Protein–RNA interactions for Protein: Q9UKV0

HDAC9, Histone deacetylase 9, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9Q9UKV0 RNA5SP153-201ENST00000516498 76 ntBASIC1.77□□□□□ -2.13
HDAC9Q9UKV0 RNU6-197P-201ENST00000516680 100 ntBASIC1.77□□□□□ -2.13
HDAC9Q9UKV0 RNU6-126P-201ENST00000516685 103 ntBASIC1.77□□□□□ -2.13
HDAC9Q9UKV0 AC090142.3-201ENST00000519012 385 ntBASIC1.77□□□□□ -2.13
HDAC9Q9UKV0 AP000648.3-201ENST00000623539 4507 ntBASIC1.76□□□□□ -2.13
HDAC9Q9UKV0 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.76□□□□□ -2.13
HDAC9Q9UKV0 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
HDAC9Q9UKV0 Y_RNA.23-201ENST00000362496 106 ntBASIC1.76□□□□□ -2.13
HDAC9Q9UKV0 Y_RNA.66-201ENST00000362862 102 ntBASIC1.76□□□□□ -2.13
HDAC9Q9UKV0 RNU6-997P-201ENST00000384725 107 ntBASIC1.76□□□□□ -2.13
HDAC9Q9UKV0 MIR452-201ENST00000385020 85 ntBASIC1.76□□□□□ -2.13
HDAC9Q9UKV0 MIR802-201ENST00000390235 94 ntBASIC1.76□□□□□ -2.13
HDAC9Q9UKV0 POLR2J4-204ENST00000418424 324 ntBASIC1.76□□□□□ -2.13
HDAC9Q9UKV0 AC015922.2-201ENST00000435593 184 ntBASIC1.76□□□□□ -2.13
HDAC9Q9UKV0 AC027119.1-201ENST00000440877 241 ntBASIC1.76□□□□□ -2.13
HDAC9Q9UKV0 RPS29P1-201ENST00000465274 159 ntBASIC1.76□□□□□ -2.13
HDAC9Q9UKV0 RNU6-917P-201ENST00000516294 104 ntBASIC1.76□□□□□ -2.13
HDAC9Q9UKV0 AC106754.2-201ENST00000623006 233 ntBASIC1.76□□□□□ -2.13
HDAC9Q9UKV0 RNU6-312P-201ENST00000364629 107 ntBASIC1.75□□□□□ -2.13
HDAC9Q9UKV0 RNA5SP259-201ENST00000365541 109 ntBASIC1.75□□□□□ -2.13
HDAC9Q9UKV0 MIR653-201ENST00000385279 96 ntBASIC1.75□□□□□ -2.13
HDAC9Q9UKV0 PCNPP3-201ENST00000393579 471 ntBASIC1.75□□□□□ -2.13
HDAC9Q9UKV0 AC079140.2-201ENST00000506193 142 ntBASIC1.75□□□□□ -2.13
HDAC9Q9UKV0 Y_RNA.666-201ENST00000516187 112 ntBASIC1.75□□□□□ -2.13
HDAC9Q9UKV0 AC019176.1-201ENST00000518519 225 ntBASIC1.75□□□□□ -2.13
HDAC9Q9UKV0 AC098479.1-201ENST00000609225 154 ntBASIC1.75□□□□□ -2.13
HDAC9Q9UKV0 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.75□□□□□ -2.13
HDAC9Q9UKV0 MIR520E-201ENST00000384867 87 ntBASIC1.74□□□□□ -2.13
HDAC9Q9UKV0 MIR548A2-201ENST00000384956 97 ntBASIC1.74□□□□□ -2.13
HDAC9Q9UKV0 RNU5E-9P-201ENST00000411164 104 ntBASIC1.74□□□□□ -2.13
HDAC9Q9UKV0 AC023790.1-201ENST00000482174 347 ntBASIC1.74□□□□□ -2.13
HDAC9Q9UKV0 AC074198.2-201ENST00000508153 258 ntBASIC1.74□□□□□ -2.13
HDAC9Q9UKV0 MIR4431-201ENST00000579990 94 ntBASIC1.74□□□□□ -2.13
HDAC9Q9UKV0 FAM106DP-201ENST00000586416 501 ntBASIC1.74□□□□□ -2.13
HDAC9Q9UKV0 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
HDAC9Q9UKV0 AP001485.1-201ENST00000604799 199 ntBASIC1.74□□□□□ -2.13
HDAC9Q9UKV0 AL121890.5-201ENST00000620848 304 ntBASIC1.74□□□□□ -2.13
HDAC9Q9UKV0 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.73□□□□□ -2.13
HDAC9Q9UKV0 SNORD24-201ENST00000383884 75 ntBASIC1.73□□□□□ -2.13
HDAC9Q9UKV0 RNU6-643P-201ENST00000384018 107 ntBASIC1.73□□□□□ -2.13
HDAC9Q9UKV0 MIR516B2-201ENST00000385190 85 ntBASIC1.73□□□□□ -2.13
HDAC9Q9UKV0 SNORA26-201ENST00000391286 122 ntBASIC1.73□□□□□ -2.13
HDAC9Q9UKV0 RNU2-70P-201ENST00000410718 179 ntBASIC1.73□□□□□ -2.13
HDAC9Q9UKV0 SEPT7P4-201ENST00000437076 306 ntBASIC1.73□□□□□ -2.13
HDAC9Q9UKV0 SNRPGP13-201ENST00000442212 177 ntBASIC1.73□□□□□ -2.13
HDAC9Q9UKV0 RNU6-830P-201ENST00000516353 107 ntBASIC1.73□□□□□ -2.13
HDAC9Q9UKV0 RNU6-365P-201ENST00000517113 106 ntBASIC1.73□□□□□ -2.13
HDAC9Q9UKV0 AC007751.1-201ENST00000529260 376 ntBASIC1.73□□□□□ -2.13
HDAC9Q9UKV0 MIR3937-201ENST00000580135 106 ntBASIC1.73□□□□□ -2.13
HDAC9Q9UKV0 U8.1-201ENST00000362843 134 ntBASIC1.72□□□□□ -2.13
HDAC9Q9UKV0 SNORA2.2-201ENST00000365473 135 ntBASIC1.72□□□□□ -2.13
HDAC9Q9UKV0 SNORD61-201ENST00000384252 73 ntBASIC1.72□□□□□ -2.13
HDAC9Q9UKV0 RNU6-886P-201ENST00000384319 105 ntBASIC1.72□□□□□ -2.13
HDAC9Q9UKV0 SNORD38C-201ENST00000384381 69 ntBASIC1.72□□□□□ -2.13
HDAC9Q9UKV0 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.72□□□□□ -2.13
HDAC9Q9UKV0 MIR548O-201ENST00000408583 114 ntBASIC1.72□□□□□ -2.13
HDAC9Q9UKV0 Y_RNA.662-201ENST00000516028 97 ntBASIC1.72□□□□□ -2.13
HDAC9Q9UKV0 RNU7-25P-201ENST00000516544 62 ntBASIC1.72□□□□□ -2.13
HDAC9Q9UKV0 AC090049.2-201ENST00000550377 109 ntBASIC1.72□□□□□ -2.13
HDAC9Q9UKV0 MIR151B-201ENST00000584249 96 ntBASIC1.72□□□□□ -2.13
HDAC9Q9UKV0 AL365434.2-201ENST00000607979 234 ntBASIC1.72□□□□□ -2.13
HDAC9Q9UKV0 RNU6-888P-201ENST00000363010 101 ntBASIC1.71□□□□□ -2.14
HDAC9Q9UKV0 Y_RNA.150-201ENST00000363562 102 ntBASIC1.71□□□□□ -2.14
HDAC9Q9UKV0 RNU1-93P-201ENST00000364704 169 ntBASIC1.71□□□□□ -2.14
HDAC9Q9UKV0 Y_RNA.441-201ENST00000384123 112 ntBASIC1.71□□□□□ -2.14
HDAC9Q9UKV0 Y_RNA.555-201ENST00000384673 110 ntBASIC1.71□□□□□ -2.14
HDAC9Q9UKV0 MIR518F-201ENST00000384973 87 ntBASIC1.71□□□□□ -2.14
HDAC9Q9UKV0 MT-TR-201ENST00000387439 65 ntBASIC1.71□□□□□ -2.14
HDAC9Q9UKV0 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.71□□□□□ -2.14
HDAC9Q9UKV0 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.71□□□□□ -2.14
HDAC9Q9UKV0 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.71□□□□□ -2.14
HDAC9Q9UKV0 RNU6-978P-201ENST00000364371 103 ntBASIC1.7□□□□□ -2.14
HDAC9Q9UKV0 SNORD26-201ENST00000384147 75 ntBASIC1.7□□□□□ -2.14
HDAC9Q9UKV0 RNU6-1065P-201ENST00000384513 106 ntBASIC1.7□□□□□ -2.14
HDAC9Q9UKV0 Y_RNA.547-201ENST00000384654 119 ntBASIC1.7□□□□□ -2.14
HDAC9Q9UKV0 MIR136-201ENST00000385207 82 ntBASIC1.7□□□□□ -2.14
HDAC9Q9UKV0 SNORD41-201ENST00000386967 70 ntBASIC1.7□□□□□ -2.14
HDAC9Q9UKV0 SNORA79-201ENST00000408376 140 ntBASIC1.7□□□□□ -2.14
HDAC9Q9UKV0 RPS27P16-201ENST00000425758 201 ntBASIC1.7□□□□□ -2.14
HDAC9Q9UKV0 RPS29P23-201ENST00000458635 123 ntBASIC1.7□□□□□ -2.14
HDAC9Q9UKV0 RNU4-57P-201ENST00000515980 135 ntBASIC1.7□□□□□ -2.14
HDAC9Q9UKV0 RNU6-504P-201ENST00000516568 104 ntBASIC1.7□□□□□ -2.14
HDAC9Q9UKV0 MIR6788-201ENST00000618842 66 ntBASIC1.7□□□□□ -2.14
HDAC9Q9UKV0 AC015726.2-201ENST00000620112 122 ntBASIC1.7□□□□□ -2.14
HDAC9Q9UKV0 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.7□□□□□ -2.14
HDAC9Q9UKV0 RNU4-84P-201ENST00000364200 139 ntBASIC1.69□□□□□ -2.14
HDAC9Q9UKV0 Y_RNA.270-201ENST00000364693 104 ntBASIC1.69□□□□□ -2.14
HDAC9Q9UKV0 MIR548I3-201ENST00000408378 149 ntBASIC1.69□□□□□ -2.14
HDAC9Q9UKV0 MIR548I1-201ENST00000408810 149 ntBASIC1.69□□□□□ -2.14
HDAC9Q9UKV0 RNU1-98P-201ENST00000458992 160 ntBASIC1.69□□□□□ -2.14
HDAC9Q9UKV0 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.69□□□□□ -2.14
HDAC9Q9UKV0 RNU6-693P-201ENST00000516134 107 ntBASIC1.69□□□□□ -2.14
HDAC9Q9UKV0 RNU6-1270P-201ENST00000517128 108 ntBASIC1.69□□□□□ -2.14
HDAC9Q9UKV0 MIR378D2-201ENST00000580636 98 ntBASIC1.69□□□□□ -2.14
HDAC9Q9UKV0 AL161722.3-201ENST00000605789 2983 ntBASIC1.68□□□□□ -2.14
HDAC9Q9UKV0 SNORD114-27-201ENST00000363766 70 ntBASIC1.68□□□□□ -2.14
HDAC9Q9UKV0 AC006461.1-201ENST00000412637 326 ntBASIC1.68□□□□□ -2.14
HDAC9Q9UKV0 AL513534.2-201ENST00000603836 250 ntBASIC1.68□□□□□ -2.14
HDAC9Q9UKV0 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
HDAC9Q9UKV0 Y_RNA.393-201ENST00000383936 102 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms