Protein–RNA interactions for Protein: Q9NY93

DDX56, Probable ATP-dependent RNA helicase DDX56, humanhuman

Known RBP Predictions only

Length 547 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56Q9NY93 SNORA80D-201ENST00000384488 135 ntBASIC1.6□□□□□ -2.15
DDX56Q9NY93 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
DDX56Q9NY93 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
DDX56Q9NY93 RNU6-938P-201ENST00000411285 103 ntBASIC1.6□□□□□ -2.15
DDX56Q9NY93 RNU2-64P-201ENST00000411315 191 ntBASIC1.6□□□□□ -2.15
DDX56Q9NY93 SNORD116-25-201ENST00000516517 92 ntBASIC1.6□□□□□ -2.15
DDX56Q9NY93 AC134878.1-201ENST00000619901 243 ntBASIC1.6□□□□□ -2.15
DDX56Q9NY93 MIR4251-201ENST00000635819 61 ntBASIC1.6□□□□□ -2.15
DDX56Q9NY93 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
DDX56Q9NY93 RNU6-978P-201ENST00000364371 103 ntBASIC1.59□□□□□ -2.15
DDX56Q9NY93 SNORA70.7-201ENST00000384159 133 ntBASIC1.59□□□□□ -2.15
DDX56Q9NY93 SNORA51.10-201ENST00000384418 136 ntBASIC1.59□□□□□ -2.15
DDX56Q9NY93 Y_RNA.494-201ENST00000384432 111 ntBASIC1.59□□□□□ -2.15
DDX56Q9NY93 MIR517C-201ENST00000385103 95 ntBASIC1.59□□□□□ -2.15
DDX56Q9NY93 RNU6-907P-201ENST00000390924 102 ntBASIC1.59□□□□□ -2.15
DDX56Q9NY93 MIR1289-2-201ENST00000408360 111 ntBASIC1.59□□□□□ -2.15
DDX56Q9NY93 RNU7-41P-201ENST00000515917 61 ntBASIC1.59□□□□□ -2.15
DDX56Q9NY93 SNORD36C-201ENST00000516733 66 ntBASIC1.59□□□□□ -2.15
DDX56Q9NY93 MIR3129-201ENST00000581095 76 ntBASIC1.59□□□□□ -2.15
DDX56Q9NY93 MIR7843-201ENST00000622274 79 ntBASIC1.59□□□□□ -2.15
DDX56Q9NY93 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
DDX56Q9NY93 Y_RNA.357-201ENST00000365487 109 ntBASIC1.58□□□□□ -2.16
DDX56Q9NY93 Y_RNA.521-201ENST00000384560 114 ntBASIC1.58□□□□□ -2.16
DDX56Q9NY93 MIR320A-201ENST00000385302 82 ntBASIC1.58□□□□□ -2.16
DDX56Q9NY93 MIR1304-201ENST00000408243 91 ntBASIC1.58□□□□□ -2.16
DDX56Q9NY93 RNU5E-9P-201ENST00000411164 104 ntBASIC1.58□□□□□ -2.16
DDX56Q9NY93 AL591704.2-201ENST00000421658 181 ntBASIC1.58□□□□□ -2.16
DDX56Q9NY93 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.58□□□□□ -2.16
DDX56Q9NY93 RNU7-40P-201ENST00000516397 64 ntBASIC1.58□□□□□ -2.16
DDX56Q9NY93 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.58□□□□□ -2.16
DDX56Q9NY93 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.58□□□□□ -2.16
DDX56Q9NY93 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.57□□□□□ -2.16
DDX56Q9NY93 SNORD115-34-201ENST00000362441 82 ntBASIC1.57□□□□□ -2.16
DDX56Q9NY93 SNORD115-12-201ENST00000362583 82 ntBASIC1.57□□□□□ -2.16
DDX56Q9NY93 SNORD115-29-201ENST00000362834 82 ntBASIC1.57□□□□□ -2.16
DDX56Q9NY93 SNORD115-9-201ENST00000362912 82 ntBASIC1.57□□□□□ -2.16
DDX56Q9NY93 SNORD115-21-201ENST00000362963 81 ntBASIC1.57□□□□□ -2.16
DDX56Q9NY93 SNORD115-14-201ENST00000363090 81 ntBASIC1.57□□□□□ -2.16
DDX56Q9NY93 RNA5SP264-201ENST00000363115 107 ntBASIC1.57□□□□□ -2.16
DDX56Q9NY93 SNORD115-13-201ENST00000363358 82 ntBASIC1.57□□□□□ -2.16
DDX56Q9NY93 Y_RNA.150-201ENST00000363562 102 ntBASIC1.57□□□□□ -2.16
DDX56Q9NY93 SNORD115-41-201ENST00000363608 82 ntBASIC1.57□□□□□ -2.16
DDX56Q9NY93 SNORD115-11-201ENST00000363616 82 ntBASIC1.57□□□□□ -2.16
DDX56Q9NY93 SNORD115-5-201ENST00000363633 82 ntBASIC1.57□□□□□ -2.16
DDX56Q9NY93 SNORD115-39-201ENST00000363694 82 ntBASIC1.57□□□□□ -2.16
DDX56Q9NY93 SNORD115-4-201ENST00000363810 82 ntBASIC1.57□□□□□ -2.16
DDX56Q9NY93 SNORD115-16-201ENST00000363887 82 ntBASIC1.57□□□□□ -2.16
DDX56Q9NY93 SNORD115-6-201ENST00000363942 82 ntBASIC1.57□□□□□ -2.16
DDX56Q9NY93 SNORD115-42-201ENST00000364273 82 ntBASIC1.57□□□□□ -2.16
DDX56Q9NY93 Y_RNA.241-201ENST00000364470 117 ntBASIC1.57□□□□□ -2.16
DDX56Q9NY93 SNORD115-15-201ENST00000364809 81 ntBASIC1.57□□□□□ -2.16
DDX56Q9NY93 SNORD115-1-201ENST00000364961 82 ntBASIC1.57□□□□□ -2.16
DDX56Q9NY93 SNORD115-26-201ENST00000365067 82 ntBASIC1.57□□□□□ -2.16
DDX56Q9NY93 SNORD115-10-201ENST00000365073 81 ntBASIC1.57□□□□□ -2.16
DDX56Q9NY93 SNORD115-43-201ENST00000365503 82 ntBASIC1.57□□□□□ -2.16
DDX56Q9NY93 SNORD115-36-201ENST00000365629 82 ntBASIC1.57□□□□□ -2.16
DDX56Q9NY93 MIR618-201ENST00000385287 98 ntBASIC1.57□□□□□ -2.16
DDX56Q9NY93 SNORD77.3-201ENST00000391113 65 ntBASIC1.57□□□□□ -2.16
DDX56Q9NY93 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.57□□□□□ -2.16
DDX56Q9NY93 AP003484.1-201ENST00000530974 250 ntBASIC1.57□□□□□ -2.16
DDX56Q9NY93 PRELID3BP2-201ENST00000605362 201 ntBASIC1.57□□□□□ -2.16
DDX56Q9NY93 SNORD115-40-201ENST00000606510 82 ntBASIC1.57□□□□□ -2.16
DDX56Q9NY93 FTX_2.1-201ENST00000618816 94 ntBASIC1.57□□□□□ -2.16
DDX56Q9NY93 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
DDX56Q9NY93 MIR103A2-201ENST00000362154 78 ntBASIC1.56□□□□□ -2.16
DDX56Q9NY93 snoU13.25-201ENST00000458945 104 ntBASIC1.56□□□□□ -2.16
DDX56Q9NY93 RPS26P48-201ENST00000491713 339 ntBASIC1.56□□□□□ -2.16
DDX56Q9NY93 AC107027.2-201ENST00000512197 115 ntBASIC1.56□□□□□ -2.16
DDX56Q9NY93 RNU11-2P-201ENST00000516898 142 ntBASIC1.56□□□□□ -2.16
DDX56Q9NY93 SNORD53B-201ENST00000577887 78 ntBASIC1.56□□□□□ -2.16
DDX56Q9NY93 RNU4-84P-201ENST00000364200 139 ntBASIC1.55□□□□□ -2.16
DDX56Q9NY93 Y_RNA.270-201ENST00000364693 104 ntBASIC1.55□□□□□ -2.16
DDX56Q9NY93 SNORA40.5-201ENST00000391061 128 ntBASIC1.55□□□□□ -2.16
DDX56Q9NY93 RNU6-955P-201ENST00000410497 104 ntBASIC1.55□□□□□ -2.16
DDX56Q9NY93 CYCSP49-201ENST00000420810 319 ntBASIC1.55□□□□□ -2.16
DDX56Q9NY93 snoU13.23-201ENST00000458863 104 ntBASIC1.55□□□□□ -2.16
DDX56Q9NY93 SNORD79.1-201ENST00000516069 84 ntBASIC1.55□□□□□ -2.16
DDX56Q9NY93 RNU6-548P-201ENST00000517083 115 ntBASIC1.55□□□□□ -2.16
DDX56Q9NY93 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.55□□□□□ -2.16
DDX56Q9NY93 AL365205.2-201ENST00000594586 68 ntBASIC1.55□□□□□ -2.16
DDX56Q9NY93 MIR4791-201ENST00000607666 84 ntBASIC1.55□□□□□ -2.16
DDX56Q9NY93 RNA5SP190-201ENST00000365222 118 ntBASIC1.54□□□□□ -2.16
DDX56Q9NY93 RNU6-1336P-201ENST00000383886 109 ntBASIC1.54□□□□□ -2.16
DDX56Q9NY93 RNU6-1189P-201ENST00000383958 107 ntBASIC1.54□□□□□ -2.16
DDX56Q9NY93 Y_RNA.410-201ENST00000383992 113 ntBASIC1.54□□□□□ -2.16
DDX56Q9NY93 RNU6-939P-201ENST00000384634 107 ntBASIC1.54□□□□□ -2.16
DDX56Q9NY93 Y_RNA.542-201ENST00000384641 111 ntBASIC1.54□□□□□ -2.16
DDX56Q9NY93 RNU6-768P-201ENST00000384683 107 ntBASIC1.54□□□□□ -2.16
DDX56Q9NY93 RNU6-239P-201ENST00000390990 99 ntBASIC1.54□□□□□ -2.16
DDX56Q9NY93 SNORA18.4-201ENST00000516440 124 ntBASIC1.54□□□□□ -2.16
DDX56Q9NY93 AC243994.1-201ENST00000618627 109 ntBASIC1.54□□□□□ -2.16
DDX56Q9NY93 AC027335.2-201ENST00000624030 375 ntBASIC1.54□□□□□ -2.16
DDX56Q9NY93 MIR376A2-201ENST00000636782 80 ntBASIC1.54□□□□□ -2.16
DDX56Q9NY93 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.54□□□□□ -2.16
DDX56Q9NY93 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
DDX56Q9NY93 RNU1-42P-201ENST00000364033 160 ntBASIC1.53□□□□□ -2.16
DDX56Q9NY93 Y_RNA.337-201ENST00000365312 102 ntBASIC1.53□□□□□ -2.16
DDX56Q9NY93 Y_RNA.441-201ENST00000384123 112 ntBASIC1.53□□□□□ -2.16
DDX56Q9NY93 RNU6-886P-201ENST00000384319 105 ntBASIC1.53□□□□□ -2.16
DDX56Q9NY93 SNORA67.6-201ENST00000391093 99 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 175.8 ms