Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
COL20A1Q9P218 AL121890.5-201ENST00000620848 304 ntBASIC1.66□□□□□ -2.14
COL20A1Q9P218 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
COL20A1Q9P218 SNORD115-28-201ENST00000363931 81 ntBASIC1.65□□□□□ -2.15
COL20A1Q9P218 SNORD61-201ENST00000384252 73 ntBASIC1.65□□□□□ -2.15
COL20A1Q9P218 Y_RNA.547-201ENST00000384654 119 ntBASIC1.65□□□□□ -2.15
COL20A1Q9P218 RNU5E-9P-201ENST00000411164 104 ntBASIC1.65□□□□□ -2.15
COL20A1Q9P218 SNORA18.7-201ENST00000516910 131 ntBASIC1.65□□□□□ -2.15
COL20A1Q9P218 RNU6-902P-201ENST00000517212 91 ntBASIC1.65□□□□□ -2.15
COL20A1Q9P218 MIR4421-201ENST00000578133 69 ntBASIC1.65□□□□□ -2.15
COL20A1Q9P218 MIR4285-201ENST00000581001 85 ntBASIC1.65□□□□□ -2.15
COL20A1Q9P218 MIR4781-201ENST00000585250 76 ntBASIC1.65□□□□□ -2.15
COL20A1Q9P218 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
COL20A1Q9P218 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
COL20A1Q9P218 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.65□□□□□ -2.15
COL20A1Q9P218 ZNF209P-201ENST00000593450 2304 ntBASIC1.65□□□□□ -2.15
COL20A1Q9P218 Y_RNA.337-201ENST00000365312 102 ntBASIC1.64□□□□□ -2.15
COL20A1Q9P218 Y_RNA.464-201ENST00000384282 110 ntBASIC1.64□□□□□ -2.15
COL20A1Q9P218 MIR320A-201ENST00000385302 82 ntBASIC1.64□□□□□ -2.15
COL20A1Q9P218 AC006461.1-201ENST00000412637 326 ntBASIC1.64□□□□□ -2.15
COL20A1Q9P218 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.64□□□□□ -2.15
COL20A1Q9P218 SNORD123-201ENST00000459473 70 ntBASIC1.64□□□□□ -2.15
COL20A1Q9P218 AC074198.2-201ENST00000508153 258 ntBASIC1.64□□□□□ -2.15
COL20A1Q9P218 RNU7-43P-201ENST00000516554 64 ntBASIC1.64□□□□□ -2.15
COL20A1Q9P218 RNU7-121P-201ENST00000516604 62 ntBASIC1.64□□□□□ -2.15
COL20A1Q9P218 AC134878.1-201ENST00000619901 243 ntBASIC1.64□□□□□ -2.15
COL20A1Q9P218 RNU6-978P-201ENST00000364371 103 ntBASIC1.63□□□□□ -2.15
COL20A1Q9P218 Y_RNA.272-201ENST00000364696 102 ntBASIC1.63□□□□□ -2.15
COL20A1Q9P218 RNU6-597P-201ENST00000365620 102 ntBASIC1.63□□□□□ -2.15
COL20A1Q9P218 RNU6-209P-201ENST00000384118 107 ntBASIC1.63□□□□□ -2.15
COL20A1Q9P218 Y_RNA.542-201ENST00000384641 111 ntBASIC1.63□□□□□ -2.15
COL20A1Q9P218 U8.17-201ENST00000391292 132 ntBASIC1.63□□□□□ -2.15
COL20A1Q9P218 RNU6-394P-201ENST00000410735 107 ntBASIC1.63□□□□□ -2.15
COL20A1Q9P218 RPL39P39-201ENST00000455840 151 ntBASIC1.63□□□□□ -2.15
COL20A1Q9P218 AC107297.1-201ENST00000459991 176 ntBASIC1.63□□□□□ -2.15
COL20A1Q9P218 RNU6-1270P-201ENST00000517128 108 ntBASIC1.63□□□□□ -2.15
COL20A1Q9P218 MIR337-201ENST00000362281 93 ntBASIC1.62□□□□□ -2.15
COL20A1Q9P218 SNORA7.1-201ENST00000363750 139 ntBASIC1.62□□□□□ -2.15
COL20A1Q9P218 Y_RNA.393-201ENST00000383936 102 ntBASIC1.62□□□□□ -2.15
COL20A1Q9P218 Y_RNA.410-201ENST00000383992 113 ntBASIC1.62□□□□□ -2.15
COL20A1Q9P218 Y_RNA.521-201ENST00000384560 114 ntBASIC1.62□□□□□ -2.15
COL20A1Q9P218 MIR548A2-201ENST00000384956 97 ntBASIC1.62□□□□□ -2.15
COL20A1Q9P218 MIR518F-201ENST00000384973 87 ntBASIC1.62□□□□□ -2.15
COL20A1Q9P218 SNORD41-201ENST00000386967 70 ntBASIC1.62□□□□□ -2.15
COL20A1Q9P218 Y_RNA.580-201ENST00000391004 95 ntBASIC1.62□□□□□ -2.15
COL20A1Q9P218 AC009474.2-201ENST00000451383 136 ntBASIC1.62□□□□□ -2.15
COL20A1Q9P218 RNU4-57P-201ENST00000515980 135 ntBASIC1.62□□□□□ -2.15
COL20A1Q9P218 RNU6-1212P-201ENST00000517023 104 ntBASIC1.62□□□□□ -2.15
COL20A1Q9P218 AC007751.1-201ENST00000529260 376 ntBASIC1.62□□□□□ -2.15
COL20A1Q9P218 AL512310.8-201ENST00000550183 120 ntBASIC1.62□□□□□ -2.15
COL20A1Q9P218 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.62□□□□□ -2.15
COL20A1Q9P218 MIR3664-201ENST00000579074 99 ntBASIC1.62□□□□□ -2.15
COL20A1Q9P218 AL365205.2-201ENST00000594586 68 ntBASIC1.62□□□□□ -2.15
COL20A1Q9P218 MIR520C-201ENST00000385005 87 ntBASIC1.61□□□□□ -2.15
COL20A1Q9P218 RPS27P16-201ENST00000425758 201 ntBASIC1.61□□□□□ -2.15
COL20A1Q9P218 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.61□□□□□ -2.15
COL20A1Q9P218 TRMT112P2-201ENST00000512910 132 ntBASIC1.61□□□□□ -2.15
COL20A1Q9P218 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.61□□□□□ -2.15
COL20A1Q9P218 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
COL20A1Q9P218 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
COL20A1Q9P218 Y_RNA.37-201ENST00000362606 108 ntBASIC1.6□□□□□ -2.15
COL20A1Q9P218 SNORA25.7-201ENST00000364375 127 ntBASIC1.6□□□□□ -2.15
COL20A1Q9P218 Y_RNA.370-201ENST00000365589 108 ntBASIC1.6□□□□□ -2.15
COL20A1Q9P218 RNU6-1292P-201ENST00000383856 107 ntBASIC1.6□□□□□ -2.15
COL20A1Q9P218 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.6□□□□□ -2.15
COL20A1Q9P218 SNORD111.1-201ENST00000516421 86 ntBASIC1.6□□□□□ -2.15
COL20A1Q9P218 RNU1-92P-201ENST00000517017 135 ntBASIC1.6□□□□□ -2.15
COL20A1Q9P218 MIR3646-201ENST00000578301 84 ntBASIC1.6□□□□□ -2.15
COL20A1Q9P218 MIR4764-201ENST00000580680 88 ntBASIC1.6□□□□□ -2.15
COL20A1Q9P218 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.6□□□□□ -2.15
COL20A1Q9P218 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.6□□□□□ -2.15
COL20A1Q9P218 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.59□□□□□ -2.15
COL20A1Q9P218 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.59□□□□□ -2.15
COL20A1Q9P218 U8.1-201ENST00000362843 134 ntBASIC1.59□□□□□ -2.15
COL20A1Q9P218 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.59□□□□□ -2.15
COL20A1Q9P218 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
COL20A1Q9P218 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.59□□□□□ -2.15
COL20A1Q9P218 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.59□□□□□ -2.15
COL20A1Q9P218 DNAJC19P2-201ENST00000593340 302 ntBASIC1.59□□□□□ -2.15
COL20A1Q9P218 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
COL20A1Q9P218 Y_RNA.226-201ENST00000364337 114 ntBASIC1.58□□□□□ -2.16
COL20A1Q9P218 Y_RNA.327-201ENST00000365201 102 ntBASIC1.58□□□□□ -2.16
COL20A1Q9P218 SNORA40.5-201ENST00000391061 128 ntBASIC1.58□□□□□ -2.16
COL20A1Q9P218 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.58□□□□□ -2.16
COL20A1Q9P218 MIR1287-201ENST00000408492 90 ntBASIC1.58□□□□□ -2.16
COL20A1Q9P218 RPS29P29-201ENST00000456396 171 ntBASIC1.58□□□□□ -2.16
COL20A1Q9P218 RNU7-181P-201ENST00000517234 74 ntBASIC1.58□□□□□ -2.16
COL20A1Q9P218 MIR3144-201ENST00000579460 79 ntBASIC1.58□□□□□ -2.16
COL20A1Q9P218 MIR548AR-201ENST00000582191 57 ntBASIC1.58□□□□□ -2.16
COL20A1Q9P218 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.57□□□□□ -2.16
COL20A1Q9P218 SNORD115-34-201ENST00000362441 82 ntBASIC1.57□□□□□ -2.16
COL20A1Q9P218 SNORD115-12-201ENST00000362583 82 ntBASIC1.57□□□□□ -2.16
COL20A1Q9P218 SNORD115-29-201ENST00000362834 82 ntBASIC1.57□□□□□ -2.16
COL20A1Q9P218 SNORD115-9-201ENST00000362912 82 ntBASIC1.57□□□□□ -2.16
COL20A1Q9P218 SNORD115-21-201ENST00000362963 81 ntBASIC1.57□□□□□ -2.16
COL20A1Q9P218 SNORD115-14-201ENST00000363090 81 ntBASIC1.57□□□□□ -2.16
COL20A1Q9P218 SNORD115-13-201ENST00000363358 82 ntBASIC1.57□□□□□ -2.16
COL20A1Q9P218 SNORD115-41-201ENST00000363608 82 ntBASIC1.57□□□□□ -2.16
COL20A1Q9P218 SNORD115-11-201ENST00000363616 82 ntBASIC1.57□□□□□ -2.16
COL20A1Q9P218 SNORD115-5-201ENST00000363633 82 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 167.1 ms