Protein–RNA interactions for Protein: Q9Y3B4

SF3B6, Splicing factor 3B subunit 6, humanhuman

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6Q9Y3B4 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.19□□□□□ -2.06
SF3B6Q9Y3B4 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
SF3B6Q9Y3B4 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.18□□□□□ -2.06
SF3B6Q9Y3B4 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
SF3B6Q9Y3B4 RNU6-1107P-201ENST00000364817 104 ntBASIC2.18□□□□□ -2.06
SF3B6Q9Y3B4 MIR194-1-201ENST00000384892 85 ntBASIC2.18□□□□□ -2.06
SF3B6Q9Y3B4 RNU6-1190P-201ENST00000410811 104 ntBASIC2.18□□□□□ -2.06
SF3B6Q9Y3B4 AC004965.1-201ENST00000413033 213 ntBASIC2.18□□□□□ -2.06
SF3B6Q9Y3B4 AL512326.2-201ENST00000426359 151 ntBASIC2.18□□□□□ -2.06
SF3B6Q9Y3B4 MIR3613-201ENST00000579844 87 ntBASIC2.18□□□□□ -2.06
SF3B6Q9Y3B4 MIR4791-201ENST00000607666 84 ntBASIC2.18□□□□□ -2.06
SF3B6Q9Y3B4 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
SF3B6Q9Y3B4 MIR450A1-201ENST00000362262 91 ntBASIC2.17□□□□□ -2.06
SF3B6Q9Y3B4 Y_RNA.85-201ENST00000363014 111 ntBASIC2.17□□□□□ -2.06
SF3B6Q9Y3B4 RNY4P6-201ENST00000363667 96 ntBASIC2.17□□□□□ -2.06
SF3B6Q9Y3B4 Y_RNA.362-201ENST00000365518 110 ntBASIC2.17□□□□□ -2.06
SF3B6Q9Y3B4 RNU6-913P-201ENST00000390913 95 ntBASIC2.17□□□□□ -2.06
SF3B6Q9Y3B4 POLR2J4-204ENST00000418424 324 ntBASIC2.17□□□□□ -2.06
SF3B6Q9Y3B4 RPL23AP6-201ENST00000446637 472 ntBASIC2.17□□□□□ -2.06
SF3B6Q9Y3B4 RNU7-53P-201ENST00000516705 60 ntBASIC2.17□□□□□ -2.06
SF3B6Q9Y3B4 SNORA74.3-201ENST00000517108 154 ntBASIC2.17□□□□□ -2.06
SF3B6Q9Y3B4 RPL12P50-201ENST00000603116 116 ntBASIC2.17□□□□□ -2.06
SF3B6Q9Y3B4 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC2.17□□□□□ -2.06
SF3B6Q9Y3B4 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
SF3B6Q9Y3B4 AC062016.1-201ENST00000355719 319 ntBASIC2.16□□□□□ -2.06
SF3B6Q9Y3B4 SNORA24-201ENST00000384096 131 ntBASIC2.16□□□□□ -2.06
SF3B6Q9Y3B4 RNA5SP212-201ENST00000391223 107 ntBASIC2.16□□□□□ -2.06
SF3B6Q9Y3B4 AL022718.1-201ENST00000412004 84 ntBASIC2.16□□□□□ -2.06
SF3B6Q9Y3B4 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.16□□□□□ -2.06
SF3B6Q9Y3B4 AC011753.1-201ENST00000451001 220 ntBASIC2.16□□□□□ -2.06
SF3B6Q9Y3B4 MIR3162-201ENST00000581818 82 ntBASIC2.16□□□□□ -2.06
SF3B6Q9Y3B4 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
SF3B6Q9Y3B4 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.15□□□□□ -2.06
SF3B6Q9Y3B4 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
SF3B6Q9Y3B4 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.15□□□□□ -2.06
SF3B6Q9Y3B4 RNU6-106P-201ENST00000384405 107 ntBASIC2.15□□□□□ -2.07
SF3B6Q9Y3B4 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
SF3B6Q9Y3B4 RNU6-1319P-201ENST00000390855 104 ntBASIC2.15□□□□□ -2.07
SF3B6Q9Y3B4 RNU6-747P-201ENST00000390928 104 ntBASIC2.15□□□□□ -2.07
SF3B6Q9Y3B4 RNU6-241P-201ENST00000391148 104 ntBASIC2.15□□□□□ -2.07
SF3B6Q9Y3B4 RNU6-177P-201ENST00000411257 104 ntBASIC2.15□□□□□ -2.07
SF3B6Q9Y3B4 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.15□□□□□ -2.07
SF3B6Q9Y3B4 AC004812.1-201ENST00000540773 146 ntBASIC2.15□□□□□ -2.07
SF3B6Q9Y3B4 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.15□□□□□ -2.07
SF3B6Q9Y3B4 MIR4679-2-201ENST00000578358 77 ntBASIC2.15□□□□□ -2.07
SF3B6Q9Y3B4 AC067747.1-201ENST00000608026 250 ntBASIC2.15□□□□□ -2.07
SF3B6Q9Y3B4 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.15□□□□□ -2.07
SF3B6Q9Y3B4 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
SF3B6Q9Y3B4 AL589743.1-201ENST00000551932 2712 ntBASIC2.15□□□□□ -2.07
SF3B6Q9Y3B4 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
SF3B6Q9Y3B4 Y_RNA.171-201ENST00000363760 102 ntBASIC2.14□□□□□ -2.07
SF3B6Q9Y3B4 Y_RNA.344-201ENST00000365381 112 ntBASIC2.14□□□□□ -2.07
SF3B6Q9Y3B4 Y_RNA.500-201ENST00000384466 111 ntBASIC2.14□□□□□ -2.07
SF3B6Q9Y3B4 RNU6-554P-201ENST00000410466 106 ntBASIC2.14□□□□□ -2.07
SF3B6Q9Y3B4 AL161935.2-201ENST00000414627 60 ntBASIC2.14□□□□□ -2.07
SF3B6Q9Y3B4 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.14□□□□□ -2.07
SF3B6Q9Y3B4 RNU7-6P-201ENST00000516845 62 ntBASIC2.14□□□□□ -2.07
SF3B6Q9Y3B4 RNU6-1258P-201ENST00000516911 111 ntBASIC2.14□□□□□ -2.07
SF3B6Q9Y3B4 MIR3163-201ENST00000581592 73 ntBASIC2.14□□□□□ -2.07
SF3B6Q9Y3B4 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC2.14□□□□□ -2.07
SF3B6Q9Y3B4 AL773524.1-201ENST00000614065 229 ntBASIC2.14□□□□□ -2.07
SF3B6Q9Y3B4 MIR6852-201ENST00000621699 66 ntBASIC2.14□□□□□ -2.07
SF3B6Q9Y3B4 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.14□□□□□ -2.07
SF3B6Q9Y3B4 RNA5SP259-201ENST00000365541 109 ntBASIC2.13□□□□□ -2.07
SF3B6Q9Y3B4 SNORA51.10-201ENST00000384418 136 ntBASIC2.13□□□□□ -2.07
SF3B6Q9Y3B4 Y_RNA.531-201ENST00000384589 121 ntBASIC2.13□□□□□ -2.07
SF3B6Q9Y3B4 Y_RNA.537-201ENST00000384626 109 ntBASIC2.13□□□□□ -2.07
SF3B6Q9Y3B4 MIR548D2-201ENST00000384955 97 ntBASIC2.13□□□□□ -2.07
SF3B6Q9Y3B4 MIR513A1-201ENST00000385138 129 ntBASIC2.13□□□□□ -2.07
SF3B6Q9Y3B4 SNORA26.6-201ENST00000391256 115 ntBASIC2.13□□□□□ -2.07
SF3B6Q9Y3B4 JTBP1-201ENST00000441314 247 ntBASIC2.13□□□□□ -2.07
SF3B6Q9Y3B4 AL031737.1-201ENST00000450125 223 ntBASIC2.13□□□□□ -2.07
SF3B6Q9Y3B4 RNU7-73P-201ENST00000458743 63 ntBASIC2.13□□□□□ -2.07
SF3B6Q9Y3B4 AC104435.1-201ENST00000483483 166 ntBASIC2.13□□□□□ -2.07
SF3B6Q9Y3B4 MIR4287-201ENST00000579398 78 ntBASIC2.13□□□□□ -2.07
SF3B6Q9Y3B4 AL513534.2-201ENST00000603836 250 ntBASIC2.13□□□□□ -2.07
SF3B6Q9Y3B4 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.13□□□□□ -2.07
SF3B6Q9Y3B4 SNORA22.1-201ENST00000362701 134 ntBASIC2.12□□□□□ -2.07
SF3B6Q9Y3B4 RNU6-1067P-201ENST00000384752 107 ntBASIC2.12□□□□□ -2.07
SF3B6Q9Y3B4 AC244636.1-201ENST00000421152 228 ntBASIC2.12□□□□□ -2.07
SF3B6Q9Y3B4 HMGN1P33-201ENST00000432945 451 ntBASIC2.12□□□□□ -2.07
SF3B6Q9Y3B4 AL513328.1-201ENST00000446460 224 ntBASIC2.12□□□□□ -2.07
SF3B6Q9Y3B4 RNU7-113P-201ENST00000459273 62 ntBASIC2.12□□□□□ -2.07
SF3B6Q9Y3B4 IGKV3-31-201ENST00000523109 329 ntBASIC2.12□□□□□ -2.07
SF3B6Q9Y3B4 MIR3152-201ENST00000579801 74 ntBASIC2.12□□□□□ -2.07
SF3B6Q9Y3B4 MIR4764-201ENST00000580680 88 ntBASIC2.12□□□□□ -2.07
SF3B6Q9Y3B4 AL020996.3-201ENST00000606617 222 ntBASIC2.12□□□□□ -2.07
SF3B6Q9Y3B4 MIR6717-201ENST00000622747 73 ntBASIC2.12□□□□□ -2.07
SF3B6Q9Y3B4 AC016717.2-201ENST00000609089 5141 ntBASIC2.12□□□□□ -2.07
SF3B6Q9Y3B4 RNU6-1014P-201ENST00000383940 103 ntBASIC2.11□□□□□ -2.07
SF3B6Q9Y3B4 MIR520C-201ENST00000385005 87 ntBASIC2.11□□□□□ -2.07
SF3B6Q9Y3B4 AC108938.1-201ENST00000451204 136 ntBASIC2.11□□□□□ -2.07
SF3B6Q9Y3B4 SNORA59A-201ENST00000459326 152 ntBASIC2.11□□□□□ -2.07
SF3B6Q9Y3B4 RPL39P34-201ENST00000477141 156 ntBASIC2.11□□□□□ -2.07
SF3B6Q9Y3B4 RNU7-43P-201ENST00000516554 64 ntBASIC2.11□□□□□ -2.07
SF3B6Q9Y3B4 DNAJC19P9-201ENST00000555084 351 ntBASIC2.11□□□□□ -2.07
SF3B6Q9Y3B4 AC022254.1-201ENST00000567857 235 ntBASIC2.11□□□□□ -2.07
SF3B6Q9Y3B4 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.11□□□□□ -2.07
SF3B6Q9Y3B4 AC008133.2-201ENST00000624540 351 ntBASIC2.11□□□□□ -2.07
SF3B6Q9Y3B4 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 230.3 ms