Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.95□□□□□ -2.1
PCDHB1Q9Y5F3 HMGN2P38-201ENST00000423806 265 ntBASIC1.95□□□□□ -2.1
PCDHB1Q9Y5F3 RNU5E-3P-201ENST00000515913 68 ntBASIC1.95□□□□□ -2.1
PCDHB1Q9Y5F3 RNU6-1053P-201ENST00000515930 101 ntBASIC1.95□□□□□ -2.1
PCDHB1Q9Y5F3 RNU4-57P-201ENST00000515980 135 ntBASIC1.95□□□□□ -2.1
PCDHB1Q9Y5F3 RNU6-659P-201ENST00000516454 104 ntBASIC1.95□□□□□ -2.1
PCDHB1Q9Y5F3 MIR5089-201ENST00000580047 84 ntBASIC1.95□□□□□ -2.1
PCDHB1Q9Y5F3 RNU6-268P-201ENST00000364174 107 ntBASIC1.94□□□□□ -2.1
PCDHB1Q9Y5F3 RNU6-203P-201ENST00000384038 104 ntBASIC1.94□□□□□ -2.1
PCDHB1Q9Y5F3 SNORD20-201ENST00000384550 80 ntBASIC1.94□□□□□ -2.1
PCDHB1Q9Y5F3 SNORA17.3-201ENST00000391159 129 ntBASIC1.94□□□□□ -2.1
PCDHB1Q9Y5F3 RNU2-40P-201ENST00000410833 196 ntBASIC1.94□□□□□ -2.1
PCDHB1Q9Y5F3 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.94□□□□□ -2.1
PCDHB1Q9Y5F3 SNRPGP14-201ENST00000435400 219 ntBASIC1.94□□□□□ -2.1
PCDHB1Q9Y5F3 SNRPGP13-201ENST00000442212 177 ntBASIC1.94□□□□□ -2.1
PCDHB1Q9Y5F3 AC131055.1-201ENST00000584626 316 ntBASIC1.94□□□□□ -2.1
PCDHB1Q9Y5F3 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.94□□□□□ -2.1
PCDHB1Q9Y5F3 Y_RNA.226-201ENST00000364337 114 ntBASIC1.93□□□□□ -2.1
PCDHB1Q9Y5F3 MIR518F-201ENST00000384973 87 ntBASIC1.93□□□□□ -2.1
PCDHB1Q9Y5F3 AL161935.2-201ENST00000414627 60 ntBASIC1.93□□□□□ -2.1
PCDHB1Q9Y5F3 AL445685.2-201ENST00000422551 342 ntBASIC1.93□□□□□ -2.1
PCDHB1Q9Y5F3 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.93□□□□□ -2.1
PCDHB1Q9Y5F3 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.93□□□□□ -2.1
PCDHB1Q9Y5F3 SNORA18.4-201ENST00000516440 124 ntBASIC1.93□□□□□ -2.1
PCDHB1Q9Y5F3 AL365205.2-201ENST00000594586 68 ntBASIC1.93□□□□□ -2.1
PCDHB1Q9Y5F3 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.93□□□□□ -2.1
PCDHB1Q9Y5F3 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.93□□□□□ -2.1
PCDHB1Q9Y5F3 RNU6-439P-201ENST00000384188 106 ntBASIC1.92□□□□□ -2.1
PCDHB1Q9Y5F3 Y_RNA.630-201ENST00000411370 108 ntBASIC1.92□□□□□ -2.1
PCDHB1Q9Y5F3 AC015922.2-201ENST00000435593 184 ntBASIC1.92□□□□□ -2.1
PCDHB1Q9Y5F3 AF228730.3-201ENST00000436691 102 ntBASIC1.92□□□□□ -2.1
PCDHB1Q9Y5F3 RNU6-693P-201ENST00000516134 107 ntBASIC1.92□□□□□ -2.1
PCDHB1Q9Y5F3 Y_RNA.690-201ENST00000516603 95 ntBASIC1.92□□□□□ -2.1
PCDHB1Q9Y5F3 AL096840.1-201ENST00000603287 93 ntBASIC1.92□□□□□ -2.1
PCDHB1Q9Y5F3 AC103810.8-201ENST00000607347 118 ntBASIC1.92□□□□□ -2.1
PCDHB1Q9Y5F3 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.92□□□□□ -2.1
PCDHB1Q9Y5F3 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
PCDHB1Q9Y5F3 RNU6-888P-201ENST00000363010 101 ntBASIC1.91□□□□□ -2.1
PCDHB1Q9Y5F3 Y_RNA.114-201ENST00000363265 113 ntBASIC1.91□□□□□ -2.1
PCDHB1Q9Y5F3 Y_RNA.120-201ENST00000363304 110 ntBASIC1.91□□□□□ -2.1
PCDHB1Q9Y5F3 Y_RNA.280-201ENST00000364765 112 ntBASIC1.91□□□□□ -2.1
PCDHB1Q9Y5F3 MIR30A-201ENST00000385092 71 ntBASIC1.91□□□□□ -2.1
PCDHB1Q9Y5F3 MIR624-201ENST00000385217 97 ntBASIC1.91□□□□□ -2.1
PCDHB1Q9Y5F3 SNORD77.3-201ENST00000391113 65 ntBASIC1.91□□□□□ -2.1
PCDHB1Q9Y5F3 RNA5SP127-201ENST00000411051 133 ntBASIC1.91□□□□□ -2.1
PCDHB1Q9Y5F3 HMGN2P19-201ENST00000425149 265 ntBASIC1.91□□□□□ -2.1
PCDHB1Q9Y5F3 AC093850.1-201ENST00000454121 251 ntBASIC1.91□□□□□ -2.1
PCDHB1Q9Y5F3 Y_RNA.651-201ENST00000459380 103 ntBASIC1.91□□□□□ -2.1
PCDHB1Q9Y5F3 RNU6-772P-201ENST00000516042 105 ntBASIC1.91□□□□□ -2.1
PCDHB1Q9Y5F3 RNU6-830P-201ENST00000516353 107 ntBASIC1.91□□□□□ -2.1
PCDHB1Q9Y5F3 RNU7-25P-201ENST00000516544 62 ntBASIC1.91□□□□□ -2.1
PCDHB1Q9Y5F3 MIR4778-201ENST00000577635 80 ntBASIC1.91□□□□□ -2.1
PCDHB1Q9Y5F3 MIR3121-201ENST00000579680 77 ntBASIC1.91□□□□□ -2.1
PCDHB1Q9Y5F3 MIR3935-201ENST00000583472 104 ntBASIC1.91□□□□□ -2.1
PCDHB1Q9Y5F3 MIR4781-201ENST00000585250 76 ntBASIC1.91□□□□□ -2.1
PCDHB1Q9Y5F3 AL359881.1-201ENST00000602916 267 ntBASIC1.91□□□□□ -2.1
PCDHB1Q9Y5F3 SNRPGP19-201ENST00000603826 189 ntBASIC1.91□□□□□ -2.1
PCDHB1Q9Y5F3 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.91□□□□□ -2.1
PCDHB1Q9Y5F3 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.9□□□□□ -2.1
PCDHB1Q9Y5F3 Y_RNA.353-201ENST00000365440 108 ntBASIC1.9□□□□□ -2.11
PCDHB1Q9Y5F3 MIR136-201ENST00000385207 82 ntBASIC1.9□□□□□ -2.11
PCDHB1Q9Y5F3 MIR548O-201ENST00000408583 114 ntBASIC1.9□□□□□ -2.11
PCDHB1Q9Y5F3 MTATP6P29-201ENST00000415057 132 ntBASIC1.9□□□□□ -2.11
PCDHB1Q9Y5F3 AC003989.2-201ENST00000440224 169 ntBASIC1.9□□□□□ -2.11
PCDHB1Q9Y5F3 RNA5SP182-201ENST00000516064 82 ntBASIC1.9□□□□□ -2.11
PCDHB1Q9Y5F3 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.9□□□□□ -2.11
PCDHB1Q9Y5F3 SNORA77B-201ENST00000578179 125 ntBASIC1.9□□□□□ -2.11
PCDHB1Q9Y5F3 AC108081.1-201ENST00000604358 221 ntBASIC1.9□□□□□ -2.11
PCDHB1Q9Y5F3 AC095038.3-201ENST00000634439 195 ntBASIC1.9□□□□□ -2.11
PCDHB1Q9Y5F3 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.9□□□□□ -2.11
PCDHB1Q9Y5F3 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.89□□□□□ -2.11
PCDHB1Q9Y5F3 AL442644.1-201ENST00000454390 3105 ntBASIC1.89□□□□□ -2.11
PCDHB1Q9Y5F3 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
PCDHB1Q9Y5F3 SNORA40.5-201ENST00000391061 128 ntBASIC1.89□□□□□ -2.11
PCDHB1Q9Y5F3 Y_RNA.629-201ENST00000411368 105 ntBASIC1.89□□□□□ -2.11
PCDHB1Q9Y5F3 AL158147.1-201ENST00000443970 75 ntBASIC1.89□□□□□ -2.11
PCDHB1Q9Y5F3 RNU6-781P-201ENST00000516377 101 ntBASIC1.89□□□□□ -2.11
PCDHB1Q9Y5F3 Y_RNA.692-201ENST00000516627 105 ntBASIC1.89□□□□□ -2.11
PCDHB1Q9Y5F3 SUMO2P16-201ENST00000519475 264 ntBASIC1.89□□□□□ -2.11
PCDHB1Q9Y5F3 IGKV1-22-201ENST00000524313 326 ntBASIC1.89□□□□□ -2.11
PCDHB1Q9Y5F3 MIR4448-201ENST00000584360 86 ntBASIC1.89□□□□□ -2.11
PCDHB1Q9Y5F3 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.89□□□□□ -2.11
PCDHB1Q9Y5F3 AL022345.2-201ENST00000606307 135 ntBASIC1.89□□□□□ -2.11
PCDHB1Q9Y5F3 MIR7111-201ENST00000619751 72 ntBASIC1.89□□□□□ -2.11
PCDHB1Q9Y5F3 Y_RNA.81-201ENST00000362997 102 ntBASIC1.88□□□□□ -2.11
PCDHB1Q9Y5F3 RNU6-215P-201ENST00000365169 102 ntBASIC1.88□□□□□ -2.11
PCDHB1Q9Y5F3 SNORA2.2-201ENST00000365473 135 ntBASIC1.88□□□□□ -2.11
PCDHB1Q9Y5F3 RNU6-44P-201ENST00000384045 107 ntBASIC1.88□□□□□ -2.11
PCDHB1Q9Y5F3 RNU6-429P-201ENST00000384582 108 ntBASIC1.88□□□□□ -2.11
PCDHB1Q9Y5F3 MIR513A1-201ENST00000385138 129 ntBASIC1.88□□□□□ -2.11
PCDHB1Q9Y5F3 snoU13.9-201ENST00000458927 103 ntBASIC1.88□□□□□ -2.11
PCDHB1Q9Y5F3 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.88□□□□□ -2.11
PCDHB1Q9Y5F3 RNA5SP236-201ENST00000516169 116 ntBASIC1.88□□□□□ -2.11
PCDHB1Q9Y5F3 RNU6-1149P-201ENST00000516810 97 ntBASIC1.88□□□□□ -2.11
PCDHB1Q9Y5F3 AC134878.1-201ENST00000619901 243 ntBASIC1.88□□□□□ -2.11
PCDHB1Q9Y5F3 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
PCDHB1Q9Y5F3 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.87□□□□□ -2.11
PCDHB1Q9Y5F3 RNU6-457P-201ENST00000363999 107 ntBASIC1.87□□□□□ -2.11
PCDHB1Q9Y5F3 RNA5SP259-201ENST00000365541 109 ntBASIC1.87□□□□□ -2.11
PCDHB1Q9Y5F3 RNU6-1292P-201ENST00000383856 107 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 181.3 ms