Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 RNU2-40P-201ENST00000410833 196 ntBASIC2.33□□□□□ -2.04
DDX41Q9UJV9 RNU7-80P-201ENST00000459562 61 ntBASIC2.33□□□□□ -2.04
DDX41Q9UJV9 Y_RNA.690-201ENST00000516603 95 ntBASIC2.33□□□□□ -2.04
DDX41Q9UJV9 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.33□□□□□ -2.04
DDX41Q9UJV9 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
DDX41Q9UJV9 AL442644.1-201ENST00000454390 3105 ntBASIC2.32□□□□□ -2.04
DDX41Q9UJV9 SNORD115-34-201ENST00000362441 82 ntBASIC2.32□□□□□ -2.04
DDX41Q9UJV9 SNORD115-12-201ENST00000362583 82 ntBASIC2.32□□□□□ -2.04
DDX41Q9UJV9 SNORD115-29-201ENST00000362834 82 ntBASIC2.32□□□□□ -2.04
DDX41Q9UJV9 SNORD115-9-201ENST00000362912 82 ntBASIC2.32□□□□□ -2.04
DDX41Q9UJV9 SNORD115-21-201ENST00000362963 81 ntBASIC2.32□□□□□ -2.04
DDX41Q9UJV9 SNORD115-14-201ENST00000363090 81 ntBASIC2.32□□□□□ -2.04
DDX41Q9UJV9 SNORD115-13-201ENST00000363358 82 ntBASIC2.32□□□□□ -2.04
DDX41Q9UJV9 SNORD115-41-201ENST00000363608 82 ntBASIC2.32□□□□□ -2.04
DDX41Q9UJV9 SNORD115-11-201ENST00000363616 82 ntBASIC2.32□□□□□ -2.04
DDX41Q9UJV9 SNORD115-5-201ENST00000363633 82 ntBASIC2.32□□□□□ -2.04
DDX41Q9UJV9 SNORD115-39-201ENST00000363694 82 ntBASIC2.32□□□□□ -2.04
DDX41Q9UJV9 RNY1P11-201ENST00000363759 113 ntBASIC2.32□□□□□ -2.04
DDX41Q9UJV9 SNORD115-4-201ENST00000363810 82 ntBASIC2.32□□□□□ -2.04
DDX41Q9UJV9 SNORD115-16-201ENST00000363887 82 ntBASIC2.32□□□□□ -2.04
DDX41Q9UJV9 SNORD115-6-201ENST00000363942 82 ntBASIC2.32□□□□□ -2.04
DDX41Q9UJV9 SNORD115-42-201ENST00000364273 82 ntBASIC2.32□□□□□ -2.04
DDX41Q9UJV9 SNORD115-15-201ENST00000364809 81 ntBASIC2.32□□□□□ -2.04
DDX41Q9UJV9 SNORD115-1-201ENST00000364961 82 ntBASIC2.32□□□□□ -2.04
DDX41Q9UJV9 SNORD115-26-201ENST00000365067 82 ntBASIC2.32□□□□□ -2.04
DDX41Q9UJV9 SNORD115-10-201ENST00000365073 81 ntBASIC2.32□□□□□ -2.04
DDX41Q9UJV9 SNORD115-43-201ENST00000365503 82 ntBASIC2.32□□□□□ -2.04
DDX41Q9UJV9 SNORD115-36-201ENST00000365629 82 ntBASIC2.32□□□□□ -2.04
DDX41Q9UJV9 MIR30A-201ENST00000385092 71 ntBASIC2.32□□□□□ -2.04
DDX41Q9UJV9 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.32□□□□□ -2.04
DDX41Q9UJV9 snoU13.9-201ENST00000458927 103 ntBASIC2.32□□□□□ -2.04
DDX41Q9UJV9 RNU6-1149P-201ENST00000516810 97 ntBASIC2.32□□□□□ -2.04
DDX41Q9UJV9 RNU7-181P-201ENST00000517234 74 ntBASIC2.32□□□□□ -2.04
DDX41Q9UJV9 SNORD115-40-201ENST00000606510 82 ntBASIC2.32□□□□□ -2.04
DDX41Q9UJV9 DLEU2_5.2-201ENST00000610606 84 ntBASIC2.32□□□□□ -2.04
DDX41Q9UJV9 Y_RNA.783-201ENST00000613546 102 ntBASIC2.32□□□□□ -2.04
DDX41Q9UJV9 MTND5P32-201ENST00000560711 1802 ntBASIC2.32□□□□□ -2.04
DDX41Q9UJV9 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC2.32□□□□□ -2.04
DDX41Q9UJV9 Y_RNA.440-201ENST00000384120 114 ntBASIC2.31□□□□□ -2.04
DDX41Q9UJV9 Y_RNA.454-201ENST00000384224 113 ntBASIC2.31□□□□□ -2.04
DDX41Q9UJV9 SNORA27-201ENST00000384323 126 ntBASIC2.31□□□□□ -2.04
DDX41Q9UJV9 AL451046.2-201ENST00000403074 277 ntBASIC2.31□□□□□ -2.04
DDX41Q9UJV9 RNU6-938P-201ENST00000411285 103 ntBASIC2.31□□□□□ -2.04
DDX41Q9UJV9 SNORD123-201ENST00000459473 70 ntBASIC2.31□□□□□ -2.04
DDX41Q9UJV9 AC090049.2-201ENST00000550377 109 ntBASIC2.31□□□□□ -2.04
DDX41Q9UJV9 WWP1P1-201ENST00000466609 2769 ntBASIC2.3□□□□□ -2.04
DDX41Q9UJV9 Y_RNA.351-201ENST00000365436 96 ntBASIC2.3□□□□□ -2.04
DDX41Q9UJV9 Y_RNA.370-201ENST00000365589 108 ntBASIC2.3□□□□□ -2.04
DDX41Q9UJV9 SNORA70.7-201ENST00000384159 133 ntBASIC2.3□□□□□ -2.04
DDX41Q9UJV9 SNORA19-201ENST00000384737 128 ntBASIC2.3□□□□□ -2.04
DDX41Q9UJV9 RNU6-1211P-201ENST00000459179 105 ntBASIC2.3□□□□□ -2.04
DDX41Q9UJV9 RN7SL274P-201ENST00000492268 272 ntBASIC2.3□□□□□ -2.04
DDX41Q9UJV9 RNA5SP458-201ENST00000516188 119 ntBASIC2.3□□□□□ -2.04
DDX41Q9UJV9 Y_RNA.686-201ENST00000516548 134 ntBASIC2.3□□□□□ -2.04
DDX41Q9UJV9 SNORA77B-201ENST00000578179 125 ntBASIC2.3□□□□□ -2.04
DDX41Q9UJV9 SNORA26.9-201ENST00000391322 122 ntBASIC2.29□□□□□ -2.04
DDX41Q9UJV9 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.29□□□□□ -2.04
DDX41Q9UJV9 AL606753.1-201ENST00000427435 87 ntBASIC2.29□□□□□ -2.04
DDX41Q9UJV9 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.29□□□□□ -2.04
DDX41Q9UJV9 AC012493.3-201ENST00000604494 112 ntBASIC2.29□□□□□ -2.04
DDX41Q9UJV9 AC103810.8-201ENST00000607347 118 ntBASIC2.29□□□□□ -2.04
DDX41Q9UJV9 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.29□□□□□ -2.04
DDX41Q9UJV9 AL157777.2-201ENST00000258070 137 ntBASIC2.28□□□□□ -2.04
DDX41Q9UJV9 RNU6-1117P-201ENST00000384525 104 ntBASIC2.28□□□□□ -2.04
DDX41Q9UJV9 RNU6-959P-201ENST00000384671 107 ntBASIC2.28□□□□□ -2.04
DDX41Q9UJV9 MIR653-201ENST00000385279 96 ntBASIC2.28□□□□□ -2.04
DDX41Q9UJV9 RNU5E-3P-201ENST00000515913 68 ntBASIC2.28□□□□□ -2.04
DDX41Q9UJV9 RNU6-917P-201ENST00000516294 104 ntBASIC2.28□□□□□ -2.04
DDX41Q9UJV9 RNU6-295P-201ENST00000516901 104 ntBASIC2.28□□□□□ -2.04
DDX41Q9UJV9 SNORA74.3-201ENST00000517108 154 ntBASIC2.28□□□□□ -2.04
DDX41Q9UJV9 AC090821.2-201ENST00000523552 176 ntBASIC2.28□□□□□ -2.04
DDX41Q9UJV9 AC015688.6-201ENST00000577737 104 ntBASIC2.28□□□□□ -2.04
DDX41Q9UJV9 AL096840.1-201ENST00000603287 93 ntBASIC2.28□□□□□ -2.04
DDX41Q9UJV9 RNU1-133P-201ENST00000364867 167 ntBASIC2.27□□□□□ -2.05
DDX41Q9UJV9 RNU7-96P-201ENST00000459535 64 ntBASIC2.27□□□□□ -2.05
DDX41Q9UJV9 RPS26P48-201ENST00000491713 339 ntBASIC2.27□□□□□ -2.05
DDX41Q9UJV9 Y_RNA.676-201ENST00000516393 96 ntBASIC2.27□□□□□ -2.05
DDX41Q9UJV9 RNU6-62P-201ENST00000516526 102 ntBASIC2.27□□□□□ -2.05
DDX41Q9UJV9 RNU7-43P-201ENST00000516554 64 ntBASIC2.27□□□□□ -2.05
DDX41Q9UJV9 SCARNA15-202ENST00000516881 127 ntBASIC2.27□□□□□ -2.05
DDX41Q9UJV9 RNU6-971P-201ENST00000516920 106 ntBASIC2.27□□□□□ -2.05
DDX41Q9UJV9 AL513534.2-201ENST00000603836 250 ntBASIC2.27□□□□□ -2.05
DDX41Q9UJV9 MIR8063-201ENST00000621930 81 ntBASIC2.27□□□□□ -2.05
DDX41Q9UJV9 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
DDX41Q9UJV9 MIR302B-201ENST00000362188 73 ntBASIC2.26□□□□□ -2.05
DDX41Q9UJV9 SNORD33-201ENST00000362761 85 ntBASIC2.26□□□□□ -2.05
DDX41Q9UJV9 RPS29P24-201ENST00000486345 171 ntBASIC2.26□□□□□ -2.05
DDX41Q9UJV9 MIR3198-2-201ENST00000577868 80 ntBASIC2.26□□□□□ -2.05
DDX41Q9UJV9 MIR548AR-201ENST00000582191 57 ntBASIC2.26□□□□□ -2.05
DDX41Q9UJV9 AL022345.2-201ENST00000606307 135 ntBASIC2.26□□□□□ -2.05
DDX41Q9UJV9 MIR376A2-201ENST00000636782 80 ntBASIC2.26□□□□□ -2.05
DDX41Q9UJV9 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC2.26□□□□□ -2.05
DDX41Q9UJV9 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
DDX41Q9UJV9 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.26□□□□□ -2.05
DDX41Q9UJV9 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
DDX41Q9UJV9 HSPE1P24-201ENST00000450782 238 ntBASIC2.25□□□□□ -2.05
DDX41Q9UJV9 RNA5SP182-201ENST00000516064 82 ntBASIC2.25□□□□□ -2.05
DDX41Q9UJV9 RNU6-113P-201ENST00000516653 101 ntBASIC2.25□□□□□ -2.05
DDX41Q9UJV9 RNU2-60P-201ENST00000517290 128 ntBASIC2.25□□□□□ -2.05
DDX41Q9UJV9 MIR3121-201ENST00000579680 77 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 173.6 ms