Protein–RNA interactions for Protein: Q9Y6K1

DNMT3A, DNA (cytosine-5)-methyltransferase 3A, humanhuman

Predicted RBP Predictions only

Length 912 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3AQ9Y6K1 RNU6-977P-201ENST00000516411 103 ntBASIC3.15□□□□□ -1.91
DNMT3AQ9Y6K1 RNU6-56P-201ENST00000516986 93 ntBASIC3.15□□□□□ -1.91
DNMT3AQ9Y6K1 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC3.15□□□□□ -1.91
DNMT3AQ9Y6K1 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
DNMT3AQ9Y6K1 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
DNMT3AQ9Y6K1 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
DNMT3AQ9Y6K1 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
DNMT3AQ9Y6K1 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.14□□□□□ -1.91
DNMT3AQ9Y6K1 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
DNMT3AQ9Y6K1 SNORA25.9-201ENST00000365087 128 ntBASIC3.14□□□□□ -1.91
DNMT3AQ9Y6K1 RNU1-148P-201ENST00000384472 162 ntBASIC3.14□□□□□ -1.91
DNMT3AQ9Y6K1 RNU6-1319P-201ENST00000390855 104 ntBASIC3.14□□□□□ -1.91
DNMT3AQ9Y6K1 RNU6-747P-201ENST00000390928 104 ntBASIC3.14□□□□□ -1.91
DNMT3AQ9Y6K1 RNU6-241P-201ENST00000391148 104 ntBASIC3.14□□□□□ -1.91
DNMT3AQ9Y6K1 RNU6-630P-201ENST00000391258 106 ntBASIC3.14□□□□□ -1.91
DNMT3AQ9Y6K1 RNU6-177P-201ENST00000411257 104 ntBASIC3.14□□□□□ -1.91
DNMT3AQ9Y6K1 AC245047.3-201ENST00000429428 127 ntBASIC3.14□□□□□ -1.91
DNMT3AQ9Y6K1 FAM106DP-201ENST00000586416 501 ntBASIC3.14□□□□□ -1.91
DNMT3AQ9Y6K1 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.14□□□□□ -1.91
DNMT3AQ9Y6K1 AC012676.2-201ENST00000619258 186 ntBASIC3.14□□□□□ -1.91
DNMT3AQ9Y6K1 MIR1297-201ENST00000637311 77 ntBASIC3.14□□□□□ -1.91
DNMT3AQ9Y6K1 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
DNMT3AQ9Y6K1 RNU6-1019P-201ENST00000364424 107 ntBASIC3.13□□□□□ -1.91
DNMT3AQ9Y6K1 SNORA7.4-201ENST00000384249 137 ntBASIC3.13□□□□□ -1.91
DNMT3AQ9Y6K1 SNORA2B-201ENST00000384583 137 ntBASIC3.13□□□□□ -1.91
DNMT3AQ9Y6K1 RNU6ATAC41P-201ENST00000408600 126 ntBASIC3.13□□□□□ -1.91
DNMT3AQ9Y6K1 AC092628.1-201ENST00000436250 252 ntBASIC3.13□□□□□ -1.91
DNMT3AQ9Y6K1 BX510359.1-201ENST00000456973 237 ntBASIC3.13□□□□□ -1.91
DNMT3AQ9Y6K1 RN7SL863P-201ENST00000462370 296 ntBASIC3.13□□□□□ -1.91
DNMT3AQ9Y6K1 MIR3651-201ENST00000630427 90 ntBASIC3.13□□□□□ -1.91
DNMT3AQ9Y6K1 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.13□□□□□ -1.91
DNMT3AQ9Y6K1 MAPK10-266ENST00000641066 6555 ntBASIC3.13□□□□□ -1.91
DNMT3AQ9Y6K1 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.13□□□□□ -1.91
DNMT3AQ9Y6K1 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
DNMT3AQ9Y6K1 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
DNMT3AQ9Y6K1 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
DNMT3AQ9Y6K1 RNA5SP133-201ENST00000363368 119 ntBASIC3.12□□□□□ -1.91
DNMT3AQ9Y6K1 Y_RNA.448-201ENST00000384185 108 ntBASIC3.12□□□□□ -1.91
DNMT3AQ9Y6K1 MIR483-201ENST00000385070 76 ntBASIC3.12□□□□□ -1.91
DNMT3AQ9Y6K1 MIR520H-201ENST00000385126 88 ntBASIC3.12□□□□□ -1.91
DNMT3AQ9Y6K1 AC115115.1-201ENST00000449927 248 ntBASIC3.12□□□□□ -1.91
DNMT3AQ9Y6K1 AL161756.2-201ENST00000604597 246 ntBASIC3.12□□□□□ -1.91
DNMT3AQ9Y6K1 uc_338.25-201ENST00000613756 156 ntBASIC3.12□□□□□ -1.91
DNMT3AQ9Y6K1 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.12□□□□□ -1.91
DNMT3AQ9Y6K1 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.12□□□□□ -1.91
DNMT3AQ9Y6K1 RNU6-865P-201ENST00000364772 107 ntBASIC3.11□□□□□ -1.91
DNMT3AQ9Y6K1 RNA5SP138-201ENST00000365098 114 ntBASIC3.11□□□□□ -1.91
DNMT3AQ9Y6K1 RNU6-480P-201ENST00000384332 107 ntBASIC3.11□□□□□ -1.91
DNMT3AQ9Y6K1 SNORD15B-201ENST00000384714 146 ntBASIC3.11□□□□□ -1.91
DNMT3AQ9Y6K1 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC3.11□□□□□ -1.91
DNMT3AQ9Y6K1 RNU7-85P-201ENST00000458851 63 ntBASIC3.11□□□□□ -1.91
DNMT3AQ9Y6K1 RPPH1-2P-201ENST00000516688 293 ntBASIC3.11□□□□□ -1.91
DNMT3AQ9Y6K1 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.11□□□□□ -1.91
DNMT3AQ9Y6K1 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.11□□□□□ -1.91
DNMT3AQ9Y6K1 SNORA28-201ENST00000606769 126 ntBASIC3.11□□□□□ -1.91
DNMT3AQ9Y6K1 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC3.11□□□□□ -1.91
DNMT3AQ9Y6K1 MIR8057-201ENST00000620957 69 ntBASIC3.11□□□□□ -1.91
DNMT3AQ9Y6K1 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.11□□□□□ -1.91
DNMT3AQ9Y6K1 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.1□□□□□ -1.91
DNMT3AQ9Y6K1 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
DNMT3AQ9Y6K1 RNA5SP383-201ENST00000362934 120 ntBASIC3.1□□□□□ -1.91
DNMT3AQ9Y6K1 AC074348.1-201ENST00000426503 132 ntBASIC3.1□□□□□ -1.91
DNMT3AQ9Y6K1 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.1□□□□□ -1.91
DNMT3AQ9Y6K1 RN7SL504P-201ENST00000494496 287 ntBASIC3.1□□□□□ -1.91
DNMT3AQ9Y6K1 RNA5SP217-201ENST00000515959 91 ntBASIC3.1□□□□□ -1.91
DNMT3AQ9Y6K1 SNORA70.24-201ENST00000517233 118 ntBASIC3.1□□□□□ -1.91
DNMT3AQ9Y6K1 AC104027.1-201ENST00000521887 300 ntBASIC3.1□□□□□ -1.91
DNMT3AQ9Y6K1 AC022202.1-201ENST00000613515 211 ntBASIC3.1□□□□□ -1.91
DNMT3AQ9Y6K1 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC3.1□□□□□ -1.91
DNMT3AQ9Y6K1 AC022513.1-201ENST00000624512 117 ntBASIC3.1□□□□□ -1.91
DNMT3AQ9Y6K1 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
DNMT3AQ9Y6K1 SNORA25.4-201ENST00000363666 124 ntBASIC3.09□□□□□ -1.91
DNMT3AQ9Y6K1 SNORA25.6-201ENST00000364121 118 ntBASIC3.09□□□□□ -1.91
DNMT3AQ9Y6K1 Y_RNA.236-201ENST00000364427 111 ntBASIC3.09□□□□□ -1.91
DNMT3AQ9Y6K1 RNU6-950P-201ENST00000384651 107 ntBASIC3.09□□□□□ -1.91
DNMT3AQ9Y6K1 RNA5SP292-201ENST00000390974 118 ntBASIC3.09□□□□□ -1.91
DNMT3AQ9Y6K1 SNORD77.2-201ENST00000391045 68 ntBASIC3.09□□□□□ -1.91
DNMT3AQ9Y6K1 RNA5SP465-201ENST00000391195 109 ntBASIC3.09□□□□□ -1.91
DNMT3AQ9Y6K1 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC3.09□□□□□ -1.91
DNMT3AQ9Y6K1 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.09□□□□□ -1.91
DNMT3AQ9Y6K1 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.09□□□□□ -1.91
DNMT3AQ9Y6K1 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
DNMT3AQ9Y6K1 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
DNMT3AQ9Y6K1 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
DNMT3AQ9Y6K1 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
DNMT3AQ9Y6K1 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC3.08□□□□□ -1.92
DNMT3AQ9Y6K1 SNORD115-34-201ENST00000362441 82 ntBASIC3.08□□□□□ -1.92
DNMT3AQ9Y6K1 SNORD115-12-201ENST00000362583 82 ntBASIC3.08□□□□□ -1.92
DNMT3AQ9Y6K1 SNORD115-29-201ENST00000362834 82 ntBASIC3.08□□□□□ -1.92
DNMT3AQ9Y6K1 SNORD115-9-201ENST00000362912 82 ntBASIC3.08□□□□□ -1.92
DNMT3AQ9Y6K1 SNORD115-21-201ENST00000362963 81 ntBASIC3.08□□□□□ -1.92
DNMT3AQ9Y6K1 SNORD115-41-201ENST00000363608 82 ntBASIC3.08□□□□□ -1.92
DNMT3AQ9Y6K1 SNORD115-11-201ENST00000363616 82 ntBASIC3.08□□□□□ -1.92
DNMT3AQ9Y6K1 SNORD115-5-201ENST00000363633 82 ntBASIC3.08□□□□□ -1.92
DNMT3AQ9Y6K1 SNORD115-4-201ENST00000363810 82 ntBASIC3.08□□□□□ -1.92
DNMT3AQ9Y6K1 SNORD115-6-201ENST00000363942 82 ntBASIC3.08□□□□□ -1.92
DNMT3AQ9Y6K1 SNORD115-42-201ENST00000364273 82 ntBASIC3.08□□□□□ -1.92
DNMT3AQ9Y6K1 SNORD115-15-201ENST00000364809 81 ntBASIC3.08□□□□□ -1.92
DNMT3AQ9Y6K1 SNORD115-26-201ENST00000365067 82 ntBASIC3.08□□□□□ -1.92
DNMT3AQ9Y6K1 SNORD115-10-201ENST00000365073 81 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 195.7 ms