Protein–RNA interactions for Protein: Q9Y3E7

CHMP3, Charged multivesicular body protein 3, humanhuman

Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3Q9Y3E7 SNORD115-16-201ENST00000363887 82 ntBASIC2.96□□□□□ -1.94
CHMP3Q9Y3E7 SNORD115-6-201ENST00000363942 82 ntBASIC2.96□□□□□ -1.94
CHMP3Q9Y3E7 SNORD115-42-201ENST00000364273 82 ntBASIC2.96□□□□□ -1.94
CHMP3Q9Y3E7 SNORD115-15-201ENST00000364809 81 ntBASIC2.96□□□□□ -1.94
CHMP3Q9Y3E7 SNORD115-1-201ENST00000364961 82 ntBASIC2.96□□□□□ -1.94
CHMP3Q9Y3E7 SNORD115-26-201ENST00000365067 82 ntBASIC2.96□□□□□ -1.94
CHMP3Q9Y3E7 SNORD115-10-201ENST00000365073 81 ntBASIC2.96□□□□□ -1.94
CHMP3Q9Y3E7 SNORD115-43-201ENST00000365503 82 ntBASIC2.96□□□□□ -1.94
CHMP3Q9Y3E7 SNORD115-36-201ENST00000365629 82 ntBASIC2.96□□□□□ -1.94
CHMP3Q9Y3E7 DEFA7P-201ENST00000382676 285 ntBASIC2.96□□□□□ -1.94
CHMP3Q9Y3E7 AL034345.1-201ENST00000407768 123 ntBASIC2.96□□□□□ -1.94
CHMP3Q9Y3E7 MIR1267-201ENST00000408723 78 ntBASIC2.96□□□□□ -1.94
CHMP3Q9Y3E7 RNY4P29-201ENST00000410801 97 ntBASIC2.96□□□□□ -1.94
CHMP3Q9Y3E7 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.96□□□□□ -1.94
CHMP3Q9Y3E7 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.96□□□□□ -1.94
CHMP3Q9Y3E7 RNU7-96P-201ENST00000459535 64 ntBASIC2.96□□□□□ -1.94
CHMP3Q9Y3E7 AC113410.1-201ENST00000505029 247 ntBASIC2.96□□□□□ -1.94
CHMP3Q9Y3E7 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.96□□□□□ -1.94
CHMP3Q9Y3E7 IGLV3-17-201ENST00000519099 244 ntBASIC2.96□□□□□ -1.94
CHMP3Q9Y3E7 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.96□□□□□ -1.94
CHMP3Q9Y3E7 SNORD115-40-201ENST00000606510 82 ntBASIC2.96□□□□□ -1.94
CHMP3Q9Y3E7 Y_RNA.773-201ENST00000607168 90 ntBASIC2.96□□□□□ -1.94
CHMP3Q9Y3E7 MIR1255B1-201ENST00000636325 63 ntBASIC2.96□□□□□ -1.94
CHMP3Q9Y3E7 MIR302B-201ENST00000362188 73 ntBASIC2.95□□□□□ -1.94
CHMP3Q9Y3E7 SNORA67.1-201ENST00000364749 141 ntBASIC2.95□□□□□ -1.94
CHMP3Q9Y3E7 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
CHMP3Q9Y3E7 RPS3AP1-201ENST00000413190 320 ntBASIC2.95□□□□□ -1.94
CHMP3Q9Y3E7 POLR2J4-204ENST00000418424 324 ntBASIC2.95□□□□□ -1.94
CHMP3Q9Y3E7 MTATP8P2-201ENST00000435212 202 ntBASIC2.95□□□□□ -1.94
CHMP3Q9Y3E7 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.95□□□□□ -1.94
CHMP3Q9Y3E7 RPS23P4-201ENST00000487908 423 ntBASIC2.95□□□□□ -1.94
CHMP3Q9Y3E7 SNORA31.15-201ENST00000516771 132 ntBASIC2.95□□□□□ -1.94
CHMP3Q9Y3E7 RNU6-1258P-201ENST00000516911 111 ntBASIC2.95□□□□□ -1.94
CHMP3Q9Y3E7 RNA5SP437-201ENST00000517249 129 ntBASIC2.95□□□□□ -1.94
CHMP3Q9Y3E7 MIR3670-2-201ENST00000582974 65 ntBASIC2.95□□□□□ -1.94
CHMP3Q9Y3E7 MIR3670-1-201ENST00000584160 65 ntBASIC2.95□□□□□ -1.94
CHMP3Q9Y3E7 MIR3670-3-201ENST00000584855 65 ntBASIC2.95□□□□□ -1.94
CHMP3Q9Y3E7 MIR3670-4-201ENST00000612260 65 ntBASIC2.95□□□□□ -1.94
CHMP3Q9Y3E7 Y_RNA.818-201ENST00000618813 71 ntBASIC2.95□□□□□ -1.94
CHMP3Q9Y3E7 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CHMP3Q9Y3E7 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
CHMP3Q9Y3E7 Y_RNA.78-201ENST00000362970 110 ntBASIC2.94□□□□□ -1.94
CHMP3Q9Y3E7 RNU1-52P-201ENST00000384190 164 ntBASIC2.94□□□□□ -1.94
CHMP3Q9Y3E7 SNORA70B-201ENST00000384210 135 ntBASIC2.94□□□□□ -1.94
CHMP3Q9Y3E7 RNU6-1031P-201ENST00000384773 107 ntBASIC2.94□□□□□ -1.94
CHMP3Q9Y3E7 ATP6V0E1P1-201ENST00000412537 226 ntBASIC2.94□□□□□ -1.94
CHMP3Q9Y3E7 RNA5SP57-201ENST00000459463 123 ntBASIC2.94□□□□□ -1.94
CHMP3Q9Y3E7 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.94□□□□□ -1.94
CHMP3Q9Y3E7 MIR3618-201ENST00000580330 88 ntBASIC2.94□□□□□ -1.94
CHMP3Q9Y3E7 ZNF658B-202ENST00000615961 3375 ntBASIC2.94□□□□□ -1.94
CHMP3Q9Y3E7 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CHMP3Q9Y3E7 Y_RNA.171-201ENST00000363760 102 ntBASIC2.93□□□□□ -1.94
CHMP3Q9Y3E7 Y_RNA.558-201ENST00000384685 113 ntBASIC2.93□□□□□ -1.94
CHMP3Q9Y3E7 AL022718.1-201ENST00000412004 84 ntBASIC2.93□□□□□ -1.94
CHMP3Q9Y3E7 SCARNA16.3-201ENST00000516595 184 ntBASIC2.93□□□□□ -1.94
CHMP3Q9Y3E7 Y_RNA.531-201ENST00000384589 121 ntBASIC2.92□□□□□ -1.94
CHMP3Q9Y3E7 SNORA26.2-201ENST00000390922 122 ntBASIC2.92□□□□□ -1.94
CHMP3Q9Y3E7 MIR1261-201ENST00000408659 82 ntBASIC2.92□□□□□ -1.94
CHMP3Q9Y3E7 RNA5SP181-201ENST00000410246 98 ntBASIC2.92□□□□□ -1.94
CHMP3Q9Y3E7 RN7SKP192-201ENST00000411291 327 ntBASIC2.92□□□□□ -1.94
CHMP3Q9Y3E7 AC069257.2-201ENST00000441819 155 ntBASIC2.92□□□□□ -1.94
CHMP3Q9Y3E7 RNA5SP137-201ENST00000516833 135 ntBASIC2.92□□□□□ -1.94
CHMP3Q9Y3E7 AL442128.1-201ENST00000615151 90 ntBASIC2.92□□□□□ -1.94
CHMP3Q9Y3E7 SNORA38-201ENST00000363946 132 ntBASIC2.91□□□□□ -1.94
CHMP3Q9Y3E7 RNU1-51P-201ENST00000365345 176 ntBASIC2.91□□□□□ -1.94
CHMP3Q9Y3E7 MIR518A2-201ENST00000384966 87 ntBASIC2.91□□□□□ -1.94
CHMP3Q9Y3E7 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.91□□□□□ -1.94
CHMP3Q9Y3E7 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.91□□□□□ -1.94
CHMP3Q9Y3E7 MIR1912-201ENST00000410389 80 ntBASIC2.91□□□□□ -1.94
CHMP3Q9Y3E7 RPL23AP63-201ENST00000498752 471 ntBASIC2.91□□□□□ -1.94
CHMP3Q9Y3E7 MALAT1.1-201ENST00000618249 95 ntBASIC2.91□□□□□ -1.94
CHMP3Q9Y3E7 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.91□□□□□ -1.94
CHMP3Q9Y3E7 FO624990.1-201ENST00000636373 85 ntBASIC2.91□□□□□ -1.94
CHMP3Q9Y3E7 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CHMP3Q9Y3E7 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
CHMP3Q9Y3E7 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC2.9□□□□□ -1.95
CHMP3Q9Y3E7 RNY3P2-201ENST00000362918 102 ntBASIC2.9□□□□□ -1.95
CHMP3Q9Y3E7 SNORD28B-201ENST00000390993 75 ntBASIC2.9□□□□□ -1.95
CHMP3Q9Y3E7 RNA5SP425-201ENST00000410336 112 ntBASIC2.9□□□□□ -1.95
CHMP3Q9Y3E7 RNU6-1190P-201ENST00000410811 104 ntBASIC2.9□□□□□ -1.95
CHMP3Q9Y3E7 RNU7-34P-201ENST00000459394 64 ntBASIC2.9□□□□□ -1.95
CHMP3Q9Y3E7 RNU6-844P-201ENST00000517175 102 ntBASIC2.9□□□□□ -1.95
CHMP3Q9Y3E7 AC062037.1-201ENST00000605302 128 ntBASIC2.9□□□□□ -1.95
CHMP3Q9Y3E7 MIR6873-201ENST00000622788 63 ntBASIC2.9□□□□□ -1.95
CHMP3Q9Y3E7 AC010297.1-201ENST00000623948 149 ntBASIC2.9□□□□□ -1.95
CHMP3Q9Y3E7 AL355596.1-201ENST00000565399 3996 ntBASIC2.9□□□□□ -1.95
CHMP3Q9Y3E7 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CHMP3Q9Y3E7 Y_RNA.220-201ENST00000364244 109 ntBASIC2.89□□□□□ -1.95
CHMP3Q9Y3E7 Y_RNA.342-201ENST00000365352 113 ntBASIC2.89□□□□□ -1.95
CHMP3Q9Y3E7 MIR526A1-201ENST00000384897 85 ntBASIC2.89□□□□□ -1.95
CHMP3Q9Y3E7 UBL5P3-201ENST00000475112 231 ntBASIC2.89□□□□□ -1.95
CHMP3Q9Y3E7 RNU6-958P-201ENST00000516995 106 ntBASIC2.89□□□□□ -1.95
CHMP3Q9Y3E7 RNU6-158P-201ENST00000517104 100 ntBASIC2.89□□□□□ -1.95
CHMP3Q9Y3E7 DEFB131E-201ENST00000532329 154 ntBASIC2.89□□□□□ -1.95
CHMP3Q9Y3E7 AC024614.2-201ENST00000577584 372 ntBASIC2.89□□□□□ -1.95
CHMP3Q9Y3E7 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.89□□□□□ -1.95
CHMP3Q9Y3E7 AC067747.1-201ENST00000608026 250 ntBASIC2.89□□□□□ -1.95
CHMP3Q9Y3E7 AC021506.2-201ENST00000612354 169 ntBASIC2.89□□□□□ -1.95
CHMP3Q9Y3E7 MIR203B-201ENST00000636080 86 ntBASIC2.89□□□□□ -1.95
CHMP3Q9Y3E7 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 230.7 ms