Y_RNA.341-201ENST00000365341 102 ntBASIC-1.45□□□□□ -2.64
HLA-DRB4X5D2U9 SNORD115-44-201ENST00000365391 82 ntBASIC-1.45□□□□□ -2.64
HLA-DRB4X5D2U9 MIR9-2-201ENST00000384838 87 ntBASIC-1.45□□□□□ -2.64
HLA-DRB4X5D2U9 MIR514A2-201ENST00000385131 88 ntBASIC-1.45□□□□□ -2.64
HLA-DRB4X5D2U9 MIR514A3-201ENST00000385132 88 ntBASIC-1.45□□□□□ -2.64
HLA-DRB4X5D2U9 SNORD64-201ENST00000386683 67 ntBASIC-1.45□□□□□ -2.64
HLA-DRB4X5D2U9 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC-1.45□□□□□ -2.64
HLA-DRB4X5D2U9 MTND3P16-201ENST00000452205 344 ntBASIC-1.45□□□□□ -2.64
HLA-DRB4X5D2U9 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-1.45□□□□□ -2.64
HLA-DRB4X5D2U9 Y_RNA.637-201ENST00000459424 114 ntBASIC-1.45□□□□□ -2.64
HLA-DRB4X5D2U9 RNU6-155P-201ENST00000516347 100 ntBASIC-1.45□□□□□ -2.64
HLA-DRB4X5D2U9 RNU6-531P-201ENST00000516694 104 ntBASIC-1.45□□□□□ -2.64
HLA-DRB4X5D2U9 OSBPL9P5-201ENST00000542581 171 ntBASIC-1.45□□□□□ -2.64
HLA-DRB4X5D2U9 AC138207.3-201ENST00000585289 166 ntBASIC-1.45□□□□□ -2.64
HLA-DRB4X5D2U9 AC060780.3-201ENST00000589464 80 ntBASIC-1.45□□□□□ -2.64
HLA-DRB4X5D2U9 MIR382-201ENST00000637119 76 ntBASIC-1.45□□□□□ -2.64
HLA-DRB4X5D2U9 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.45□□□□□ -2.64
HLA-DRB4X5D2U9 FGF7P2-201ENST00000332473 296 ntBASIC-1.46□□□□□ -2.64
HLA-DRB4X5D2U9 Y_RNA.7-201ENST00000362352 102 ntBASIC-1.46□□□□□ -2.64
HLA-DRB4X5D2U9 Y_RNA.37-201ENST00000362606 108 ntBASIC-1.46□□□□□ -2.64
HLA-DRB4X5D2U9 RNU6-961P-201ENST00000363893 105 ntBASIC-1.46□□□□□ -2.64
HLA-DRB4X5D2U9 RNU6-522P-201ENST00000364497 107 ntBASIC-1.46□□□□□ -2.64
HLA-DRB4X5D2U9 Y_RNA.310-201ENST00000365063 113 ntBASIC-1.46□□□□□ -2.64
HLA-DRB4X5D2U9 Y_RNA.560-201ENST00000384689 102 ntBASIC-1.46□□□□□ -2.64
HLA-DRB4X5D2U9 SNORA26.6-201ENST00000391256 115 ntBASIC-1.46□□□□□ -2.64
HLA-DRB4X5D2U9 RNU6-998P-201ENST00000515894 101 ntBASIC-1.46□□□□□ -2.64
HLA-DRB4X5D2U9 MIR548AY-201ENST00000617669 107 ntBASIC-1.46□□□□□ -2.64
HLA-DRB4X5D2U9 AC091931.1-201ENST00000623488 728 ntBASIC-1.46□□□□□ -2.64
HLA-DRB4X5D2U9 MTND5P18-201ENST00000445624 1801 ntBASIC-1.46□□□□□ -2.64
HLA-DRB4X5D2U9 Y_RNA.283-201ENST00000364798 112 ntBASIC-1.47□□□□□ -2.64
HLA-DRB4X5D2U9 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.47□□□□□ -2.64
HLA-DRB4X5D2U9 RNU6-901P-201ENST00000384593 106 ntBASIC-1.47□□□□□ -2.64
HLA-DRB4X5D2U9 AL353193.1-201ENST00000421444 268 ntBASIC-1.47□□□□□ -2.64
HLA-DRB4X5D2U9 MIR5701-3-201ENST00000578890 82 ntBASIC-1.47□□□□□ -2.64
HLA-DRB4X5D2U9 MIR5701-1-201ENST00000585138 82 ntBASIC-1.47□□□□□ -2.64
HLA-DRB4X5D2U9 MIR5701-2-201ENST00000615634 82 ntBASIC-1.47□□□□□ -2.64
HLA-DRB4X5D2U9 AC007494.3-201ENST00000624660 743 ntBASIC-1.47□□□□□ -2.64
HLA-DRB4X5D2U9 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.48□□□□□ -2.65
HLA-DRB4X5D2U9 Y_RNA.52-201ENST00000362760 96 ntBASIC-1.48□□□□□ -2.65
HLA-DRB4X5D2U9 Y_RNA.56-201ENST00000362798 112 ntBASIC-1.48□□□□□ -2.65
HLA-DRB4X5D2U9 RNU4-50P-201ENST00000364361 141 ntBASIC-1.48□□□□□ -2.65
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms