Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 U6.108-201ENST00000637764 58 ntBASIC3.65□□□□□ -1.83
PDZRN3Q9UPQ7 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
PDZRN3Q9UPQ7 RNU5F-1-201ENST00000362507 117 ntBASIC3.64□□□□□ -1.83
PDZRN3Q9UPQ7 SNORA80E-201ENST00000384744 137 ntBASIC3.64□□□□□ -1.83
PDZRN3Q9UPQ7 MIR206-201ENST00000384872 86 ntBASIC3.64□□□□□ -1.83
PDZRN3Q9UPQ7 MIR1261-201ENST00000408659 82 ntBASIC3.64□□□□□ -1.83
PDZRN3Q9UPQ7 AC093423.1-201ENST00000440817 142 ntBASIC3.64□□□□□ -1.83
PDZRN3Q9UPQ7 SNORD109B-201ENST00000458961 67 ntBASIC3.64□□□□□ -1.83
PDZRN3Q9UPQ7 SNORD109A-201ENST00000459128 67 ntBASIC3.64□□□□□ -1.83
PDZRN3Q9UPQ7 RNU6-826P-201ENST00000516827 104 ntBASIC3.64□□□□□ -1.83
PDZRN3Q9UPQ7 SNORA31.21-201ENST00000517180 77 ntBASIC3.64□□□□□ -1.83
PDZRN3Q9UPQ7 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.63□□□□□ -1.83
PDZRN3Q9UPQ7 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
PDZRN3Q9UPQ7 SNORD115-34-201ENST00000362441 82 ntBASIC3.63□□□□□ -1.83
PDZRN3Q9UPQ7 SNORD115-12-201ENST00000362583 82 ntBASIC3.63□□□□□ -1.83
PDZRN3Q9UPQ7 SNORD115-29-201ENST00000362834 82 ntBASIC3.63□□□□□ -1.83
PDZRN3Q9UPQ7 SNORD115-9-201ENST00000362912 82 ntBASIC3.63□□□□□ -1.83
PDZRN3Q9UPQ7 SNORD115-21-201ENST00000362963 81 ntBASIC3.63□□□□□ -1.83
PDZRN3Q9UPQ7 SNORD115-41-201ENST00000363608 82 ntBASIC3.63□□□□□ -1.83
PDZRN3Q9UPQ7 SNORD115-11-201ENST00000363616 82 ntBASIC3.63□□□□□ -1.83
PDZRN3Q9UPQ7 SNORD115-5-201ENST00000363633 82 ntBASIC3.63□□□□□ -1.83
PDZRN3Q9UPQ7 SNORD115-4-201ENST00000363810 82 ntBASIC3.63□□□□□ -1.83
PDZRN3Q9UPQ7 SNORD115-6-201ENST00000363942 82 ntBASIC3.63□□□□□ -1.83
PDZRN3Q9UPQ7 SNORD115-42-201ENST00000364273 82 ntBASIC3.63□□□□□ -1.83
PDZRN3Q9UPQ7 SNORD115-15-201ENST00000364809 81 ntBASIC3.63□□□□□ -1.83
PDZRN3Q9UPQ7 SNORD115-26-201ENST00000365067 82 ntBASIC3.63□□□□□ -1.83
PDZRN3Q9UPQ7 SNORD115-10-201ENST00000365073 81 ntBASIC3.63□□□□□ -1.83
PDZRN3Q9UPQ7 SNORD115-43-201ENST00000365503 82 ntBASIC3.63□□□□□ -1.83
PDZRN3Q9UPQ7 SNORD115-36-201ENST00000365629 82 ntBASIC3.63□□□□□ -1.83
PDZRN3Q9UPQ7 MIR196B-201ENST00000384852 84 ntBASIC3.63□□□□□ -1.83
PDZRN3Q9UPQ7 RNU6-1190P-201ENST00000410811 104 ntBASIC3.63□□□□□ -1.83
PDZRN3Q9UPQ7 AC097463.2-201ENST00000421074 142 ntBASIC3.63□□□□□ -1.83
PDZRN3Q9UPQ7 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC3.63□□□□□ -1.83
PDZRN3Q9UPQ7 SNORD4B-201ENST00000459083 72 ntBASIC3.63□□□□□ -1.83
PDZRN3Q9UPQ7 RNU7-23P-201ENST00000459465 62 ntBASIC3.63□□□□□ -1.83
PDZRN3Q9UPQ7 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.63□□□□□ -1.83
PDZRN3Q9UPQ7 ICE2P2-201ENST00000483823 2787 ntBASIC3.63□□□□□ -1.83
PDZRN3Q9UPQ7 AC009487.2-201ENST00000420969 6821 ntBASIC3.62□□□□□ -1.83
PDZRN3Q9UPQ7 Y_RNA.168-201ENST00000363740 102 ntBASIC3.62□□□□□ -1.83
PDZRN3Q9UPQ7 RNU6-614P-201ENST00000384369 107 ntBASIC3.62□□□□□ -1.83
PDZRN3Q9UPQ7 RNA5SP467-201ENST00000391274 118 ntBASIC3.62□□□□□ -1.83
PDZRN3Q9UPQ7 SPINT5P-201ENST00000448174 155 ntBASIC3.62□□□□□ -1.83
PDZRN3Q9UPQ7 RNU6-1108P-201ENST00000516308 104 ntBASIC3.62□□□□□ -1.83
PDZRN3Q9UPQ7 AC005520.4-201ENST00000604337 90 ntBASIC3.62□□□□□ -1.83
PDZRN3Q9UPQ7 U6.59-201ENST00000615686 107 ntBASIC3.62□□□□□ -1.83
PDZRN3Q9UPQ7 MIR1248-201ENST00000629190 106 ntBASIC3.62□□□□□ -1.83
PDZRN3Q9UPQ7 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
PDZRN3Q9UPQ7 RNU6-663P-201ENST00000391105 106 ntBASIC3.61□□□□□ -1.83
PDZRN3Q9UPQ7 SNORA26.6-201ENST00000391256 115 ntBASIC3.61□□□□□ -1.83
PDZRN3Q9UPQ7 SNORA4.4-201ENST00000515921 135 ntBASIC3.61□□□□□ -1.83
PDZRN3Q9UPQ7 Y_RNA.660-201ENST00000516002 120 ntBASIC3.61□□□□□ -1.83
PDZRN3Q9UPQ7 FAM106DP-201ENST00000586416 501 ntBASIC3.61□□□□□ -1.83
PDZRN3Q9UPQ7 uc_338.14-201ENST00000613162 166 ntBASIC3.61□□□□□ -1.83
PDZRN3Q9UPQ7 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC3.61□□□□□ -1.83
PDZRN3Q9UPQ7 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
PDZRN3Q9UPQ7 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.61□□□□□ -1.83
PDZRN3Q9UPQ7 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
PDZRN3Q9UPQ7 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.61□□□□□ -1.83
PDZRN3Q9UPQ7 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PDZRN3Q9UPQ7 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC3.6□□□□□ -1.83
PDZRN3Q9UPQ7 snoU2-30.2-201ENST00000362805 70 ntBASIC3.6□□□□□ -1.83
PDZRN3Q9UPQ7 RNU1-105P-201ENST00000363470 161 ntBASIC3.6□□□□□ -1.83
PDZRN3Q9UPQ7 SNORD115-31-201ENST00000365318 82 ntBASIC3.6□□□□□ -1.83
PDZRN3Q9UPQ7 MIR635-201ENST00000384830 98 ntBASIC3.6□□□□□ -1.83
PDZRN3Q9UPQ7 Y_RNA.596-201ENST00000410462 109 ntBASIC3.6□□□□□ -1.83
PDZRN3Q9UPQ7 AL513328.1-201ENST00000446460 224 ntBASIC3.6□□□□□ -1.83
PDZRN3Q9UPQ7 AC079600.2-201ENST00000550076 130 ntBASIC3.6□□□□□ -1.83
PDZRN3Q9UPQ7 MIR3152-201ENST00000579801 74 ntBASIC3.6□□□□□ -1.83
PDZRN3Q9UPQ7 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
PDZRN3Q9UPQ7 MIR340-201ENST00000362125 95 ntBASIC3.59□□□□□ -1.83
PDZRN3Q9UPQ7 RNU6-859P-201ENST00000362728 107 ntBASIC3.59□□□□□ -1.83
PDZRN3Q9UPQ7 RNA5SP133-201ENST00000363368 119 ntBASIC3.59□□□□□ -1.83
PDZRN3Q9UPQ7 SNORA2B-201ENST00000384583 137 ntBASIC3.59□□□□□ -1.83
PDZRN3Q9UPQ7 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.59□□□□□ -1.83
PDZRN3Q9UPQ7 UBL5P3-201ENST00000475112 231 ntBASIC3.59□□□□□ -1.83
PDZRN3Q9UPQ7 TRBV12-1-201ENST00000479785 344 ntBASIC3.59□□□□□ -1.83
PDZRN3Q9UPQ7 RNU6-807P-201ENST00000516805 107 ntBASIC3.59□□□□□ -1.83
PDZRN3Q9UPQ7 RNU7-156P-201ENST00000517214 74 ntBASIC3.59□□□□□ -1.83
PDZRN3Q9UPQ7 AC012676.2-201ENST00000619258 186 ntBASIC3.59□□□□□ -1.83
PDZRN3Q9UPQ7 MIR1297-201ENST00000637311 77 ntBASIC3.59□□□□□ -1.83
PDZRN3Q9UPQ7 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
PDZRN3Q9UPQ7 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.59□□□□□ -1.84
PDZRN3Q9UPQ7 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
PDZRN3Q9UPQ7 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PDZRN3Q9UPQ7 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC3.58□□□□□ -1.84
PDZRN3Q9UPQ7 SNORA70B-201ENST00000384210 135 ntBASIC3.58□□□□□ -1.84
PDZRN3Q9UPQ7 RNU6-480P-201ENST00000384332 107 ntBASIC3.58□□□□□ -1.84
PDZRN3Q9UPQ7 MIR520H-201ENST00000385126 88 ntBASIC3.58□□□□□ -1.84
PDZRN3Q9UPQ7 Z98742.2-201ENST00000431564 187 ntBASIC3.58□□□□□ -1.84
PDZRN3Q9UPQ7 FGF7P7-201ENST00000514120 227 ntBASIC3.58□□□□□ -1.84
PDZRN3Q9UPQ7 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
PDZRN3Q9UPQ7 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
PDZRN3Q9UPQ7 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
PDZRN3Q9UPQ7 Y_RNA.508-201ENST00000384502 114 ntBASIC3.57□□□□□ -1.84
PDZRN3Q9UPQ7 MIR512-1-201ENST00000384913 84 ntBASIC3.57□□□□□ -1.84
PDZRN3Q9UPQ7 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.57□□□□□ -1.84
PDZRN3Q9UPQ7 Z96811.1-201ENST00000445880 108 ntBASIC3.57□□□□□ -1.84
PDZRN3Q9UPQ7 RNU6-237P-201ENST00000515985 71 ntBASIC3.57□□□□□ -1.84
PDZRN3Q9UPQ7 RNU6-965P-201ENST00000516721 96 ntBASIC3.57□□□□□ -1.84
PDZRN3Q9UPQ7 MIR4796-201ENST00000580742 81 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 222.1 ms