Protein–RNA interactions for Protein: Q9Y2R2

PTPN22, Tyrosine-protein phosphatase non-receptor type 22, humanhuman

Predictions only

Length 807 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22Q9Y2R2 MIR548O-201ENST00000408583 114 ntBASIC2.31□□□□□ -2.04
PTPN22Q9Y2R2 RNA5SP136-201ENST00000410906 107 ntBASIC2.31□□□□□ -2.04
PTPN22Q9Y2R2 AL445685.2-201ENST00000422551 342 ntBASIC2.31□□□□□ -2.04
PTPN22Q9Y2R2 AC245047.3-201ENST00000429428 127 ntBASIC2.31□□□□□ -2.04
PTPN22Q9Y2R2 HMGN2P32-201ENST00000444648 269 ntBASIC2.31□□□□□ -2.04
PTPN22Q9Y2R2 RPS26P48-201ENST00000491713 339 ntBASIC2.31□□□□□ -2.04
PTPN22Q9Y2R2 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.31□□□□□ -2.04
PTPN22Q9Y2R2 RNVU1-2-201ENST00000516326 135 ntBASIC2.31□□□□□ -2.04
PTPN22Q9Y2R2 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.31□□□□□ -2.04
PTPN22Q9Y2R2 UGP2-230ENST00000626380 276 ntTSL 5 BASIC2.31□□□□□ -2.04
PTPN22Q9Y2R2 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
PTPN22Q9Y2R2 AL442644.1-201ENST00000454390 3105 ntBASIC2.3□□□□□ -2.04
PTPN22Q9Y2R2 SNORD68-201ENST00000363214 84 ntBASIC2.3□□□□□ -2.04
PTPN22Q9Y2R2 RNU6-268P-201ENST00000364174 107 ntBASIC2.3□□□□□ -2.04
PTPN22Q9Y2R2 MIR520A-201ENST00000384862 85 ntBASIC2.3□□□□□ -2.04
PTPN22Q9Y2R2 MIR144-201ENST00000384886 86 ntBASIC2.3□□□□□ -2.04
PTPN22Q9Y2R2 IGKV1-22-201ENST00000524313 326 ntBASIC2.3□□□□□ -2.04
PTPN22Q9Y2R2 MIR6895-201ENST00000613497 78 ntBASIC2.3□□□□□ -2.04
PTPN22Q9Y2R2 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2.3□□□□□ -2.04
PTPN22Q9Y2R2 AL121890.5-201ENST00000620848 304 ntBASIC2.3□□□□□ -2.04
PTPN22Q9Y2R2 MTND5P18-201ENST00000445624 1801 ntBASIC2.3□□□□□ -2.04
PTPN22Q9Y2R2 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
PTPN22Q9Y2R2 MIR17-201ENST00000385012 84 ntBASIC2.29□□□□□ -2.04
PTPN22Q9Y2R2 AL606517.2-201ENST00000442855 241 ntBASIC2.29□□□□□ -2.04
PTPN22Q9Y2R2 Y_RNA.649-201ENST00000459077 103 ntBASIC2.29□□□□□ -2.04
PTPN22Q9Y2R2 SNORD45.4-201ENST00000516629 73 ntBASIC2.29□□□□□ -2.04
PTPN22Q9Y2R2 AC121758.2-201ENST00000553271 193 ntBASIC2.29□□□□□ -2.04
PTPN22Q9Y2R2 MIR5694-201ENST00000581190 76 ntBASIC2.29□□□□□ -2.04
PTPN22Q9Y2R2 MIR376A2-201ENST00000636782 80 ntBASIC2.29□□□□□ -2.04
PTPN22Q9Y2R2 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
PTPN22Q9Y2R2 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
PTPN22Q9Y2R2 RNU6-1084P-201ENST00000362498 107 ntBASIC2.28□□□□□ -2.04
PTPN22Q9Y2R2 Y_RNA.35-201ENST00000362601 101 ntBASIC2.28□□□□□ -2.04
PTPN22Q9Y2R2 SNORD115-28-201ENST00000363931 81 ntBASIC2.28□□□□□ -2.04
PTPN22Q9Y2R2 SNORA22-201ENST00000383907 134 ntBASIC2.28□□□□□ -2.04
PTPN22Q9Y2R2 RNU6-1189P-201ENST00000383958 107 ntBASIC2.28□□□□□ -2.04
PTPN22Q9Y2R2 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
PTPN22Q9Y2R2 SNORA25.15-201ENST00000516487 89 ntBASIC2.28□□□□□ -2.04
PTPN22Q9Y2R2 IGLV3-17-201ENST00000519099 244 ntBASIC2.28□□□□□ -2.04
PTPN22Q9Y2R2 SNORA28-201ENST00000606769 126 ntBASIC2.28□□□□□ -2.04
PTPN22Q9Y2R2 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.05
PTPN22Q9Y2R2 Y_RNA.37-201ENST00000362606 108 ntBASIC2.27□□□□□ -2.05
PTPN22Q9Y2R2 Y_RNA.224-201ENST00000364308 111 ntBASIC2.27□□□□□ -2.05
PTPN22Q9Y2R2 SNORA16B-201ENST00000364674 135 ntBASIC2.27□□□□□ -2.05
PTPN22Q9Y2R2 Y_RNA.265-201ENST00000364677 108 ntBASIC2.27□□□□□ -2.05
PTPN22Q9Y2R2 RNU6-950P-201ENST00000384651 107 ntBASIC2.27□□□□□ -2.05
PTPN22Q9Y2R2 Y_RNA.547-201ENST00000384654 119 ntBASIC2.27□□□□□ -2.05
PTPN22Q9Y2R2 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.27□□□□□ -2.05
PTPN22Q9Y2R2 AC087499.4-201ENST00000448505 178 ntBASIC2.27□□□□□ -2.05
PTPN22Q9Y2R2 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC2.27□□□□□ -2.05
PTPN22Q9Y2R2 COX6CP6-201ENST00000490840 228 ntBASIC2.27□□□□□ -2.05
PTPN22Q9Y2R2 RNU7-25P-201ENST00000516544 62 ntBASIC2.27□□□□□ -2.05
PTPN22Q9Y2R2 AC084364.2-201ENST00000546924 395 ntBASIC2.27□□□□□ -2.05
PTPN22Q9Y2R2 MIR3613-201ENST00000579844 87 ntBASIC2.27□□□□□ -2.05
PTPN22Q9Y2R2 MIR8054-201ENST00000620877 86 ntBASIC2.27□□□□□ -2.05
PTPN22Q9Y2R2 AC027279.3-201ENST00000625055 122 ntBASIC2.27□□□□□ -2.05
PTPN22Q9Y2R2 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
PTPN22Q9Y2R2 AL391516.1-201ENST00000554380 2449 ntBASIC2.26□□□□□ -2.05
PTPN22Q9Y2R2 RNU6-440P-201ENST00000390882 105 ntBASIC2.26□□□□□ -2.05
PTPN22Q9Y2R2 RNA5SP109-201ENST00000391010 116 ntBASIC2.26□□□□□ -2.05
PTPN22Q9Y2R2 CALM2P4-201ENST00000430810 426 ntBASIC2.26□□□□□ -2.05
PTPN22Q9Y2R2 RNA5SP481-201ENST00000516814 122 ntBASIC2.26□□□□□ -2.05
PTPN22Q9Y2R2 SUB1P4-201ENST00000566062 339 ntBASIC2.26□□□□□ -2.05
PTPN22Q9Y2R2 SNORA4-201ENST00000584302 138 ntBASIC2.26□□□□□ -2.05
PTPN22Q9Y2R2 AL773524.1-201ENST00000614065 229 ntBASIC2.26□□□□□ -2.05
PTPN22Q9Y2R2 AL137067.1-201ENST00000615933 120 ntBASIC2.26□□□□□ -2.05
PTPN22Q9Y2R2 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
PTPN22Q9Y2R2 Y_RNA.281-201ENST00000364774 94 ntBASIC2.25□□□□□ -2.05
PTPN22Q9Y2R2 Y_RNA.528-201ENST00000384575 108 ntBASIC2.25□□□□□ -2.05
PTPN22Q9Y2R2 MIR570-201ENST00000384917 97 ntBASIC2.25□□□□□ -2.05
PTPN22Q9Y2R2 AC244636.1-201ENST00000421152 228 ntBASIC2.25□□□□□ -2.05
PTPN22Q9Y2R2 RNU6-830P-201ENST00000516353 107 ntBASIC2.25□□□□□ -2.05
PTPN22Q9Y2R2 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.25□□□□□ -2.05
PTPN22Q9Y2R2 MIR6840-201ENST00000611937 71 ntBASIC2.25□□□□□ -2.05
PTPN22Q9Y2R2 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.25□□□□□ -2.05
PTPN22Q9Y2R2 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
PTPN22Q9Y2R2 MIRLET7C-201ENST00000362160 84 ntBASIC2.24□□□□□ -2.05
PTPN22Q9Y2R2 SNORA63D-201ENST00000364359 132 ntBASIC2.24□□□□□ -2.05
PTPN22Q9Y2R2 SNORA2.2-201ENST00000365473 135 ntBASIC2.24□□□□□ -2.05
PTPN22Q9Y2R2 RNU6-147P-201ENST00000383983 107 ntBASIC2.24□□□□□ -2.05
PTPN22Q9Y2R2 RNU6-938P-201ENST00000411285 103 ntBASIC2.24□□□□□ -2.05
PTPN22Q9Y2R2 RNU6-717P-201ENST00000459076 104 ntBASIC2.24□□□□□ -2.05
PTPN22Q9Y2R2 RNA5SP233-201ENST00000459153 113 ntBASIC2.24□□□□□ -2.05
PTPN22Q9Y2R2 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.24□□□□□ -2.05
PTPN22Q9Y2R2 MIR5002-201ENST00000584713 97 ntBASIC2.24□□□□□ -2.05
PTPN22Q9Y2R2 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.24□□□□□ -2.05
PTPN22Q9Y2R2 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
PTPN22Q9Y2R2 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
PTPN22Q9Y2R2 Y_RNA.366-201ENST00000365540 102 ntBASIC2.23□□□□□ -2.05
PTPN22Q9Y2R2 Y_RNA.440-201ENST00000384120 114 ntBASIC2.23□□□□□ -2.05
PTPN22Q9Y2R2 AL627390.1-201ENST00000396055 340 ntBASIC2.23□□□□□ -2.05
PTPN22Q9Y2R2 MIR1263-201ENST00000408324 86 ntBASIC2.23□□□□□ -2.05
PTPN22Q9Y2R2 AC090255.1-201ENST00000495779 349 ntBASIC2.23□□□□□ -2.05
PTPN22Q9Y2R2 RNU6-412P-201ENST00000516434 106 ntBASIC2.23□□□□□ -2.05
PTPN22Q9Y2R2 SNORA31.10-201ENST00000516482 106 ntBASIC2.23□□□□□ -2.05
PTPN22Q9Y2R2 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.23□□□□□ -2.05
PTPN22Q9Y2R2 BX248123.2-201ENST00000606318 124 ntBASIC2.23□□□□□ -2.05
PTPN22Q9Y2R2 AP000553.5-201ENST00000641933 54 ntBASIC2.23□□□□□ -2.05
PTPN22Q9Y2R2 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
PTPN22Q9Y2R2 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 344.8 ms