Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 SNORD115-14-201ENST00000363090 81 ntBASIC1.64□□□□□ -2.15
COL4A3BPQ9Y5P4 SNORD115-13-201ENST00000363358 82 ntBASIC1.64□□□□□ -2.15
COL4A3BPQ9Y5P4 SNORD115-41-201ENST00000363608 82 ntBASIC1.64□□□□□ -2.15
COL4A3BPQ9Y5P4 SNORD115-11-201ENST00000363616 82 ntBASIC1.64□□□□□ -2.15
COL4A3BPQ9Y5P4 SNORD115-5-201ENST00000363633 82 ntBASIC1.64□□□□□ -2.15
COL4A3BPQ9Y5P4 RNU6-1020P-201ENST00000363684 107 ntBASIC1.64□□□□□ -2.15
COL4A3BPQ9Y5P4 SNORD115-39-201ENST00000363694 82 ntBASIC1.64□□□□□ -2.15
COL4A3BPQ9Y5P4 SNORD115-4-201ENST00000363810 82 ntBASIC1.64□□□□□ -2.15
COL4A3BPQ9Y5P4 SNORD115-16-201ENST00000363887 82 ntBASIC1.64□□□□□ -2.15
COL4A3BPQ9Y5P4 SNORD115-6-201ENST00000363942 82 ntBASIC1.64□□□□□ -2.15
COL4A3BPQ9Y5P4 SNORD115-42-201ENST00000364273 82 ntBASIC1.64□□□□□ -2.15
COL4A3BPQ9Y5P4 Y_RNA.241-201ENST00000364470 117 ntBASIC1.64□□□□□ -2.15
COL4A3BPQ9Y5P4 SNORD115-15-201ENST00000364809 81 ntBASIC1.64□□□□□ -2.15
COL4A3BPQ9Y5P4 SNORD115-1-201ENST00000364961 82 ntBASIC1.64□□□□□ -2.15
COL4A3BPQ9Y5P4 SNORD115-26-201ENST00000365067 82 ntBASIC1.64□□□□□ -2.15
COL4A3BPQ9Y5P4 SNORD115-10-201ENST00000365073 81 ntBASIC1.64□□□□□ -2.15
COL4A3BPQ9Y5P4 SNORD115-43-201ENST00000365503 82 ntBASIC1.64□□□□□ -2.15
COL4A3BPQ9Y5P4 SNORD115-36-201ENST00000365629 82 ntBASIC1.64□□□□□ -2.15
COL4A3BPQ9Y5P4 SNORA80D-201ENST00000384488 135 ntBASIC1.64□□□□□ -2.15
COL4A3BPQ9Y5P4 SNORD12-201ENST00000391002 90 ntBASIC1.64□□□□□ -2.15
COL4A3BPQ9Y5P4 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.64□□□□□ -2.15
COL4A3BPQ9Y5P4 MIR4308-201ENST00000580634 81 ntBASIC1.64□□□□□ -2.15
COL4A3BPQ9Y5P4 SNORD115-40-201ENST00000606510 82 ntBASIC1.64□□□□□ -2.15
COL4A3BPQ9Y5P4 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.64□□□□□ -2.15
COL4A3BPQ9Y5P4 Y_RNA.37-201ENST00000362606 108 ntBASIC1.63□□□□□ -2.15
COL4A3BPQ9Y5P4 RNU6-379P-201ENST00000363813 104 ntBASIC1.63□□□□□ -2.15
COL4A3BPQ9Y5P4 Y_RNA.182-201ENST00000363880 111 ntBASIC1.63□□□□□ -2.15
COL4A3BPQ9Y5P4 Y_RNA.435-201ENST00000384095 112 ntBASIC1.63□□□□□ -2.15
COL4A3BPQ9Y5P4 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
COL4A3BPQ9Y5P4 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.63□□□□□ -2.15
COL4A3BPQ9Y5P4 AL354695.1-201ENST00000427935 228 ntBASIC1.63□□□□□ -2.15
COL4A3BPQ9Y5P4 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.63□□□□□ -2.15
COL4A3BPQ9Y5P4 AC108729.3-201ENST00000513484 108 ntBASIC1.63□□□□□ -2.15
COL4A3BPQ9Y5P4 AC007751.1-201ENST00000529260 376 ntBASIC1.63□□□□□ -2.15
COL4A3BPQ9Y5P4 AC108706.1-201ENST00000611053 297 ntBASIC1.63□□□□□ -2.15
COL4A3BPQ9Y5P4 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.63□□□□□ -2.15
COL4A3BPQ9Y5P4 MIR103A2-201ENST00000362154 78 ntBASIC1.62□□□□□ -2.15
COL4A3BPQ9Y5P4 RNA5SP264-201ENST00000363115 107 ntBASIC1.62□□□□□ -2.15
COL4A3BPQ9Y5P4 Y_RNA.410-201ENST00000383992 113 ntBASIC1.62□□□□□ -2.15
COL4A3BPQ9Y5P4 MIR548A2-201ENST00000384956 97 ntBASIC1.62□□□□□ -2.15
COL4A3BPQ9Y5P4 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
COL4A3BPQ9Y5P4 MIR4791-201ENST00000607666 84 ntBASIC1.62□□□□□ -2.15
COL4A3BPQ9Y5P4 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.61□□□□□ -2.15
COL4A3BPQ9Y5P4 SNORA40.5-201ENST00000391061 128 ntBASIC1.61□□□□□ -2.15
COL4A3BPQ9Y5P4 AL591704.2-201ENST00000421658 181 ntBASIC1.61□□□□□ -2.15
COL4A3BPQ9Y5P4 AC090821.2-201ENST00000523552 176 ntBASIC1.61□□□□□ -2.15
COL4A3BPQ9Y5P4 AP003484.1-201ENST00000530974 250 ntBASIC1.61□□□□□ -2.15
COL4A3BPQ9Y5P4 PRELID3BP2-201ENST00000605362 201 ntBASIC1.61□□□□□ -2.15
COL4A3BPQ9Y5P4 ZNF209P-201ENST00000593450 2304 ntBASIC1.61□□□□□ -2.15
COL4A3BPQ9Y5P4 RNU6-275P-201ENST00000364910 107 ntBASIC1.6□□□□□ -2.15
COL4A3BPQ9Y5P4 Y_RNA.542-201ENST00000384641 111 ntBASIC1.6□□□□□ -2.15
COL4A3BPQ9Y5P4 RNU6-561P-201ENST00000516222 102 ntBASIC1.6□□□□□ -2.15
COL4A3BPQ9Y5P4 RNU11-2P-201ENST00000516898 142 ntBASIC1.6□□□□□ -2.15
COL4A3BPQ9Y5P4 AC130289.1-201ENST00000577321 73 ntBASIC1.6□□□□□ -2.15
COL4A3BPQ9Y5P4 AC243994.1-201ENST00000618627 109 ntBASIC1.6□□□□□ -2.15
COL4A3BPQ9Y5P4 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.59□□□□□ -2.15
COL4A3BPQ9Y5P4 U8.1-201ENST00000362843 134 ntBASIC1.59□□□□□ -2.15
COL4A3BPQ9Y5P4 RNU6-955P-201ENST00000410497 104 ntBASIC1.59□□□□□ -2.15
COL4A3BPQ9Y5P4 AC009474.2-201ENST00000451383 136 ntBASIC1.59□□□□□ -2.15
COL4A3BPQ9Y5P4 RPS29P29-201ENST00000456396 171 ntBASIC1.59□□□□□ -2.15
COL4A3BPQ9Y5P4 RNU2-13P-201ENST00000515909 113 ntBASIC1.59□□□□□ -2.15
COL4A3BPQ9Y5P4 SNORD79.1-201ENST00000516069 84 ntBASIC1.59□□□□□ -2.15
COL4A3BPQ9Y5P4 RNU7-40P-201ENST00000516397 64 ntBASIC1.59□□□□□ -2.15
COL4A3BPQ9Y5P4 RNU1-92P-201ENST00000517017 135 ntBASIC1.59□□□□□ -2.15
COL4A3BPQ9Y5P4 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.58□□□□□ -2.16
COL4A3BPQ9Y5P4 Y_RNA.75-201ENST00000362927 97 ntBASIC1.58□□□□□ -2.16
COL4A3BPQ9Y5P4 RNU6-1189P-201ENST00000383958 107 ntBASIC1.58□□□□□ -2.16
COL4A3BPQ9Y5P4 MIR570-201ENST00000384917 97 ntBASIC1.58□□□□□ -2.16
COL4A3BPQ9Y5P4 MIR618-201ENST00000385287 98 ntBASIC1.58□□□□□ -2.16
COL4A3BPQ9Y5P4 RNU6-918P-201ENST00000391219 106 ntBASIC1.58□□□□□ -2.16
COL4A3BPQ9Y5P4 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.58□□□□□ -2.16
COL4A3BPQ9Y5P4 snoU13.25-201ENST00000458945 104 ntBASIC1.58□□□□□ -2.16
COL4A3BPQ9Y5P4 SNORD116-25-201ENST00000516517 92 ntBASIC1.58□□□□□ -2.16
COL4A3BPQ9Y5P4 RNU6-388P-201ENST00000517012 105 ntBASIC1.58□□□□□ -2.16
COL4A3BPQ9Y5P4 RNU6-389P-201ENST00000517048 105 ntBASIC1.58□□□□□ -2.16
COL4A3BPQ9Y5P4 MIR4421-201ENST00000578133 69 ntBASIC1.58□□□□□ -2.16
COL4A3BPQ9Y5P4 AC027335.2-201ENST00000624030 375 ntBASIC1.58□□□□□ -2.16
COL4A3BPQ9Y5P4 SNORA25.3-201ENST00000363205 127 ntBASIC1.57□□□□□ -2.16
COL4A3BPQ9Y5P4 SNORA27-201ENST00000384323 126 ntBASIC1.57□□□□□ -2.16
COL4A3BPQ9Y5P4 RNU6ATAC23P-201ENST00000408448 123 ntBASIC1.57□□□□□ -2.16
COL4A3BPQ9Y5P4 AL138752.1-201ENST00000452964 351 ntBASIC1.57□□□□□ -2.16
COL4A3BPQ9Y5P4 RNU7-67P-201ENST00000459003 62 ntBASIC1.57□□□□□ -2.16
COL4A3BPQ9Y5P4 RNU6-1053P-201ENST00000515930 101 ntBASIC1.57□□□□□ -2.16
COL4A3BPQ9Y5P4 AP003716.2-201ENST00000528260 108 ntBASIC1.57□□□□□ -2.16
COL4A3BPQ9Y5P4 MIR378D2-201ENST00000580636 98 ntBASIC1.57□□□□□ -2.16
COL4A3BPQ9Y5P4 AC078938.1-201ENST00000620993 318 ntBASIC1.57□□□□□ -2.16
COL4A3BPQ9Y5P4 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
COL4A3BPQ9Y5P4 Y_RNA.23-201ENST00000362496 106 ntBASIC1.56□□□□□ -2.16
COL4A3BPQ9Y5P4 SNORA7.1-201ENST00000363750 139 ntBASIC1.56□□□□□ -2.16
COL4A3BPQ9Y5P4 Y_RNA.297-201ENST00000364950 91 ntBASIC1.56□□□□□ -2.16
COL4A3BPQ9Y5P4 RNU6-643P-201ENST00000384018 107 ntBASIC1.56□□□□□ -2.16
COL4A3BPQ9Y5P4 AC063976.4-201ENST00000421971 163 ntBASIC1.56□□□□□ -2.16
COL4A3BPQ9Y5P4 AF228730.3-201ENST00000436691 102 ntBASIC1.56□□□□□ -2.16
COL4A3BPQ9Y5P4 snoU13.16-201ENST00000459350 104 ntBASIC1.56□□□□□ -2.16
COL4A3BPQ9Y5P4 RPS26P48-201ENST00000491713 339 ntBASIC1.56□□□□□ -2.16
COL4A3BPQ9Y5P4 RNA5SP61-201ENST00000516453 100 ntBASIC1.56□□□□□ -2.16
COL4A3BPQ9Y5P4 RNU7-53P-201ENST00000516705 60 ntBASIC1.56□□□□□ -2.16
COL4A3BPQ9Y5P4 MRPS18CP4-201ENST00000535821 231 ntBASIC1.56□□□□□ -2.16
COL4A3BPQ9Y5P4 AL359821.1-201ENST00000605519 182 ntBASIC1.56□□□□□ -2.16
COL4A3BPQ9Y5P4 SNORA24-201ENST00000384096 131 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms