Protein–RNA interactions for Protein: Q9UEU0

VTI1B, Vesicle transport through interaction with t-SNAREs homolog 1B, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BQ9UEU0 Y_RNA.563-201ENST00000384707 108 ntBASIC2.31□□□□□ -2.04
VTI1BQ9UEU0 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
VTI1BQ9UEU0 AL359511.1-201ENST00000402970 211 ntBASIC2.31□□□□□ -2.04
VTI1BQ9UEU0 snoU13.9-201ENST00000458927 103 ntBASIC2.31□□□□□ -2.04
VTI1BQ9UEU0 RNU2-11P-201ENST00000459191 187 ntBASIC2.31□□□□□ -2.04
VTI1BQ9UEU0 RNU7-53P-201ENST00000516705 60 ntBASIC2.31□□□□□ -2.04
VTI1BQ9UEU0 MIR4764-201ENST00000580680 88 ntBASIC2.31□□□□□ -2.04
VTI1BQ9UEU0 MIR4791-201ENST00000607666 84 ntBASIC2.31□□□□□ -2.04
VTI1BQ9UEU0 AC243994.1-201ENST00000618627 109 ntBASIC2.31□□□□□ -2.04
VTI1BQ9UEU0 MIR1291-201ENST00000627649 87 ntBASIC2.31□□□□□ -2.04
VTI1BQ9UEU0 MIR3914-2-201ENST00000637339 95 ntBASIC2.31□□□□□ -2.04
VTI1BQ9UEU0 Y_RNA.366-201ENST00000365540 102 ntBASIC2.3□□□□□ -2.04
VTI1BQ9UEU0 AL023284.1-201ENST00000403956 276 ntBASIC2.3□□□□□ -2.04
VTI1BQ9UEU0 HMGN2P19-201ENST00000425149 265 ntBASIC2.3□□□□□ -2.04
VTI1BQ9UEU0 RNU7-67P-201ENST00000459003 62 ntBASIC2.3□□□□□ -2.04
VTI1BQ9UEU0 SNORA59A-201ENST00000459326 152 ntBASIC2.3□□□□□ -2.04
VTI1BQ9UEU0 RPL23AP42-201ENST00000471152 471 ntBASIC2.3□□□□□ -2.04
VTI1BQ9UEU0 UBE2DNL-203ENST00000474922 222 ntBASIC2.3□□□□□ -2.04
VTI1BQ9UEU0 IGKV1-22-201ENST00000524313 326 ntBASIC2.3□□□□□ -2.04
VTI1BQ9UEU0 AL096840.1-201ENST00000603287 93 ntBASIC2.3□□□□□ -2.04
VTI1BQ9UEU0 AL513534.2-201ENST00000603836 250 ntBASIC2.3□□□□□ -2.04
VTI1BQ9UEU0 AL137067.1-201ENST00000615933 120 ntBASIC2.3□□□□□ -2.04
VTI1BQ9UEU0 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
VTI1BQ9UEU0 SNORA67.3-201ENST00000384366 140 ntBASIC2.29□□□□□ -2.04
VTI1BQ9UEU0 MIR570-201ENST00000384917 97 ntBASIC2.29□□□□□ -2.04
VTI1BQ9UEU0 MIR520C-201ENST00000385005 87 ntBASIC2.29□□□□□ -2.04
VTI1BQ9UEU0 SNORD41-201ENST00000386967 70 ntBASIC2.29□□□□□ -2.04
VTI1BQ9UEU0 AC005908.1-201ENST00000468701 347 ntBASIC2.29□□□□□ -2.04
VTI1BQ9UEU0 RNU6-781P-201ENST00000516377 101 ntBASIC2.29□□□□□ -2.04
VTI1BQ9UEU0 RNU6-250P-201ENST00000516958 103 ntBASIC2.29□□□□□ -2.04
VTI1BQ9UEU0 MIR8063-201ENST00000621930 81 ntBASIC2.29□□□□□ -2.04
VTI1BQ9UEU0 AC008133.2-201ENST00000624540 351 ntBASIC2.29□□□□□ -2.04
VTI1BQ9UEU0 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
VTI1BQ9UEU0 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
VTI1BQ9UEU0 MIR302D-201ENST00000362275 68 ntBASIC2.28□□□□□ -2.04
VTI1BQ9UEU0 SNORA51.10-201ENST00000384418 136 ntBASIC2.28□□□□□ -2.04
VTI1BQ9UEU0 SNORA67.4-201ENST00000384688 142 ntBASIC2.28□□□□□ -2.04
VTI1BQ9UEU0 RNU7-73P-201ENST00000458743 63 ntBASIC2.28□□□□□ -2.04
VTI1BQ9UEU0 AC104435.1-201ENST00000483483 166 ntBASIC2.28□□□□□ -2.04
VTI1BQ9UEU0 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.28□□□□□ -2.04
VTI1BQ9UEU0 AC026436.1-201ENST00000510537 270 ntBASIC2.28□□□□□ -2.04
VTI1BQ9UEU0 SNORD111.1-201ENST00000516421 86 ntBASIC2.28□□□□□ -2.04
VTI1BQ9UEU0 RNU6-922P-201ENST00000516753 99 ntBASIC2.28□□□□□ -2.04
VTI1BQ9UEU0 RNU6-958P-201ENST00000516995 106 ntBASIC2.28□□□□□ -2.04
VTI1BQ9UEU0 SNORD53-201ENST00000579969 78 ntBASIC2.28□□□□□ -2.04
VTI1BQ9UEU0 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
VTI1BQ9UEU0 MIRLET7F2-201ENST00000385277 83 ntBASIC2.27□□□□□ -2.05
VTI1BQ9UEU0 SNORA31.4-201ENST00000516049 129 ntBASIC2.27□□□□□ -2.05
VTI1BQ9UEU0 MIR3198-2-201ENST00000577868 80 ntBASIC2.27□□□□□ -2.05
VTI1BQ9UEU0 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.27□□□□□ -2.05
VTI1BQ9UEU0 U6.95-201ENST00000636931 70 ntBASIC2.27□□□□□ -2.05
VTI1BQ9UEU0 WWP1P1-201ENST00000466609 2769 ntBASIC2.27□□□□□ -2.05
VTI1BQ9UEU0 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
VTI1BQ9UEU0 RNU6-1290P-201ENST00000362957 109 ntBASIC2.26□□□□□ -2.05
VTI1BQ9UEU0 MIR676-201ENST00000390702 67 ntBASIC2.26□□□□□ -2.05
VTI1BQ9UEU0 RNU6-735P-201ENST00000410612 107 ntBASIC2.26□□□□□ -2.05
VTI1BQ9UEU0 Y_RNA.629-201ENST00000411368 105 ntBASIC2.26□□□□□ -2.05
VTI1BQ9UEU0 HSPE1P24-201ENST00000450782 238 ntBASIC2.26□□□□□ -2.05
VTI1BQ9UEU0 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC2.26□□□□□ -2.05
VTI1BQ9UEU0 AL357312.1-201ENST00000603879 298 ntBASIC2.26□□□□□ -2.05
VTI1BQ9UEU0 AC021443.1-201ENST00000604478 211 ntBASIC2.26□□□□□ -2.05
VTI1BQ9UEU0 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.26□□□□□ -2.05
VTI1BQ9UEU0 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
VTI1BQ9UEU0 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
VTI1BQ9UEU0 MIR449A-201ENST00000362113 91 ntBASIC2.25□□□□□ -2.05
VTI1BQ9UEU0 Y_RNA.273-201ENST00000364703 102 ntBASIC2.25□□□□□ -2.05
VTI1BQ9UEU0 RNU4-16P-201ENST00000364737 141 ntBASIC2.25□□□□□ -2.05
VTI1BQ9UEU0 Y_RNA.630-201ENST00000411370 108 ntBASIC2.25□□□□□ -2.05
VTI1BQ9UEU0 RNA5SP24-201ENST00000516478 95 ntBASIC2.25□□□□□ -2.05
VTI1BQ9UEU0 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
VTI1BQ9UEU0 MIR6766-201ENST00000622641 72 ntBASIC2.25□□□□□ -2.05
VTI1BQ9UEU0 AC021613.1-201ENST00000623880 111 ntBASIC2.25□□□□□ -2.05
VTI1BQ9UEU0 RNU4-82P-201ENST00000362443 140 ntBASIC2.24□□□□□ -2.05
VTI1BQ9UEU0 RNA5SP37-201ENST00000365420 130 ntBASIC2.24□□□□□ -2.05
VTI1BQ9UEU0 RNA5SP136-201ENST00000410906 107 ntBASIC2.24□□□□□ -2.05
VTI1BQ9UEU0 snoU13.16-201ENST00000459350 104 ntBASIC2.24□□□□□ -2.05
VTI1BQ9UEU0 MIR3683-201ENST00000580847 82 ntBASIC2.24□□□□□ -2.05
VTI1BQ9UEU0 MIR5007-201ENST00000583098 95 ntBASIC2.24□□□□□ -2.05
VTI1BQ9UEU0 HSPE1P19-201ENST00000603327 295 ntBASIC2.24□□□□□ -2.05
VTI1BQ9UEU0 AC103810.6-201ENST00000606708 136 ntBASIC2.24□□□□□ -2.05
VTI1BQ9UEU0 AC025166.1-201ENST00000612411 163 ntBASIC2.24□□□□□ -2.05
VTI1BQ9UEU0 AC092881.1-201ENST00000638218 2733 ntBASIC2.24□□□□□ -2.05
VTI1BQ9UEU0 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.23□□□□□ -2.05
VTI1BQ9UEU0 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.23□□□□□ -2.05
VTI1BQ9UEU0 RNU6-834P-201ENST00000362367 110 ntBASIC2.23□□□□□ -2.05
VTI1BQ9UEU0 Y_RNA.346-201ENST00000365385 112 ntBASIC2.23□□□□□ -2.05
VTI1BQ9UEU0 Y_RNA.353-201ENST00000365440 108 ntBASIC2.23□□□□□ -2.05
VTI1BQ9UEU0 RNU6-913P-201ENST00000390913 95 ntBASIC2.23□□□□□ -2.05
VTI1BQ9UEU0 MIR1263-201ENST00000408324 86 ntBASIC2.23□□□□□ -2.05
VTI1BQ9UEU0 MIR4305-201ENST00000583252 102 ntBASIC2.23□□□□□ -2.05
VTI1BQ9UEU0 GHRLOS.1-201ENST00000610995 70 ntBASIC2.23□□□□□ -2.05
VTI1BQ9UEU0 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.22□□□□□ -2.05
VTI1BQ9UEU0 AP000648.3-201ENST00000623539 4507 ntBASIC2.22□□□□□ -2.05
VTI1BQ9UEU0 SNORD33-201ENST00000362761 85 ntBASIC2.22□□□□□ -2.05
VTI1BQ9UEU0 SNORD1A-201ENST00000364968 72 ntBASIC2.22□□□□□ -2.05
VTI1BQ9UEU0 RNA5SP261-201ENST00000410536 106 ntBASIC2.22□□□□□ -2.05
VTI1BQ9UEU0 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.22□□□□□ -2.05
VTI1BQ9UEU0 RNU7-41P-201ENST00000515917 61 ntBASIC2.22□□□□□ -2.05
VTI1BQ9UEU0 MIR514B-201ENST00000516774 80 ntBASIC2.22□□□□□ -2.05
VTI1BQ9UEU0 DNAJC19P9-201ENST00000555084 351 ntBASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 552.8 ms