Protein–RNA interactions for Protein: Q9UKS6

PACSIN3, Protein kinase C and casein kinase substrate in neurons protein 3, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3Q9UKS6 RNU1-52P-201ENST00000384190 164 ntBASIC2.03□□□□□ -2.08
PACSIN3Q9UKS6 RNU4-52P-201ENST00000384209 138 ntBASIC2.03□□□□□ -2.08
PACSIN3Q9UKS6 RNA5SP482-201ENST00000391269 118 ntBASIC2.03□□□□□ -2.08
PACSIN3Q9UKS6 SNX2P2-201ENST00000424553 323 ntBASIC2.03□□□□□ -2.08
PACSIN3Q9UKS6 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.03□□□□□ -2.08
PACSIN3Q9UKS6 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.03□□□□□ -2.08
PACSIN3Q9UKS6 SNORA31.4-201ENST00000516049 129 ntBASIC2.03□□□□□ -2.08
PACSIN3Q9UKS6 RNU1-40P-201ENST00000516816 164 ntBASIC2.03□□□□□ -2.08
PACSIN3Q9UKS6 RNU1-97P-201ENST00000516872 164 ntBASIC2.03□□□□□ -2.08
PACSIN3Q9UKS6 IGKV3-31-201ENST00000523109 329 ntBASIC2.03□□□□□ -2.08
PACSIN3Q9UKS6 MIR4448-201ENST00000584360 86 ntBASIC2.03□□□□□ -2.08
PACSIN3Q9UKS6 AC091932.4-201ENST00000623386 200 ntBASIC2.03□□□□□ -2.08
PACSIN3Q9UKS6 MIR203B-201ENST00000636080 86 ntBASIC2.03□□□□□ -2.08
PACSIN3Q9UKS6 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
PACSIN3Q9UKS6 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
PACSIN3Q9UKS6 MIRLET7C-201ENST00000362160 84 ntBASIC2.02□□□□□ -2.09
PACSIN3Q9UKS6 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.02□□□□□ -2.09
PACSIN3Q9UKS6 SNORA40.13-201ENST00000516379 120 ntBASIC2.02□□□□□ -2.09
PACSIN3Q9UKS6 RNA5SP364-201ENST00000516938 78 ntBASIC2.02□□□□□ -2.09
PACSIN3Q9UKS6 RNU6-762P-201ENST00000517107 102 ntBASIC2.02□□□□□ -2.09
PACSIN3Q9UKS6 AC084364.2-201ENST00000546924 395 ntBASIC2.02□□□□□ -2.09
PACSIN3Q9UKS6 MIR4305-201ENST00000583252 102 ntBASIC2.02□□□□□ -2.09
PACSIN3Q9UKS6 AC245884.12-201ENST00000615364 59 ntBASIC2.02□□□□□ -2.09
PACSIN3Q9UKS6 Y_RNA.388-201ENST00000383919 113 ntBASIC2.01□□□□□ -2.09
PACSIN3Q9UKS6 RNU6-163P-201ENST00000384396 106 ntBASIC2.01□□□□□ -2.09
PACSIN3Q9UKS6 RNY1P7-201ENST00000384743 110 ntBASIC2.01□□□□□ -2.09
PACSIN3Q9UKS6 MIR548D2-201ENST00000384955 97 ntBASIC2.01□□□□□ -2.09
PACSIN3Q9UKS6 MIR759-201ENST00000390224 91 ntBASIC2.01□□□□□ -2.09
PACSIN3Q9UKS6 BX510359.4-201ENST00000423750 193 ntBASIC2.01□□□□□ -2.09
PACSIN3Q9UKS6 HMGN2P38-201ENST00000423806 265 ntBASIC2.01□□□□□ -2.09
PACSIN3Q9UKS6 UBL5P3-201ENST00000475112 231 ntBASIC2.01□□□□□ -2.09
PACSIN3Q9UKS6 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.01□□□□□ -2.09
PACSIN3Q9UKS6 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
PACSIN3Q9UKS6 MIR524-201ENST00000385242 87 ntBASIC2□□□□□ -2.09
PACSIN3Q9UKS6 SNORA48.3-201ENST00000391081 134 ntBASIC2□□□□□ -2.09
PACSIN3Q9UKS6 AC087499.4-201ENST00000448505 178 ntBASIC2□□□□□ -2.09
PACSIN3Q9UKS6 snoU13.26-201ENST00000459452 105 ntBASIC2□□□□□ -2.09
PACSIN3Q9UKS6 RNA5SP200-201ENST00000516360 103 ntBASIC2□□□□□ -2.09
PACSIN3Q9UKS6 AC141557.1-201ENST00000540982 400 ntBASIC2□□□□□ -2.09
PACSIN3Q9UKS6 MIR3124-201ENST00000582636 67 ntBASIC2□□□□□ -2.09
PACSIN3Q9UKS6 SNORD14A-201ENST00000606526 91 ntBASIC2□□□□□ -2.09
PACSIN3Q9UKS6 MIR6132-201ENST00000622083 109 ntBASIC2□□□□□ -2.09
PACSIN3Q9UKS6 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2□□□□□ -2.09
PACSIN3Q9UKS6 RNU6-1113P-201ENST00000384348 107 ntBASIC1.99□□□□□ -2.09
PACSIN3Q9UKS6 Y_RNA.544-201ENST00000384650 113 ntBASIC1.99□□□□□ -2.09
PACSIN3Q9UKS6 MIR1302-4-201ENST00000408701 150 ntBASIC1.99□□□□□ -2.09
PACSIN3Q9UKS6 HSPE1P9-201ENST00000440046 311 ntBASIC1.99□□□□□ -2.09
PACSIN3Q9UKS6 RNU7-80P-201ENST00000459562 61 ntBASIC1.99□□□□□ -2.09
PACSIN3Q9UKS6 RNU7-28P-201ENST00000516759 62 ntBASIC1.99□□□□□ -2.09
PACSIN3Q9UKS6 RNU7-6P-201ENST00000516845 62 ntBASIC1.99□□□□□ -2.09
PACSIN3Q9UKS6 RNU7-181P-201ENST00000517234 74 ntBASIC1.99□□□□□ -2.09
PACSIN3Q9UKS6 MIR3126-201ENST00000577443 74 ntBASIC1.99□□□□□ -2.09
PACSIN3Q9UKS6 MIR5094-201ENST00000578766 85 ntBASIC1.99□□□□□ -2.09
PACSIN3Q9UKS6 SNRPGP19-201ENST00000603826 189 ntBASIC1.99□□□□□ -2.09
PACSIN3Q9UKS6 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.99□□□□□ -2.09
PACSIN3Q9UKS6 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC1.99□□□□□ -2.09
PACSIN3Q9UKS6 AL596028.1-201ENST00000326971 197 ntBASIC1.98□□□□□ -2.09
PACSIN3Q9UKS6 Y_RNA.241-201ENST00000364470 117 ntBASIC1.98□□□□□ -2.09
PACSIN3Q9UKS6 SNORA4.2-201ENST00000365313 147 ntBASIC1.98□□□□□ -2.09
PACSIN3Q9UKS6 SNORA27-201ENST00000384323 126 ntBASIC1.98□□□□□ -2.09
PACSIN3Q9UKS6 MIR597-201ENST00000384968 97 ntBASIC1.98□□□□□ -2.09
PACSIN3Q9UKS6 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
PACSIN3Q9UKS6 U8.16-201ENST00000391279 133 ntBASIC1.98□□□□□ -2.09
PACSIN3Q9UKS6 RN7SKP200-201ENST00000410564 320 ntBASIC1.98□□□□□ -2.09
PACSIN3Q9UKS6 RNY4P29-201ENST00000410801 97 ntBASIC1.98□□□□□ -2.09
PACSIN3Q9UKS6 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.98□□□□□ -2.09
PACSIN3Q9UKS6 AL512326.2-201ENST00000426359 151 ntBASIC1.98□□□□□ -2.09
PACSIN3Q9UKS6 RNU6-970P-201ENST00000516312 107 ntBASIC1.98□□□□□ -2.09
PACSIN3Q9UKS6 SCARNA16.3-201ENST00000516595 184 ntBASIC1.98□□□□□ -2.09
PACSIN3Q9UKS6 RNA5SP137-201ENST00000516833 135 ntBASIC1.98□□□□□ -2.09
PACSIN3Q9UKS6 AC026271.5-201ENST00000577873 130 ntBASIC1.98□□□□□ -2.09
PACSIN3Q9UKS6 AL513534.2-201ENST00000603836 250 ntBASIC1.98□□□□□ -2.09
PACSIN3Q9UKS6 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
PACSIN3Q9UKS6 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
PACSIN3Q9UKS6 RNU1-58P-201ENST00000362413 163 ntBASIC1.97□□□□□ -2.09
PACSIN3Q9UKS6 SNORD38C-201ENST00000384381 69 ntBASIC1.97□□□□□ -2.09
PACSIN3Q9UKS6 AL627390.1-201ENST00000396055 340 ntBASIC1.97□□□□□ -2.09
PACSIN3Q9UKS6 SNORA11.4-201ENST00000408823 129 ntBASIC1.97□□□□□ -2.09
PACSIN3Q9UKS6 AC015922.2-201ENST00000435593 184 ntBASIC1.97□□□□□ -2.09
PACSIN3Q9UKS6 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.97□□□□□ -2.09
PACSIN3Q9UKS6 snoU13.15-201ENST00000459407 104 ntBASIC1.97□□□□□ -2.09
PACSIN3Q9UKS6 RNU7-45P-201ENST00000459460 63 ntBASIC1.97□□□□□ -2.09
PACSIN3Q9UKS6 RNU6-904P-201ENST00000516206 101 ntBASIC1.97□□□□□ -2.09
PACSIN3Q9UKS6 MIR3163-201ENST00000581592 73 ntBASIC1.97□□□□□ -2.09
PACSIN3Q9UKS6 MIR3935-201ENST00000583472 104 ntBASIC1.97□□□□□ -2.09
PACSIN3Q9UKS6 AC078899.2-201ENST00000595282 212 ntBASIC1.97□□□□□ -2.09
PACSIN3Q9UKS6 MIR6840-201ENST00000611937 71 ntBASIC1.97□□□□□ -2.09
PACSIN3Q9UKS6 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
PACSIN3Q9UKS6 AL162726.3-218ENST00000636401 95 ntBASIC1.97□□□□□ -2.09
PACSIN3Q9UKS6 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.97□□□□□ -2.09
PACSIN3Q9UKS6 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
PACSIN3Q9UKS6 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
PACSIN3Q9UKS6 SNORA3A-201ENST00000364113 130 ntBASIC1.96□□□□□ -2.1
PACSIN3Q9UKS6 RNU6-816P-201ENST00000390914 107 ntBASIC1.96□□□□□ -2.1
PACSIN3Q9UKS6 SNORA26.2-201ENST00000390922 122 ntBASIC1.96□□□□□ -2.1
PACSIN3Q9UKS6 RNU6-1268P-201ENST00000391214 107 ntBASIC1.96□□□□□ -2.1
PACSIN3Q9UKS6 RNU6-1239P-201ENST00000391310 107 ntBASIC1.96□□□□□ -2.1
PACSIN3Q9UKS6 RPS3AP1-201ENST00000413190 320 ntBASIC1.96□□□□□ -2.1
PACSIN3Q9UKS6 MTATP8P2-201ENST00000435212 202 ntBASIC1.96□□□□□ -2.1
PACSIN3Q9UKS6 RPL39P25-201ENST00000449384 154 ntBASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 185.9 ms