Protein–RNA interactions for Protein: Q9UFN0

NIPSNAP3A, Protein NipSnap homolog 3A, humanhuman

Predicted RBP Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP3AQ9UFN0 SNORD115-21-201ENST00000362963 81 ntBASIC1.75□□□□□ -2.13
NIPSNAP3AQ9UFN0 SNORD115-14-201ENST00000363090 81 ntBASIC1.75□□□□□ -2.13
NIPSNAP3AQ9UFN0 SNORD115-13-201ENST00000363358 82 ntBASIC1.75□□□□□ -2.13
NIPSNAP3AQ9UFN0 SNORD115-41-201ENST00000363608 82 ntBASIC1.75□□□□□ -2.13
NIPSNAP3AQ9UFN0 SNORD115-11-201ENST00000363616 82 ntBASIC1.75□□□□□ -2.13
NIPSNAP3AQ9UFN0 SNORD115-5-201ENST00000363633 82 ntBASIC1.75□□□□□ -2.13
NIPSNAP3AQ9UFN0 SNORD115-39-201ENST00000363694 82 ntBASIC1.75□□□□□ -2.13
NIPSNAP3AQ9UFN0 RNY1P11-201ENST00000363759 113 ntBASIC1.75□□□□□ -2.13
NIPSNAP3AQ9UFN0 SNORD115-4-201ENST00000363810 82 ntBASIC1.75□□□□□ -2.13
NIPSNAP3AQ9UFN0 SNORD115-16-201ENST00000363887 82 ntBASIC1.75□□□□□ -2.13
NIPSNAP3AQ9UFN0 SNORD115-6-201ENST00000363942 82 ntBASIC1.75□□□□□ -2.13
NIPSNAP3AQ9UFN0 SNORD115-42-201ENST00000364273 82 ntBASIC1.75□□□□□ -2.13
NIPSNAP3AQ9UFN0 SNORD115-15-201ENST00000364809 81 ntBASIC1.75□□□□□ -2.13
NIPSNAP3AQ9UFN0 SNORD115-1-201ENST00000364961 82 ntBASIC1.75□□□□□ -2.13
NIPSNAP3AQ9UFN0 SNORD115-26-201ENST00000365067 82 ntBASIC1.75□□□□□ -2.13
NIPSNAP3AQ9UFN0 SNORD115-10-201ENST00000365073 81 ntBASIC1.75□□□□□ -2.13
NIPSNAP3AQ9UFN0 SNORD115-43-201ENST00000365503 82 ntBASIC1.75□□□□□ -2.13
NIPSNAP3AQ9UFN0 SNORD115-36-201ENST00000365629 82 ntBASIC1.75□□□□□ -2.13
NIPSNAP3AQ9UFN0 RNU6-1065P-201ENST00000384513 106 ntBASIC1.75□□□□□ -2.13
NIPSNAP3AQ9UFN0 SNORD28B-201ENST00000390993 75 ntBASIC1.75□□□□□ -2.13
NIPSNAP3AQ9UFN0 SNORA40.5-201ENST00000391061 128 ntBASIC1.75□□□□□ -2.13
NIPSNAP3AQ9UFN0 RNA5SP272-201ENST00000516095 111 ntBASIC1.75□□□□□ -2.13
NIPSNAP3AQ9UFN0 MIR4419B-201ENST00000577260 68 ntBASIC1.75□□□□□ -2.13
NIPSNAP3AQ9UFN0 SNORD115-40-201ENST00000606510 82 ntBASIC1.75□□□□□ -2.13
NIPSNAP3AQ9UFN0 Y_RNA.440-201ENST00000384120 114 ntBASIC1.74□□□□□ -2.13
NIPSNAP3AQ9UFN0 SNORA27-201ENST00000384323 126 ntBASIC1.74□□□□□ -2.13
NIPSNAP3AQ9UFN0 MIR520C-201ENST00000385005 87 ntBASIC1.74□□□□□ -2.13
NIPSNAP3AQ9UFN0 SNORD41-201ENST00000386967 70 ntBASIC1.74□□□□□ -2.13
NIPSNAP3AQ9UFN0 RNU6-460P-201ENST00000391158 108 ntBASIC1.74□□□□□ -2.13
NIPSNAP3AQ9UFN0 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
NIPSNAP3AQ9UFN0 RNU6-1149P-201ENST00000516810 97 ntBASIC1.74□□□□□ -2.13
NIPSNAP3AQ9UFN0 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
NIPSNAP3AQ9UFN0 MTND5P32-201ENST00000560711 1802 ntBASIC1.73□□□□□ -2.13
NIPSNAP3AQ9UFN0 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.73□□□□□ -2.13
NIPSNAP3AQ9UFN0 SNORD18B-201ENST00000365659 72 ntBASIC1.73□□□□□ -2.13
NIPSNAP3AQ9UFN0 Y_RNA.494-201ENST00000384432 111 ntBASIC1.73□□□□□ -2.13
NIPSNAP3AQ9UFN0 SNORA20-201ENST00000384662 132 ntBASIC1.73□□□□□ -2.13
NIPSNAP3AQ9UFN0 RNU6-1067P-201ENST00000384752 107 ntBASIC1.73□□□□□ -2.13
NIPSNAP3AQ9UFN0 MIR570-201ENST00000384917 97 ntBASIC1.73□□□□□ -2.13
NIPSNAP3AQ9UFN0 AL627390.1-201ENST00000396055 340 ntBASIC1.73□□□□□ -2.13
NIPSNAP3AQ9UFN0 RNU7-197P-201ENST00000458836 62 ntBASIC1.73□□□□□ -2.13
NIPSNAP3AQ9UFN0 RPS26P48-201ENST00000491713 339 ntBASIC1.73□□□□□ -2.13
NIPSNAP3AQ9UFN0 SNORD111.1-201ENST00000516421 86 ntBASIC1.73□□□□□ -2.13
NIPSNAP3AQ9UFN0 RNU7-43P-201ENST00000516554 64 ntBASIC1.73□□□□□ -2.13
NIPSNAP3AQ9UFN0 RNU7-70P-201ENST00000516941 66 ntBASIC1.73□□□□□ -2.13
NIPSNAP3AQ9UFN0 MIR3618-201ENST00000580330 88 ntBASIC1.73□□□□□ -2.13
NIPSNAP3AQ9UFN0 ZNF355P-201ENST00000427301 3216 ntBASIC1.72□□□□□ -2.13
NIPSNAP3AQ9UFN0 MIR342-201ENST00000362212 99 ntBASIC1.72□□□□□ -2.13
NIPSNAP3AQ9UFN0 Y_RNA.251-201ENST00000364551 99 ntBASIC1.72□□□□□ -2.13
NIPSNAP3AQ9UFN0 Y_RNA.420-201ENST00000384043 110 ntBASIC1.72□□□□□ -2.13
NIPSNAP3AQ9UFN0 AL445685.2-201ENST00000422551 342 ntBASIC1.72□□□□□ -2.13
NIPSNAP3AQ9UFN0 MIR4764-201ENST00000580680 88 ntBASIC1.72□□□□□ -2.13
NIPSNAP3AQ9UFN0 AL357312.1-201ENST00000603879 298 ntBASIC1.72□□□□□ -2.13
NIPSNAP3AQ9UFN0 GHRLOS.1-201ENST00000610995 70 ntBASIC1.72□□□□□ -2.13
NIPSNAP3AQ9UFN0 MIR7843-201ENST00000622274 79 ntBASIC1.72□□□□□ -2.13
NIPSNAP3AQ9UFN0 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.72□□□□□ -2.13
NIPSNAP3AQ9UFN0 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
NIPSNAP3AQ9UFN0 Y_RNA.351-201ENST00000365436 96 ntBASIC1.71□□□□□ -2.14
NIPSNAP3AQ9UFN0 Y_RNA.568-201ENST00000384742 113 ntBASIC1.71□□□□□ -2.14
NIPSNAP3AQ9UFN0 MIR613-201ENST00000385248 95 ntBASIC1.71□□□□□ -2.14
NIPSNAP3AQ9UFN0 AC027119.1-201ENST00000440877 241 ntBASIC1.71□□□□□ -2.14
NIPSNAP3AQ9UFN0 RNU7-67P-201ENST00000459003 62 ntBASIC1.71□□□□□ -2.14
NIPSNAP3AQ9UFN0 RPS29P24-201ENST00000486345 171 ntBASIC1.71□□□□□ -2.14
NIPSNAP3AQ9UFN0 RNU6-947P-201ENST00000516264 106 ntBASIC1.71□□□□□ -2.14
NIPSNAP3AQ9UFN0 MIR4422-201ENST00000581938 83 ntBASIC1.71□□□□□ -2.14
NIPSNAP3AQ9UFN0 MIR3124-201ENST00000582636 67 ntBASIC1.71□□□□□ -2.14
NIPSNAP3AQ9UFN0 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
NIPSNAP3AQ9UFN0 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
NIPSNAP3AQ9UFN0 U8.1-201ENST00000362843 134 ntBASIC1.7□□□□□ -2.14
NIPSNAP3AQ9UFN0 SNORA70.7-201ENST00000384159 133 ntBASIC1.7□□□□□ -2.14
NIPSNAP3AQ9UFN0 RNU1-78P-201ENST00000391248 165 ntBASIC1.7□□□□□ -2.14
NIPSNAP3AQ9UFN0 MIR934-201ENST00000401241 83 ntBASIC1.7□□□□□ -2.14
NIPSNAP3AQ9UFN0 AC019129.1-201ENST00000403786 261 ntBASIC1.7□□□□□ -2.14
NIPSNAP3AQ9UFN0 MTATP6P21-201ENST00000440681 189 ntBASIC1.7□□□□□ -2.14
NIPSNAP3AQ9UFN0 RNU6-250P-201ENST00000516958 103 ntBASIC1.7□□□□□ -2.14
NIPSNAP3AQ9UFN0 AP001328.1-201ENST00000528550 176 ntBASIC1.7□□□□□ -2.14
NIPSNAP3AQ9UFN0 AC243994.1-201ENST00000618627 109 ntBASIC1.7□□□□□ -2.14
NIPSNAP3AQ9UFN0 AC091895.1-201ENST00000624494 256 ntBASIC1.7□□□□□ -2.14
NIPSNAP3AQ9UFN0 AC008133.2-201ENST00000624540 351 ntBASIC1.7□□□□□ -2.14
NIPSNAP3AQ9UFN0 AC010332.2-201ENST00000613083 1904 ntBASIC1.7□□□□□ -2.14
NIPSNAP3AQ9UFN0 Y_RNA.120-201ENST00000363304 110 ntBASIC1.69□□□□□ -2.14
NIPSNAP3AQ9UFN0 RNU6-915P-201ENST00000364943 103 ntBASIC1.69□□□□□ -2.14
NIPSNAP3AQ9UFN0 SNORA51.10-201ENST00000384418 136 ntBASIC1.69□□□□□ -2.14
NIPSNAP3AQ9UFN0 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.69□□□□□ -2.14
NIPSNAP3AQ9UFN0 RNU7-96P-201ENST00000459535 64 ntBASIC1.69□□□□□ -2.14
NIPSNAP3AQ9UFN0 RNU7-80P-201ENST00000459562 61 ntBASIC1.69□□□□□ -2.14
NIPSNAP3AQ9UFN0 Y_RNA.686-201ENST00000516548 134 ntBASIC1.69□□□□□ -2.14
NIPSNAP3AQ9UFN0 SCARNA15-202ENST00000516881 127 ntBASIC1.69□□□□□ -2.14
NIPSNAP3AQ9UFN0 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.69□□□□□ -2.14
NIPSNAP3AQ9UFN0 MIR4791-201ENST00000607666 84 ntBASIC1.69□□□□□ -2.14
NIPSNAP3AQ9UFN0 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.69□□□□□ -2.14
NIPSNAP3AQ9UFN0 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
NIPSNAP3AQ9UFN0 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.69□□□□□ -2.14
NIPSNAP3AQ9UFN0 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.69□□□□□ -2.14
NIPSNAP3AQ9UFN0 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.69□□□□□ -2.14
NIPSNAP3AQ9UFN0 MIR302B-201ENST00000362188 73 ntBASIC1.68□□□□□ -2.14
NIPSNAP3AQ9UFN0 Y_RNA.454-201ENST00000384224 113 ntBASIC1.68□□□□□ -2.14
NIPSNAP3AQ9UFN0 RPL31P63-201ENST00000422565 375 ntBASIC1.68□□□□□ -2.14
NIPSNAP3AQ9UFN0 AC003989.2-201ENST00000440224 169 ntBASIC1.68□□□□□ -2.14
NIPSNAP3AQ9UFN0 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 178.9 ms